MGE detailed information
MGE type: Genomic_island MGE length: 19825 bp
Accession: NZ_CP081008 Location: 4183158..4202982 Organism: Escherichia coli strain XL10-gold-ultracompetent Replicon: chromosome
Accession: NZ_CP081008 Location: 4183158..4202982 Organism: Escherichia coli strain XL10-gold-ultracompetent Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K3831_RS20140 (4178849) | 4178849..4180162 | - | 1314 | WP_000460842.1 | PTS sugar transporter subunit IIC SgcC | - |
| K3831_RS20145 (4180174) | 4180174..4180452 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| K3831_RS20150 (4180449) | 4180449..4181570 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| K3831_RS20155 (4181815) | 4181815..4181931 | - | 117 | Protein_3992 | VOC family protein | - |
| K3831_RS20160 (4181969) | 4181969..4182187 | - | 219 | Protein_3993 | hypothetical protein | - |
| K3831_RS20165 (4182356) | 4182356..4183102 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| K3831_RS20170 (4183158) | 4183158..4183703 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| K3831_RS20175 (4183715) | 4183715..4183972 | - | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| K3831_RS23265 (4184463) | 4184463..4184594 | - | 132 | WP_001309182.1 | hypothetical protein | - |
| K3831_RS20185 (4184710) | 4184710..4185950 | + | 1241 | Protein_3998 | helicase YjhR | - |
| K3831_RS23270 (4186218) | 4186218..4186423 | - | 206 | Protein_3999 | HNH endonuclease | - |
| K3831_RS20190 (4186533) | 4186533..4187513 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| K3831_RS20195 (4187578) | 4187578..4188684 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| K3831_RS20200 (4188704) | 4188704..4189420 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| K3831_RS20205 (4190876) | 4190876..4191478 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| K3831_RS20210 (4192134) | 4192134..4192475 | + | 342 | Protein_4004 | ACP S-malonyltransferase | - |
| K3831_RS20215 (4192472) | 4192472..4193458 | + | 987 | WP_000611859.1 | protein YcdU | - |
| K3831_RS20240 (4194515) | 4194515..4195453 | + | 939 | WP_000351317.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
| K3831_RS20245 (4195508) | 4195508..4196245 | + | 738 | WP_000283667.1 | zinc-binding phosphatase | - |
| K3831_RS20250 (4196269) | 4196269..4196823 | + | 555 | WP_001001921.1 | molecular chaperone YcdY | - |
| K3831_RS20255 (4196925) | 4196925..4197416 | + | 492 | WP_001300785.1 | DUF1097 domain-containing protein | - |
| K3831_RS20260 (4197480) | 4197480..4198313 | - | 834 | WP_001189321.1 | Curli production assembly/transport component CsgG | VF |
| K3831_RS20265 (4198340) | 4198340..4198756 | - | 417 | WP_001264088.1 | Curli production assembly/transport component CsgF | VF |
| K3831_RS20270 (4198781) | 4198781..4199170 | - | 390 | WP_000833288.1 | Curli production assembly/transport component CsgE | VF |
| K3831_RS20275 (4199175) | 4199175..4199825 | - | 651 | WP_000481509.1 | CsgBAC operon transcriptional regulatory protein | VF |
| K3831_RS20280 (4200580) | 4200580..4201035 | + | 456 | WP_000791650.1 | Minor curlin subunit | VF |
| K3831_RS20285 (4201076) | 4201076..4201531 | + | 456 | WP_000771437.1 | Major curlin subunit | VF |
| K3831_RS20290 (4201590) | 4201590..4201922 | + | 333 | WP_001094300.1 | Curli assembly protein CsgC | VF |
| K3831_RS20295 (4202043) | 4202043..4202354 | + | 312 | WP_000489587.1 | protein YmdA | - |
| K3831_RS20300 (4202449) | 4202449..4202982 | + | 534 | WP_000857405.1 | O-acetyl-ADP-ribose deacetylase | - |
| K3831_RS20305 (4202924) | 4202924..4204405 | + | 1482 | WP_001307714.1 | cardiolipin synthase ClsC | - |
| K3831_RS20310 (4204413) | 4204413..4205570 | - | 1158 | WP_001070375.1 | glucans biosynthesis protein MdoC | - |
| K3831_RS20315 (4205964) | 4205964..4207499 | + | 1536 | WP_001343212.1 | glucans biosynthesis protein MdoG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|