MGE detailed information
MGE type: Prophage MGE length: 67650 bp
Accession: NZ_CP080633 Location: 788043..855692 Organism: Shewanella putrefaciens strain YZ08 Replicon: chromosome
Accession: NZ_CP080633 Location: 788043..855692 Organism: Shewanella putrefaciens strain YZ08 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K2227_RS03520 (K2227_03520) | 783056..783799 | - | 744 | WP_012088245.1 | DUF481 domain-containing protein | - |
| K2227_RS03525 (K2227_03525) | 784012..784407 | + | 396 | WP_006083044.1 | 30S ribosomal protein S6 | - |
| K2227_RS03530 (K2227_03530) | 784416..784721 | + | 306 | WP_220591980.1 | primosomal replication protein N | - |
| K2227_RS03535 (K2227_03535) | 784734..784961 | + | 228 | WP_006083042.1 | 30S ribosomal protein S18 | - |
| K2227_RS03540 (K2227_03540) | 784998..785450 | + | 453 | WP_106649434.1 | 50S ribosomal protein L9 | - |
| K2227_RS03545 (K2227_03545) | 785719..787917 | - | 2199 | WP_220591981.1 | S46 family peptidase | - |
| K2227_RS03550 (K2227_03550) | 788043..789449 | + | 1407 | WP_106649436.1 | replicative DNA helicase | - |
| K2227_RS03555 (K2227_03555) | 789552..790628 | + | 1077 | WP_220591982.1 | alanine racemase | - |
| K2227_RS03560 (K2227_03560) | 791194..791658 | - | 465 | WP_006083037.1 | chemotaxis protein CheX | - |
| K2227_RS03565 (K2227_03565) | 792214..794406 | + | 2193 | WP_220591983.1 | TonB-dependent siderophore receptor | - |
| K2227_RS03570 (K2227_03570) | 794506..795180 | + | 675 | WP_220591984.1 | Fe2+-dependent dioxygenase | - |
| K2227_RS03575 (K2227_03575) | 795617..796102 | + | 486 | WP_220591985.1 | hypothetical protein | - |
| K2227_RS03580 (K2227_03580) | 796257..796907 | + | 651 | WP_259400068.1 | hypothetical protein | - |
| K2227_RS03585 (K2227_03585) | 797058..797636 | + | 579 | WP_220591987.1 | hypothetical protein | - |
| K2227_RS03590 (K2227_03590) | 797809..798186 | + | 378 | WP_220591988.1 | hypothetical protein | - |
| K2227_RS03595 (K2227_03595) | 798386..798790 | + | 405 | WP_220591989.1 | hypothetical protein | - |
| K2227_RS03600 (K2227_03600) | 798925..799281 | + | 357 | WP_220591990.1 | hypothetical protein | - |
| K2227_RS03605 (K2227_03605) | 799448..799717 | + | 270 | WP_012586779.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| K2227_RS03610 (K2227_03610) | 799714..800244 | + | 531 | WP_220591991.1 | GNAT family N-acetyltransferase | Toxin Detail |
| K2227_RS03615 (K2227_03615) | 800628..801179 | + | 552 | WP_220591992.1 | tetratricopeptide repeat protein | - |
| K2227_RS03620 (K2227_03620) | 801262..801546 | + | 285 | WP_220591993.1 | hypothetical protein | - |
| K2227_RS03625 (K2227_03625) | 801651..801974 | + | 324 | WP_220591994.1 | hypothetical protein | - |
| K2227_RS03630 (K2227_03630) | 802042..802362 | - | 321 | WP_220591995.1 | hypothetical protein | - |
| K2227_RS03635 (K2227_03635) | 802359..802590 | - | 232 | Protein_706 | hypothetical protein | - |
| K2227_RS03640 (K2227_03640) | 802587..802850 | - | 264 | WP_220591996.1 | hypothetical protein | - |
| K2227_RS03645 (K2227_03645) | 802851..803144 | - | 294 | WP_012088260.1 | hypothetical protein | - |
| K2227_RS03650 (K2227_03650) | 803141..803839 | - | 699 | WP_220591997.1 | hypothetical protein | - |
| K2227_RS03655 (K2227_03655) | 803836..804426 | - | 591 | WP_220591998.1 | ead/Ea22-like family protein | - |
| K2227_RS03660 (K2227_03660) | 804437..804601 | - | 165 | WP_006083880.1 | hypothetical protein | - |
| K2227_RS03665 (K2227_03665) | 804626..804973 | - | 348 | WP_011847795.1 | hypothetical protein | - |
| K2227_RS03670 (K2227_03670) | 804999..805259 | - | 261 | WP_220591999.1 | pyocin activator PrtN family protein | - |
| K2227_RS03675 (K2227_03675) | 805256..805609 | - | 354 | WP_220592000.1 | hypothetical protein | - |
| K2227_RS03680 (K2227_03680) | 806056..807165 | + | 1110 | WP_220592001.1 | ATP-binding protein | - |
| K2227_RS03685 (K2227_03685) | 807165..809345 | + | 2181 | WP_220592002.1 | S8 family peptidase | - |
| K2227_RS03690 (K2227_03690) | 809385..810140 | - | 756 | WP_220592003.1 | helix-turn-helix transcriptional regulator | - |
| K2227_RS03695 (K2227_03695) | 810270..810509 | + | 240 | WP_220592004.1 | helix-turn-helix transcriptional regulator | - |
| K2227_RS03700 (K2227_03700) | 810540..811148 | + | 609 | WP_220592005.1 | hypothetical protein | - |
| K2227_RS03705 (K2227_03705) | 811313..812062 | + | 750 | WP_220592006.1 | helix-turn-helix domain-containing protein | - |
| K2227_RS03710 (K2227_03710) | 812059..812745 | + | 687 | WP_220592007.1 | replication protein P | - |
| K2227_RS03715 (K2227_03715) | 812735..813991 | + | 1257 | WP_220592008.1 | hypothetical protein ; Integrase | Integrase |
| K2227_RS03720 (K2227_03720) | 814047..814265 | + | 219 | WP_012088273.1 | helix-turn-helix domain-containing protein | - |
| K2227_RS03725 (K2227_03725) | 814252..814605 | + | 354 | WP_220592009.1 | hypothetical protein | - |
| K2227_RS03730 (K2227_03730) | 814614..815228 | + | 615 | WP_220592010.1 | oligoribonuclease | - |
| K2227_RS03735 (K2227_03735) | 815550..816215 | + | 666 | WP_220592011.1 | hypothetical protein | - |
| K2227_RS03740 (K2227_03740) | 816673..817197 | + | 525 | WP_220592012.1 | lysozyme | - |
| K2227_RS22250 | 817187..817690 | + | 504 | WP_259399981.1 | hypothetical protein | - |
| K2227_RS03750 (K2227_03750) | 817873..818157 | + | 285 | WP_259400069.1 | phage holin family protein | - |
| K2227_RS03755 (K2227_03755) | 818111..818644 | + | 534 | WP_220592015.1 | terminase small subunit | - |
| K2227_RS03760 (K2227_03760) | 818619..820616 | + | 1998 | WP_220592016.1 | phage terminase large subunit family protein | - |
| K2227_RS03765 (K2227_03765) | 820646..820852 | + | 207 | WP_012196681.1 | hypothetical protein | - |
| K2227_RS03770 (K2227_03770) | 820903..822477 | + | 1575 | WP_220592017.1 | phage portal protein | - |
| K2227_RS03775 (K2227_03775) | 822386..824455 | + | 2070 | WP_259399982.1 | Clp protease ClpP | - |
| K2227_RS03780 (K2227_03780) | 824536..824859 | + | 324 | WP_012196684.1 | DUF2190 family protein | - |
| K2227_RS03785 (K2227_03785) | 824852..825196 | + | 345 | WP_220592018.1 | hypothetical protein | - |
| K2227_RS03790 (K2227_03790) | 825200..825769 | + | 570 | WP_220592019.1 | hypothetical protein | - |
| K2227_RS03795 (K2227_03795) | 825786..826211 | + | 426 | WP_105251452.1 | hypothetical protein | - |
| K2227_RS03800 (K2227_03800) | 826208..826927 | + | 720 | WP_106649474.1 | hypothetical protein | - |
| K2227_RS03805 (K2227_03805) | 827019..827708 | - | 690 | WP_259399983.1 | Rha family transcriptional regulator | - |
| K2227_RS03810 (K2227_03810) | 828077..832357 | + | 4281 | WP_220592020.1 | phage tail tape measure protein | - |
| K2227_RS03815 (K2227_03815) | 832396..832767 | + | 372 | WP_220592021.1 | hypothetical protein | - |
| K2227_RS03820 (K2227_03820) | 832775..835213 | + | 2439 | WP_220592022.1 | hypothetical protein | - |
| K2227_RS03825 (K2227_03825) | 835227..836228 | + | 1002 | WP_220592023.1 | hypothetical protein | - |
| K2227_RS03830 (K2227_03830) | 836228..836512 | + | 285 | WP_220592024.1 | hypothetical protein | - |
| K2227_RS03835 (K2227_03835) | 836548..836868 | + | 321 | WP_220592025.1 | hypothetical protein | - |
| K2227_RS03840 (K2227_03840) | 836865..837770 | + | 906 | WP_220592026.1 | hypothetical protein | - |
| K2227_RS03845 (K2227_03845) | 838012..839712 | + | 1701 | WP_220592027.1 | hypothetical protein | - |
| K2227_RS03850 (K2227_03850) | 839738..839950 | + | 213 | WP_220592028.1 | hypothetical protein | - |
| K2227_RS03855 (K2227_03855) | 839947..841011 | - | 1065 | WP_220592029.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| K2227_RS03860 (K2227_03860) | 841133..842152 | + | 1020 | WP_220592030.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| K2227_RS03865 (K2227_03865) | 842364..842654 | + | 291 | WP_106649485.1 | hypothetical protein | - |
| K2227_RS03870 (K2227_03870) | 842799..842999 | + | 201 | WP_220592031.1 | PspC domain-containing protein | - |
| K2227_RS03875 (K2227_03875) | 843137..843874 | - | 738 | WP_106649487.1 | enoyl-CoA hydratase | - |
| K2227_RS03880 (K2227_03880) | 843908..844390 | + | 483 | WP_220592032.1 | copper chaperone PCu(A)C | - |
| K2227_RS03885 (K2227_03885) | 844402..845370 | + | 969 | WP_106649489.1 | DUF2333 family protein | - |
| K2227_RS03890 (K2227_03890) | 845373..846110 | + | 738 | WP_220592033.1 | TIGR04219 family outer membrane beta-barrel protein | - |
| K2227_RS03895 (K2227_03895) | 846197..847504 | - | 1308 | WP_006083027.1 | outer membrane channel protein TolC | - |
| K2227_RS03900 (K2227_03900) | 847749..848351 | + | 603 | WP_220592034.1 | ADP-ribose diphosphatase | - |
| K2227_RS03905 (K2227_03905) | 848358..848798 | + | 441 | WP_063882262.1 | DUF1249 domain-containing protein | - |
| K2227_RS03910 (K2227_03910) | 848814..849653 | + | 840 | WP_220592035.1 | 3',5'-cyclic-AMP phosphodiesterase | - |
| K2227_RS03915 (K2227_03915) | 849680..850255 | + | 576 | WP_220592036.1 | YqiA/YcfP family alpha/beta fold hydrolase | - |
| K2227_RS03920 (K2227_03920) | 850312..852198 | + | 1887 | WP_106649494.1 | DNA topoisomerase IV subunit B | - |
| K2227_RS03925 (K2227_03925) | 852251..853423 | + | 1173 | WP_220592037.1 | PQQ-dependent sugar dehydrogenase | - |
| K2227_RS03930 (K2227_03930) | 853416..855692 | + | 2277 | WP_220592038.1 | DNA topoisomerase IV subunit A | - |
| K2227_RS03935 (K2227_03935) | 855868..856932 | - | 1065 | WP_220592039.1 | porin | - |
| K2227_RS03940 (K2227_03940) | 857368..858432 | - | 1065 | WP_220592040.1 | porin | - |
| K2227_RS03945 (K2227_03945) | 858859..859668 | + | 810 | WP_220592041.1 | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|