MGE detailed information
MGE type: Genomic_island MGE length: 29851 bp
Accession: NZ_CP080960 Location: 2994877..3024727 Organism: Salmonella enterica subsp. enterica serovar Typhi strain ISP2825 Replicon: chromosome
Accession: NZ_CP080960 Location: 2994877..3024727 Organism: Salmonella enterica subsp. enterica serovar Typhi strain ISP2825 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K3U68_RS14675 (K3U68_14675) | 2990573..2991436 | - | 864 | WP_001270764.1 | LysR family transcriptional regulator | - |
| K3U68_RS14680 (K3U68_14680) | 2991540..2991995 | + | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| K3U68_RS14685 (K3U68_14685) | 2992137..2993366 | + | 1230 | WP_000036836.1 | amino acid permease | - |
| K3U68_RS14690 (K3U68_14690) | 2993397..2993669 | - | 273 | WP_031624994.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| K3U68_RS14695 (K3U68_14695) | 2993791..2994667 | + | 877 | Protein_2892 | nickel/cobalt efflux protein RcnA | - |
| K3U68_RS14700 (K3U68_14700) | 2994877..2995635 | - | 759 | WP_000134788.1 | transcriptional regulator | - |
| K3U68_RS14705 (K3U68_14705) | 2995622..2996134 | - | 513 | WP_000336256.1 | CaiF/GrlA family transcriptional regulator | - |
| K3U68_RS14710 (K3U68_14710) | 2996279..2997355 | - | 1077 | WP_000141334.1 | hypothetical protein | - |
| K3U68_RS14715 (K3U68_14715) | 2997352..2998095 | - | 744 | WP_000798497.1 | Chaperone protein PapD | VF |
| K3U68_RS14720 (K3U68_14720) | 2998136..3000625 | - | 2490 | WP_000705516.1 | Outer membrane usher protein PapC | VF |
| K3U68_RS14725 (K3U68_14725) | 3000745..3001326 | - | 582 | WP_001244646.1 | putative fimbrial-like protein YbgD | VF |
| K3U68_RS14730 (K3U68_14730) | 3002045..3002677 | - | 633 | WP_000835268.1 | YfdX family protein | - |
| K3U68_RS14735 (K3U68_14735) | 3002724..3003260 | - | 537 | WP_001038500.1 | Attachment invasion locus protein | VF |
| K3U68_RS14740 (K3U68_14740) | 3004067..3004465 | - | 399 | WP_000911334.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| K3U68_RS14745 (K3U68_14745) | 3004465..3004692 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| K3U68_RS14750 (K3U68_14750) | 3004869..3005120 | + | 252 | WP_001540858.1 | hypothetical protein | - |
| K3U68_RS14755 (K3U68_14755) | 3005395..3006201 | + | 807 | WP_077905073.1 | DUF1460 domain-containing protein | - |
| K3U68_RS14760 (K3U68_14760) | 3006834..3007955 | - | 1122 | WP_000028980.1 | hypothetical protein | - |
| K3U68_RS14765 (K3U68_14765) | 3008057..3008512 | - | 456 | WP_223229661.1 | hypothetical protein | - |
| K3U68_RS14770 (K3U68_14770) | 3008595..3008798 | - | 204 | WP_000184036.1 | hypothetical protein | - |
| K3U68_RS14775 (K3U68_14775) | 3008802..3009521 | - | 720 | WP_000082599.1 | Rha family transcriptional regulator | - |
| K3U68_RS14780 (K3U68_14780) | 3010457..3012076 | - | 1620 | WP_014341476.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| K3U68_RS14785 (K3U68_14785) | 3012441..3013040 | - | 600 | WP_016262943.1 | hypothetical protein | - |
| K3U68_RS14790 (K3U68_14790) | 3013040..3013933 | - | 894 | WP_001601654.1 | DUF4747 family protein | - |
| K3U68_RS14795 (K3U68_14795) | 3014265..3014444 | - | 180 | WP_031624997.1 | hypothetical protein | - |
| K3U68_RS14800 (K3U68_14800) | 3014749..3015276 | - | 528 | WP_031624998.1 | hypothetical protein | - |
| K3U68_RS14805 (K3U68_14805) | 3015283..3015954 | - | 672 | WP_004027511.1 | DUF2213 domain-containing protein | - |
| K3U68_RS14810 (K3U68_14810) | 3016019..3016603 | - | 585 | WP_031625000.1 | hypothetical protein | - |
| K3U68_RS14815 (K3U68_14815) | 3016643..3016816 | - | 174 | WP_001224090.1 | hypothetical protein | - |
| K3U68_RS14820 (K3U68_14820) | 3017018..3017305 | - | 288 | WP_031625001.1 | PerC family transcriptional regulator | - |
| K3U68_RS14825 (K3U68_14825) | 3017302..3017832 | - | 531 | WP_004027524.1 | ProQ/FinO family protein | - |
| K3U68_RS14830 (K3U68_14830) | 3017856..3018629 | - | 774 | WP_031625002.1 | hypothetical protein | - |
| K3U68_RS14835 (K3U68_14835) | 3019041..3020453 | - | 1413 | WP_031625003.1 | helicase RepA family protein | - |
| K3U68_RS14840 (K3U68_14840) | 3020450..3020740 | - | 291 | WP_004027526.1 | DUF4222 domain-containing protein | - |
| K3U68_RS14845 (K3U68_14845) | 3020745..3020945 | - | 201 | WP_001421990.1 | hypothetical protein | - |
| K3U68_RS14850 (K3U68_14850) | 3020938..3021303 | - | 366 | WP_031625005.1 | hypothetical protein | - |
| K3U68_RS23610 | 3021296..3022789 | - | 1494 | WP_230374037.1 | host cell division inhibitor Icd-like protein | - |
| K3U68_RS14865 (K3U68_14865) | 3022782..3023582 | - | 801 | WP_001515791.1 | antA/AntB antirepressor family protein | - |
| K3U68_RS14870 (K3U68_14870) | 3023660..3023857 | - | 198 | WP_004027535.1 | AlpA family transcriptional regulator | - |
| K3U68_RS14875 (K3U68_14875) | 3023972..3024727 | - | 756 | WP_016262924.1 | hypothetical protein | - |
| K3U68_RS14880 (K3U68_14880) | 3024856..3026070 | - | 1215 | WP_001603436.1 | tyrosine-type recombinase/integrase | - |
| K3U68_RS14890 (K3U68_14890) | 3026388..3027146 | - | 759 | WP_000244328.1 | amidase activator ActS | - |
| K3U68_RS14895 (K3U68_14895) | 3027411..3027956 | + | 546 | WP_000133998.1 | isopentenyl-diphosphate Delta-isomerase | - |
| K3U68_RS14900 (K3U68_14900) | 3028032..3029549 | - | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|