MGE detailed information
MGE type: Genomic_island MGE length: 16545 bp
Accession: NZ_CP080620 Location: 4100700..4117244 Organism: Escherichia coli strain TOP10 Replicon: chromosome
Accession: NZ_CP080620 Location: 4100700..4117244 Organism: Escherichia coli strain TOP10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K3F56_RS19565 (4095946) | 4095946..4096890 | + | 945 | WP_000947068.1 | nickel ABC transporter permease subunit NikB | - |
| K3F56_RS19570 (4096887) | 4096887..4097720 | + | 834 | WP_001008963.1 | nickel ABC transporter permease subunit NikC | - |
| K3F56_RS19575 (4097720) | 4097720..4098484 | + | 765 | WP_001136229.1 | nickel import ATP-binding protein NikD | - |
| K3F56_RS19580 (4098481) | 4098481..4099287 | + | 807 | WP_000173631.1 | nickel import ATP-binding protein NikE | - |
| K3F56_RS19585 (4099293) | 4099293..4099694 | + | 402 | WP_001190062.1 | nickel-responsive transcriptional regulator NikR | - |
| K3F56_RS22140 (4099897) | 4099897..4100103 | + | 207 | Protein_3853 | hypothetical protein | - |
| K3F56_RS19595 (4100700) | 4100700..4101302 | - | 603 | WP_000790589.1 | Tyrosine recombinase XerC | VF |
| K3F56_RS19600 (4102758) | 4102758..4103474 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| K3F56_RS19605 (4103494) | 4103494..4104600 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| K3F56_RS19610 (4104665) | 4104665..4105645 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| K3F56_RS22145 (4105755) | 4105755..4105960 | + | 206 | Protein_3858 | HNH endonuclease | - |
| K3F56_RS19615 (4106228) | 4106228..4107468 | - | 1241 | Protein_3859 | helicase YjhR | - |
| K3F56_RS22150 (4107584) | 4107584..4107715 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| K3F56_RS19625 (4108206) | 4108206..4108463 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| K3F56_RS19630 (4108475) | 4108475..4109020 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| K3F56_RS19635 (4109076) | 4109076..4109822 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| K3F56_RS19640 (4109991) | 4109991..4110209 | + | 219 | Protein_3864 | hypothetical protein | - |
| K3F56_RS19645 (4110247) | 4110247..4110363 | + | 117 | Protein_3865 | VOC family protein | - |
| K3F56_RS19650 (4110608) | 4110608..4111729 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| K3F56_RS19655 (4111726) | 4111726..4112004 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| K3F56_RS19660 (4112016) | 4112016..4113329 | + | 1314 | WP_000460842.1 | PTS sugar transporter subunit IIC SgcC | - |
| K3F56_RS19665 (4113342) | 4113342..4114148 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| K3F56_RS19670 (4114279) | 4114279..4114710 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| K3F56_RS19675 (4114722) | 4114722..4115354 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| K3F56_RS19680 (4115371) | 4115371..4116153 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| K3F56_RS19685 (4116456) | 4116456..4117244 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| K3F56_RS19690 (4117249) | 4117249..4118154 | + | 906 | WP_000714564.1 | dihydrodipicolinate synthase family protein | - |
| K3F56_RS19695 (4118165) | 4118165..4120132 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| K3F56_RS19700 (4120239) | 4120239..4121588 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|