MGE detailed information
MGE type: Genomic_island MGE length: 17571 bp
Accession: NZ_CP080462 Location: 2314891..2332461 Organism: Vibrio cholerae strain ICDC-VC702 Replicon: chromosome
Accession: NZ_CP080462 Location: 2314891..2332461 Organism: Vibrio cholerae strain ICDC-VC702 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K1T74_RS10610 | 2310996..2311418 | - | 423 | WP_154026422.1 | type VI secretion system baseplate subunit TssE | - |
| K1T74_RS10615 | 2311415..2312773 | - | 1359 | WP_154026423.1 | type VI secretion system contractile sheath large subunit | - |
| K1T74_RS10620 | 2312826..2314307 | - | 1482 | WP_172527175.1 | type VI secretion system contractile sheath large subunit | - |
| K1T74_RS10625 | 2314307..2314816 | - | 510 | WP_154026427.1 | type VI secretion system contractile sheath small subunit | - |
| K1T74_RS10630 | 2314891..2315409 | - | 519 | WP_154026429.1 | type VI secretion system tube protein Hcp | - |
| K1T74_RS10635 | 2315444..2316826 | - | 1383 | WP_220105751.1 | type VI secretion system ImpA family N-terminal domain-containing protein | - |
| K1T74_RS10640 | 2316851..2318089 | - | 1239 | WP_220105752.1 | hypothetical protein | - |
| K1T74_RS10645 | 2318446..2318946 | - | 501 | Protein_2074 | IS30 family transposase | - |
| K1T74_RS10650 | 2319258..2319434 | - | 177 | WP_001211490.1 | AlpA family transcriptional regulator | - |
| K1T74_RS10655 | 2319578..2320054 | + | 477 | WP_000148678.1 | DNA repair protein RadC | - |
| K1T74_RS10660 | 2320051..2320479 | + | 429 | WP_220105753.1 | DUF2787 domain-containing protein | - |
| K1T74_RS10665 | 2320530..2320976 | + | 447 | WP_032468964.1 | DUF2787 domain-containing protein | - |
| K1T74_RS10670 | 2321083..2322069 | + | 987 | WP_220105754.1 | GTPase family protein | - |
| K1T74_RS10675 | 2322104..2322745 | - | 642 | WP_220105755.1 | inovirus Gp2 family protein | - |
| K1T74_RS10680 | 2323126..2323464 | + | 339 | WP_220105756.1 | hypothetical protein | - |
| K1T74_RS10685 | 2323752..2324144 | + | 393 | WP_238844543.1 | hypothetical protein | - |
| K1T74_RS10690 | 2324237..2324437 | - | 201 | WP_019830047.1 | AlpA family transcriptional regulator | - |
| K1T74_RS10695 | 2325072..2326433 | + | 1362 | WP_171356568.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| K1T74_RS10700 | 2326430..2326897 | + | 468 | WP_071180723.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| K1T74_RS10705 | 2327325..2327903 | + | 579 | WP_000109982.1 | class I SAM-dependent methyltransferase | - |
| K1T74_RS10710 | 2327907..2330843 | + | 2937 | WP_171356567.1 | DEAD/DEAH box helicase family protein | - |
| K1T74_RS10715 | 2330913..2331614 | + | 702 | Protein_2088 | NERD domain-containing protein | - |
| K1T74_RS10720 | 2331952..2332461 | - | 510 | WP_001077909.1 | hypothetical protein | - |
| K1T74_RS10725 | 2332658..2334338 | - | 1681 | Protein_2090 | SWIM zinc finger domain-containing protein | - |
| K1T74_RS10730 | 2334561..2335244 | + | 684 | WP_055051555.1 | VC0807 family protein | - |
| K1T74_RS10735 | 2335312..2336928 | - | 1617 | WP_220105757.1 | NAD(P)/FAD-dependent oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|