MGE detailed information
MGE type: Prophage MGE length: 43775 bp
Accession: NZ_CP080770 Location: 1975585..2019359 Organism: Staphylococcus aureus strain HL23187 Replicon: chromosome
Accession: NZ_CP080770 Location: 1975585..2019359 Organism: Staphylococcus aureus strain HL23187 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HLV54_RS09625 (HLV54_001925) | 1970688..1971524 | - | 837 | WP_000960806.1 | hypothetical protein | - |
| HLV54_RS09630 (HLV54_001926) | 1971533..1973050 | - | 1518 | WP_000535839.1 | ABC transporter ATP-binding protein | - |
| HLV54_RS09635 (HLV54_001927) | 1973065..1973379 | - | 315 | WP_000435806.1 | YfhH family protein | - |
| HLV54_RS09640 (HLV54_001928) | 1973357..1974175 | - | 819 | WP_001124417.1 | recombination regulator RecX | - |
| HLV54_RS09645 (HLV54_001929) | 1974436..1975245 | - | 810 | WP_170171880.1 | monofunctional peptidoglycan glycosyltransferase SgtB | - |
| HLV54_RS09650 (HLV54_001930) | 1975585..1976100 | - | 516 | WP_000163284.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| HLV54_RS09655 (HLV54_001931) | 1976230..1976391 | - | 162 | WP_001005407.1 | SE1561 family protein | - |
| HLV54_RS09660 (HLV54_001932) | 1976738..1976818 | + | 81 | WP_100250272.1 | hypothetical protein | - |
| HLV54_RS09665 (HLV54_001933) | 1977144..1977329 | - | 186 | WP_001286805.1 | hypothetical protein | - |
| HLV54_RS09670 (HLV54_001934) | 1977331..1977441 | - | 111 | WP_000139423.1 | hypothetical protein | - |
| HLV54_RS09675 (HLV54_001935) | 1977512..1977664 | - | 153 | WP_001788502.1 | hypothetical protein | - |
| HLV54_RS09680 (HLV54_001936) | 1977907..1979352 | - | 1446 | WP_001148115.1 | SH3 domain-containing protein | - |
| HLV54_RS09685 (HLV54_001937) | 1979333..1979770 | - | 438 | WP_000354129.1 | phage holin | - |
| HLV54_RS09690 (HLV54_001938) | 1979826..1980221 | - | 396 | WP_000398864.1 | hypothetical protein | - |
| HLV54_RS09695 (HLV54_001939) | 1980227..1981465 | - | 1239 | WP_073429844.1 | BppU family phage baseplate upper protein | - |
| HLV54_RS09700 (HLV54_001940) | 1981478..1983352 | - | 1875 | WP_170171881.1 | Bifunctional autolysin | VF |
| HLV54_RS09705 (HLV54_001941) | 1983489..1983788 | - | 300 | WP_000466777.1 | DUF2951 domain-containing protein | - |
| HLV54_RS09710 (HLV54_001942) | 1983829..1984002 | - | 174 | WP_001790193.1 | XkdX family protein | - |
| HLV54_RS09715 (HLV54_001943) | 1984012..1984389 | - | 378 | WP_000705914.1 | DUF2977 domain-containing protein | - |
| HLV54_RS09720 (HLV54_001944) | 1984389..1986212 | - | 1824 | WP_000259612.1 | BppU family phage baseplate upper protein | - |
| HLV54_RS09725 (HLV54_001945) | 1986212..1988110 | - | 1899 | WP_170171882.1 | hypothetical protein | - |
| HLV54_RS09730 (HLV54_001946) | 1988123..1990009 | - | 1887 | WP_170171883.1 | SGNH/GDSL hydrolase family protein | - |
| HLV54_RS09735 (HLV54_001947) | 1990020..1990961 | - | 942 | WP_000560181.1 | phage tail family protein | - |
| HLV54_RS09740 (HLV54_001948) | 1990976..1994119 | - | 3144 | WP_000379454.1 | hypothetical protein | - |
| HLV54_RS09745 (HLV54_001949) | 1994123..1994407 | - | 285 | WP_000880587.1 | hypothetical protein | - |
| HLV54_RS09750 (HLV54_001950) | 1994452..1994958 | - | 507 | WP_031833107.1 | tail assembly chaperone | - |
| HLV54_RS09755 (HLV54_001951) | 1995025..1995582 | - | 558 | WP_000057582.1 | tail protein | - |
| HLV54_RS09760 (HLV54_001952) | 1995583..1996008 | - | 426 | WP_000270192.1 | DUF3168 domain-containing protein | - |
| HLV54_RS09765 (HLV54_001953) | 1996021..1996434 | - | 414 | WP_001151330.1 | HK97 gp10 family phage protein | - |
| HLV54_RS09770 (HLV54_001954) | 1996421..1996756 | - | 336 | WP_000483041.1 | phage head closure protein | - |
| HLV54_RS09775 (HLV54_001955) | 1996768..1997118 | - | 351 | WP_000177351.1 | phage head-tail adapter protein | - |
| HLV54_RS09780 (HLV54_001956) | 1997124..1997267 | - | 144 | WP_000002931.1 | hypothetical protein | - |
| HLV54_RS09785 (HLV54_001957) | 1997279..1998193 | - | 915 | WP_000235168.1 | phage major capsid protein | - |
| HLV54_RS09790 (HLV54_001958) | 1998210..1998794 | - | 585 | WP_001019219.1 | DUF4355 domain-containing protein | - |
| HLV54_RS09795 (HLV54_001959) | 1998897..1999103 | - | 207 | WP_000346033.1 | hypothetical protein | - |
| HLV54_RS09800 (HLV54_001960) | 1999105..2000058 | - | 954 | WP_000184133.1 | phage head morphogenesis protein | - |
| HLV54_RS09805 (HLV54_001961) | 2000027..2001451 | - | 1425 | WP_000177426.1 | phage portal protein | - |
| HLV54_RS09810 (HLV54_001962) | 2001448..2002671 | - | 1224 | WP_001037584.1 | PBSX family phage terminase large subunit | - |
| HLV54_RS09815 (HLV54_001963) | 2002664..2003158 | - | 495 | WP_000594088.1 | terminase small subunit | - |
| HLV54_RS09820 (HLV54_001964) | 2003513..2003914 | - | 402 | WP_000286968.1 | hypothetical protein | - |
| HLV54_RS09825 (HLV54_001965) | 2003915..2004088 | - | 174 | WP_064140002.1 | transcriptional activator RinB | - |
| HLV54_RS09830 (HLV54_001966) | 2004081..2004284 | - | 204 | WP_001072794.1 | hypothetical protein | - |
| HLV54_RS09835 (HLV54_001967) | 2004281..2004475 | - | 195 | WP_000132920.1 | hypothetical protein | - |
| HLV54_RS09840 (HLV54_001968) | 2004472..2004678 | - | 207 | WP_170171884.1 | DUF1381 domain-containing protein | - |
| HLV54_RS09845 (HLV54_001969) | 2004695..2004868 | - | 174 | WP_001209219.1 | hypothetical protein | - |
| HLV54_RS09850 (HLV54_001970) | 2004905..2005438 | - | 534 | WP_000181819.1 | dUTP pyrophosphatase | - |
| HLV54_RS09855 (HLV54_001971) | 2005431..2005673 | - | 243 | WP_000700108.1 | hypothetical protein | - |
| HLV54_RS09860 (HLV54_001972) | 2005663..2005899 | - | 237 | WP_001065103.1 | DUF1024 family protein | - |
| HLV54_RS09865 (HLV54_001973) | 2005892..2006224 | - | 333 | WP_072467505.1 | acetyltransferase | - |
| HLV54_RS09870 (HLV54_001974) | 2006272..2006520 | - | 249 | WP_001126836.1 | phi PVL orf 51-like protein | - |
| HLV54_RS09875 (HLV54_001975) | 2006521..2006880 | - | 360 | WP_000029379.1 | SA1788 family PVL leukocidin-associated protein | - |
| HLV54_RS09880 (HLV54_001976) | 2006881..2007149 | - | 269 | Protein_1913 | helix-turn-helix transcriptional regulator | - |
| HLV54_RS09885 (HLV54_001977) | 2007150..2007335 | - | 186 | WP_001187263.1 | DUF3113 family protein | - |
| HLV54_RS09890 (HLV54_001978) | 2007340..2007744 | - | 405 | WP_000049812.1 | DUF1064 domain-containing protein | - |
| HLV54_RS09895 (HLV54_001979) | 2007755..2007976 | - | 222 | WP_001123688.1 | DUF3269 family protein | - |
| HLV54_RS09900 (HLV54_001980) | 2007989..2008150 | - | 162 | WP_000237153.1 | hypothetical protein | - |
| HLV54_RS09905 (HLV54_001981) | 2008144..2008923 | - | 780 | WP_000803056.1 | ATP-binding protein | - |
| HLV54_RS09910 (HLV54_001982) | 2008934..2009677 | - | 744 | WP_000139436.1 | conserved phage C-terminal domain-containing protein | - |
| HLV54_RS09915 (HLV54_001983) | 2009670..2010434 | - | 765 | WP_000240900.1 | AP2 domain-containing protein | - |
| HLV54_RS09920 (HLV54_001984) | 2010434..2011102 | - | 669 | WP_001121805.1 | putative HNHc nuclease | - |
| HLV54_RS09925 (HLV54_001985) | 2011116..2011544 | - | 429 | WP_103215250.1 | single-stranded DNA-binding protein | - |
| HLV54_RS09930 (HLV54_001986) | 2011544..2012167 | - | 624 | WP_000139720.1 | DUF1071 domain-containing protein | - |
| HLV54_RS09935 (HLV54_001987) | 2012160..2012381 | - | 222 | WP_001077280.1 | DUF2483 family protein | - |
| HLV54_RS09940 (HLV54_001988) | 2012391..2012651 | - | 261 | WP_000291090.1 | DUF1108 family protein | - |
| HLV54_RS09945 (HLV54_001989) | 2012748..2012909 | - | 162 | WP_103215249.1 | DUF1270 family protein | - |
| HLV54_RS09950 (HLV54_001990) | 2012902..2013123 | - | 222 | WP_000594789.1 | hypothetical protein | - |
| HLV54_RS09955 (HLV54_001991) | 2013194..2013424 | + | 231 | WP_000395455.1 | hypothetical protein | - |
| HLV54_RS09960 (HLV54_001992) | 2013600..2014340 | - | 741 | WP_001148589.1 | phage antirepressor KilAC domain-containing protein | - |
| HLV54_RS09965 (HLV54_001993) | 2014342..2014527 | - | 186 | WP_000933365.1 | helix-turn-helix transcriptional regulator | - |
| HLV54_RS09970 (HLV54_001994) | 2014973..2015455 | + | 483 | WP_000394410.1 | hypothetical protein | - |
| HLV54_RS09975 (HLV54_001995) | 2015556..2015735 | - | 180 | WP_000438352.1 | hypothetical protein | - |
| HLV54_RS09980 (HLV54_001996) | 2015749..2015985 | - | 237 | WP_001121116.1 | helix-turn-helix transcriptional regulator | - |
| HLV54_RS09985 (HLV54_001997) | 2016137..2016451 | + | 315 | WP_000333630.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| HLV54_RS09990 (HLV54_001998) | 2016464..2016925 | + | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| HLV54_RS14260 | 2016943..2017077 | + | 135 | WP_001233917.1 | hypothetical protein | - |
| HLV54_RS09995 (HLV54_001999) | 2017109..2018041 | + | 933 | WP_170171885.1 | hypothetical protein | - |
| HLV54_RS10000 (HLV54_002000) | 2018021..2018200 | - | 180 | WP_000337827.1 | hypothetical protein | - |
| HLV54_RS10005 (HLV54_002001) | 2018313..2019359 | + | 1047 | WP_001145722.1 | Putative defective protein IntQ ; Integrase | Integrase |
| HLV54_RS10010 (HLV54_002002) | 2019404..2020549 | + | 1146 | WP_061820372.1 | radical SAM/CxCxxxxC motif protein YfkAB | - |
| HLV54_RS10015 (HLV54_002003) | 2020809..2021339 | - | 531 | WP_000184381.1 | acyl-CoA thioesterase | - |
| HLV54_RS10020 (HLV54_002004) | 2021429..2022685 | - | 1257 | WP_078065149.1 | aminopeptidase | - |
| HLV54_RS10025 (HLV54_002005) | 2022688..2022888 | - | 201 | WP_000180460.1 | DUF1128 family protein | - |
| HLV54_RS10030 (HLV54_002006) | 2023035..2023499 | + | 465 | WP_000228666.1 | low molecular weight protein-tyrosine-phosphatase | - |
| HLV54_RS10035 (HLV54_002007) | 2023506..2023781 | + | 276 | WP_000428172.1 | YtxH domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|