MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 53205 bp
Accession: NZ_CP080588 Location: 1..53205 Organism: Xanthomonas oryzae pv. oryzicola strain GX01 Replicon: plasmid pXOCgx01
Accession: NZ_CP080588 Location: 1..53205 Organism: Xanthomonas oryzae pv. oryzicola strain GX01 Replicon: plasmid pXOCgx01
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K2I41_RS00005 (K2I41_00005) | 502..810 | + | 309 | WP_113224197.1 | CcgAII protein | - |
| K2I41_RS00010 (K2I41_00010) | 1016..1351 | + | 336 | WP_075243222.1 | hypothetical protein | - |
| K2I41_RS00015 (K2I41_00015) | 1892..2245 | - | 354 | WP_048485065.1 | hypothetical protein | - |
| K2I41_RS00020 (K2I41_00020) | 2294..3001 | - | 708 | WP_048485066.1 | StbB family protein | - |
| K2I41_RS00025 (K2I41_00025) | 2998..3444 | - | 447 | WP_150411547.1 | conjugal transfer protein TraD | - |
| K2I41_RS00030 (K2I41_00030) | 3794..4189 | + | 396 | WP_150411548.1 | conjugal transfer protein TraA | - |
| K2I41_RS00035 (K2I41_00035) | 4366..5940 | + | 1575 | WP_150411549.1 | type IV secretion system DNA-binding domain-containing protein | - |
| K2I41_RS00040 (K2I41_00040) | 5954..8914 | + | 2961 | WP_048485071.1 | Multifunctional conjugation protein TraI | Relaxase |
| K2I41_RS00045 (K2I41_00045) | 8983..9309 | - | 327 | WP_193566048.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| K2I41_RS00050 (K2I41_00050) | 9306..9476 | - | 171 | WP_229697988.1 | antitoxin MazE family protein | Antitoxin Detail |
| K2I41_RS00055 (K2I41_00055) | 9743..10162 | - | 420 | WP_048485073.1 | hypothetical protein | - |
| K2I41_RS00060 (K2I41_00060) | 10288..11196 | - | 909 | WP_048485074.1 | Type IV secretion system protein virB1 | VF |
| K2I41_RS00065 (K2I41_00065) | 11183..12205 | - | 1023 | WP_048485075.1 | Type IV secretion system protein VirB11 | VF |
| K2I41_RS00070 (K2I41_00070) | 12216..13436 | - | 1221 | WP_048485076.1 | TrbI/VirB10 family protein | - |
| K2I41_RS00075 (K2I41_00075) | 13438..14220 | - | 783 | WP_075244577.1 | Type IV secretion system protein virB9 | VF |
| K2I41_RS00080 (K2I41_00080) | 14245..14919 | - | 675 | WP_047340364.1 | type IV secretion system protein | - |
| K2I41_RS00085 (K2I41_00085) | 14916..15782 | - | 867 | WP_047340363.1 | type IV secretion system protein | - |
| K2I41_RS00090 (K2I41_00090) | 15770..16177 | - | 408 | WP_047340362.1 | hypothetical protein | - |
| K2I41_RS00095 (K2I41_00095) | 16170..16382 | - | 213 | WP_017174006.1 | hypothetical protein | - |
| K2I41_RS00100 (K2I41_00100) | 16434..17099 | - | 666 | WP_117231651.1 | type IV secretion system protein | - |
| K2I41_RS00105 (K2I41_00105) | 17096..19729 | - | 2634 | WP_047340360.1 | Type IV secretion system protein virB4 | VF |
| K2I41_RS00110 (K2I41_00110) | 19752..20051 | - | 300 | WP_003490875.1 | VirB3 family type IV secretion system protein | - |
| K2I41_RS00115 (K2I41_00115) | 20048..20425 | - | 378 | WP_011052992.1 | TrbC/VirB2 family protein | - |
| K2I41_RS00120 (K2I41_00120) | 20446..20736 | - | 291 | WP_047340585.1 | hypothetical protein | - |
| K2I41_RS00125 (K2I41_00125) | 21796..22179 | + | 384 | WP_075244581.1 | hypothetical protein | - |
| K2I41_RS00130 (K2I41_00130) | 22746..23396 | + | 651 | WP_048485085.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| K2I41_RS00135 (K2I41_00135) | 23490..23825 | + | 336 | WP_224229667.1 | YecR family lipoprotein | - |
| K2I41_RS00140 (K2I41_00140) | 24100..24606 | + | 507 | WP_150411551.1 | hypothetical protein | - |
| K2I41_RS00145 (K2I41_00145) | 24680..24847 | + | 168 | WP_162527344.1 | hypothetical protein | - |
| K2I41_RS00150 (K2I41_00150) | 25077..25367 | - | 291 | WP_161600056.1 | hypothetical protein | - |
| K2I41_RS00155 (K2I41_00155) | 25426..25689 | - | 264 | WP_048485088.1 | hypothetical protein | - |
| K2I41_RS00160 (K2I41_00160) | 26026..26349 | + | 324 | WP_117231657.1 | hypothetical protein | - |
| K2I41_RS00165 (K2I41_00165) | 27251..27619 | + | 369 | WP_150411553.1 | hypothetical protein | - |
| K2I41_RS00170 (K2I41_00170) | 27709..28959 | + | 1251 | WP_150411554.1 | TolC family protein | - |
| K2I41_RS00175 (K2I41_00175) | 28956..30197 | + | 1242 | WP_150411555.1 | efflux RND transporter periplasmic adaptor subunit | - |
| K2I41_RS00180 (K2I41_00180) | 30207..33338 | + | 3132 | WP_150411556.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| K2I41_RS00185 (K2I41_00185) | 33359..34066 | + | 708 | WP_224229657.1 | HupE/UreJ family protein | - |
| K2I41_RS00190 (K2I41_00190) | 34081..34737 | + | 657 | WP_150411558.1 | hypothetical protein | - |
| K2I41_RS00195 (K2I41_00195) | 34799..35023 | + | 225 | WP_150411559.1 | hypothetical protein | - |
| K2I41_RS00200 (K2I41_00200) | 35102..36436 | + | 1335 | WP_150411560.1 | MFS transporter | - |
| K2I41_RS00210 (K2I41_00210) | 36699..37325 | - | 627 | WP_150411561.1 | SEC-C domain-containing protein | - |
| K2I41_RS00215 (K2I41_00215) | 37372..38424 | - | 1053 | WP_150411562.1 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| K2I41_RS00220 (K2I41_00220) | 38698..40278 | + | 1581 | WP_150411563.1 | AAA family ATPase | - |
| K2I41_RS00225 (K2I41_00225) | 40256..41353 | + | 1098 | WP_224229659.1 | AAA family ATPase | - |
| K2I41_RS00230 (K2I41_00230) | 41392..42333 | + | 942 | Protein_44 | Tn3 family transposase TnpR_TnXo19 | Transposase |
| K2I41_RS00235 (K2I41_00235) | 42370..45330 | + | 2961 | WP_076611205.1 | Tn3 family transposase TnpA_TnXo19 | Transposase |
| K2I41_RS00240 (K2I41_00240) | 45891..46289 | + | 399 | WP_150411565.1 | hypothetical protein | - |
| K2I41_RS00245 | 46359..46556 | + | 198 | WP_046941444.1 | hypothetical protein | - |
| K2I41_RS00250 (K2I41_00245) | 46553..46792 | + | 240 | WP_047340383.1 | hypothetical protein | - |
| K2I41_RS00255 (K2I41_00250) | 46808..47401 | + | 594 | WP_150411566.1 | hypothetical protein | - |
| K2I41_RS00260 (K2I41_00255) | 47480..47824 | + | 345 | WP_047340385.1 | hypothetical protein | - |
| K2I41_RS00265 (K2I41_00260) | 47908..48492 | + | 585 | WP_150411567.1 | DUF6012 family protein | - |
| K2I41_RS00270 (K2I41_00265) | 48964..49650 | + | 687 | WP_048485090.1 | hypothetical protein | - |
| K2I41_RS00275 (K2I41_00270) | 50576..51280 | + | 705 | WP_048485091.1 | DNA-binding protein | - |
| K2I41_RS00280 | 51404..51715 | + | 312 | WP_224229661.1 | Chromosome-partitioning ATPase Soj | VF |
| K2I41_RS00285 | 51712..52041 | + | 330 | WP_224229663.1 | hypothetical protein | - |
| K2I41_RS00290 (K2I41_00280) | 52038..52373 | + | 336 | WP_048485092.1 | hypothetical protein | - |
| K2I41_RS00295 (K2I41_00285) | 52636..52827 | + | 192 | WP_047340391.1 | hypothetical protein | - |
| K2I41_RS00300 (K2I41_00290) | 52887..53195 | + | 309 | WP_224229665.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|