MGE detailed information
MGE type: Genomic_island MGE length: 31702 bp
Accession: NZ_CP080400 Location: 989621..1021322 Organism: Dickeya fangzhongdai strain Onc5 Replicon: chromosome
Accession: NZ_CP080400 Location: 989621..1021322 Organism: Dickeya fangzhongdai strain Onc5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K0H75_RS04415 (K0H75_04415) | 985271..986383 | - | 1113 | WP_038918019.1 | HBL/NHE enterotoxin family protein | - |
| K0H75_RS04420 (K0H75_04420) | 986402..987478 | - | 1077 | WP_038918020.1 | hypothetical protein | - |
| K0H75_RS04425 (K0H75_04425) | 987480..987872 | - | 393 | WP_038918021.1 | hypothetical protein | - |
| K0H75_RS04430 (K0H75_04430) | 987892..988281 | - | 390 | WP_038918022.1 | hypothetical protein | - |
| K0H75_RS04435 (K0H75_04435) | 988757..989611 | + | 855 | WP_038918023.1 | hypothetical protein | - |
| K0H75_RS04440 (K0H75_04440) | 989621..989770 | + | 150 | WP_162942909.1 | hypothetical protein | - |
| K0H75_RS04445 (K0H75_04445) | 989945..990589 | - | 645 | WP_049842533.1 | hypothetical protein | - |
| K0H75_RS04450 (K0H75_04450) | 990664..991332 | - | 669 | WP_071605159.1 | DUF1906 domain-containing protein | - |
| K0H75_RS04455 (K0H75_04455) | 991578..992714 | - | 1137 | WP_038918025.1 | linear amide C-N hydrolase | - |
| K0H75_RS04460 (K0H75_04460) | 993373..994476 | - | 1104 | WP_231348844.1 | hypothetical protein | - |
| K0H75_RS04465 (K0H75_04465) | 994694..994994 | - | 301 | Protein_867 | IS3 family transposase ISEhe3 | Transposase |
| K0H75_RS04470 (K0H75_04470) | 995097..996506 | - | 1410 | WP_038918027.1 | MATE family efflux transporter | - |
| K0H75_RS04475 (K0H75_04475) | 996539..998020 | - | 1482 | WP_038918028.1 | hypothetical protein | VF |
| K0H75_RS04480 (K0H75_04480) | 998145..998762 | + | 618 | WP_038920824.1 | HTH-type transcriptional regulator BetI | VF |
| K0H75_RS04485 (K0H75_04485) | 998857..999969 | + | 1113 | WP_038918029.1 | efflux RND transporter periplasmic adaptor subunit | - |
| K0H75_RS04490 (K0H75_04490) | 999966..1003028 | + | 3063 | WP_038918030.1 | efflux RND transporter permease subunit | - |
| K0H75_RS04495 (K0H75_04495) | 1003074..1003880 | + | 807 | WP_038918031.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| K0H75_RS04500 (K0H75_04500) | 1004119..1004486 | + | 368 | Protein_874 | GNAT family N-acetyltransferase | - |
| K0H75_RS04505 (K0H75_04505) | 1004724..1005866 | + | 1143 | WP_038918034.1 | Fic family protein | - |
| K0H75_RS04510 (K0H75_04510) | 1005889..1005999 | - | 111 | Protein_876 | IS3 family transposase IS1400 | Transposase |
| K0H75_RS04515 (K0H75_04515) | 1006089..1006331 | + | 243 | WP_071605161.1 | helix-turn-helix transcriptional regulator | - |
| K0H75_RS04520 (K0H75_04520) | 1006657..1006881 | + | 225 | WP_038918035.1 | DUF1778 domain-containing protein | - |
| K0H75_RS04525 (K0H75_04525) | 1006999..1008123 | + | 1125 | WP_038918036.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| K0H75_RS04530 (K0H75_04530) | 1008375..1010270 | + | 1896 | WP_038918037.1 | N-6 DNA methylase | - |
| K0H75_RS04535 (K0H75_04535) | 1010257..1011219 | + | 963 | WP_071605162.1 | restriction endonuclease subunit S | - |
| K0H75_RS04540 (K0H75_04540) | 1011923..1012492 | - | 570 | WP_038918038.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| K0H75_RS04545 (K0H75_04545) | 1012625..1015369 | + | 2745 | WP_038918039.1 | N-6 DNA methylase | - |
| K0H75_RS04550 (K0H75_04550) | 1015362..1017371 | + | 2010 | WP_193745938.1 | helicase-related protein | - |
| K0H75_RS04555 (K0H75_04555) | 1017373..1018638 | + | 1266 | WP_038918041.1 | GIY-YIG nuclease family protein | - |
| K0H75_RS04560 (K0H75_04560) | 1018749..1019054 | - | 306 | WP_038918043.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| K0H75_RS04565 (K0H75_04565) | 1019057..1019275 | - | 219 | WP_038918044.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| K0H75_RS04570 (K0H75_04570) | 1019334..1020077 | - | 744 | WP_038918045.1 | MobC family replication-relaxation protein | - |
| K0H75_RS04575 (K0H75_04575) | 1020981..1021322 | - | 342 | WP_038918046.1 | hypothetical protein | - |
| K0H75_RS04580 (K0H75_04580) | 1021779..1023041 | - | 1263 | WP_038918047.1 | integrase arm-type DNA-binding domain-containing protein | - |
| K0H75_RS04590 (K0H75_04590) | 1023943..1026096 | + | 2154 | WP_038918048.1 | ornithine decarboxylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|