MGE detailed information
MGE type: Genomic_island MGE length: 10905 bp
Accession: NZ_CP081008 Location: 2930176..2941080 Organism: Escherichia coli strain XL10-gold-ultracompetent Replicon: chromosome
Accession: NZ_CP081008 Location: 2930176..2941080 Organism: Escherichia coli strain XL10-gold-ultracompetent Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K3831_RS13890 (2926345) | 2926345..2927385 | + | 1041 | WP_000628648.1 | HTH-type transcriptional regulator GalS | - |
| K3831_RS13895 (2927665) | 2927665..2928663 | + | 999 | WP_001036964.1 | galactose/glucose ABC transporter substrate-binding protein MglB | - |
| K3831_RS13900 (2928724) | 2928724..2930031 | + | 1308 | Protein_2743 | galactose/methyl galactoside ABC transporter ATP-binding protein MglA | - |
| K3831_RS23145 (2930046) | 2930046..2930168 | - | 123 | Protein_2744 | hypothetical protein | - |
| K3831_RS13905 (2930224) | 2930224..2931162 | - | 939 | Protein_2745 | sulfatase-like hydrolase/transferase | - |
| K3831_RS13910 (2931564) | 2931564..2932325 | - | 762 | WP_000060495.1 | acid stress response transcriptional regulator YdeO | - |
| K3831_RS13915 (2932400) | 2932400..2932597 | - | 198 | WP_000543384.1 | two-component system connector SafA | - |
| K3831_RS13920 (2932845) | 2932845..2935124 | - | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| K3831_RS13925 (2935458) | 2935458..2936372 | - | 915 | WP_046613219.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| K3831_RS13930 (2936431) | 2936431..2936934 | - | 504 | WP_000825452.1 | Protein FimG | VF |
| K3831_RS13935 (2936947) | 2936947..2937477 | - | 531 | WP_000876763.1 | Protein FimF | VF |
| K3831_RS13940 (2937491) | 2937491..2938717 | - | 1227 | Protein_2752 | Outer membrane usher protein FimD | VF |
| K3831_RS13945 (2938972) | 2938972..2939180 | - | 209 | Protein_2753 | AraC family transcriptional regulator | - |
| K3831_RS13950 (2939492) | 2939492..2940814 | - | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| K3831_RS13955 (2940814) | 2940814..2941080 | - | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.002 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.002 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.002 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.005 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.004 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.002 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.002 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.002 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.002 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.002 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.002 |