MGE detailed information
MGE type: Prophage MGE length: 12751 bp
Accession: NZ_CP080620 Location: 4361447..4374197 Organism: Escherichia coli strain TOP10 Replicon: chromosome
Accession: NZ_CP080620 Location: 4361447..4374197 Organism: Escherichia coli strain TOP10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K3F56_RS20920 (4358084) | 4358084..4358347 | - | 264 | WP_000557378.1 | chaperone NapD | - |
| K3F56_RS20925 (4358337) | 4358337..4358831 | - | 495 | WP_000686723.1 | ferredoxin-type protein NapF | - |
| K3F56_RS20930 (4358940) | 4358940..4359104 | + | 165 | WP_001310984.1 | protein YojO | - |
| K3F56_RS20935 (4359218) | 4359218..4359727 | + | 510 | WP_000712249.1 | serine protease inhibitor ecotin | - |
| K3F56_RS20940 (4360399) | 4360399..4361166 | - | 768 | Protein_4123 | exonuclease | - |
| K3F56_RS20945 (4361259) | 4361259..4361450 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| K3F56_RS20950 (4361447) | 4361447..4361635 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| K3F56_RS20955 (4362203) | 4362203..4362421 | - | 219 | WP_001171942.1 | protein YdfC | - |
| K3F56_RS22170 (4362451) | 4362451..4362579 | - | 129 | WP_000344964.1 | protein YdfB | - |
| K3F56_RS20960 (4362581) | 4362581..4362736 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| K3F56_RS20965 (4362903) | 4362903..4363310 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| K3F56_RS20970 (4363394) | 4363394..4363624 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| K3F56_RS20975 (4363608) | 4363608..4363886 | + | 279 | Protein_4131 | hypothetical protein | - |
| K3F56_RS20980 (4363921) | 4363921..4364070 | + | 150 | WP_011443592.1 | protein YdfW | - |
| K3F56_RS20985 (4364507) | 4364507..4364839 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| K3F56_RS20990 (4365042) | 4365042..4365347 | - | 306 | WP_001326990.1 | protein YdfV | - |
| K3F56_RS20995 (4365372) | 4365372..4365611 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| K3F56_RS21000 (4365611) | 4365611..4365898 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| K3F56_RS21005 (4365970) | 4365970..4366125 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| K3F56_RS21010 (4366342) | 4366342..4366593 | + | 252 | WP_000980994.1 | protein Rem | - |
| K3F56_RS21015 (4366660) | 4366660..4366938 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| K3F56_RS21020 (4366940) | 4366940..4367989 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| K3F56_RS21025 (4368003) | 4368003..4368755 | + | 753 | WP_001047135.1 | antitermination protein | - |
| K3F56_RS21030 (4369033) | 4369033..4369122 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| K3F56_RS21035 (4369177) | 4369177..4369389 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| K3F56_RS21040 (4369690) | 4369690..4369905 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| K3F56_RS21045 (4370269) | 4370269..4370439 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| K3F56_RS21050 (4370659) | 4370659..4370874 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| K3F56_RS21055 (4370879) | 4370879..4371190 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| K3F56_RS21060 (4371187) | 4371187..4371720 | + | 534 | WP_001092971.1 | lysozyme | - |
| K3F56_RS21065 (4371717) | 4371717..4372214 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| K3F56_RS21070 (4372577) | 4372577..4372789 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| K3F56_RS21075 (4372800) | 4372800..4372988 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| K3F56_RS21080 (4372991) | 4372991..4373056 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| K3F56_RS21085 (4373135) | 4373135..4373290 | + | 156 | WP_001309517.1 | protein YnfN | - |
| K3F56_RS21090 (4373462) | 4373462..4373635 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| K3F56_RS21095 (4373787) | 4373787..4374197 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| K3F56_RS21100 (4374255) | 4374255..4374488 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| K3F56_RS21105 (4375379) | 4375379..4376203 | + | 825 | WP_001191059.1 | acid resistance transcriptional activator GadX | - |
| K3F56_RS21110 (4376571) | 4376571..4377299 | + | 729 | WP_000149999.1 | acid resistance transcriptional activator GadW | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|