MGE detailed information
MGE type: Genomic_island MGE length: 41555 bp
Accession: NZ_CP080400 Location: 1655915..1697469 Organism: Dickeya fangzhongdai strain Onc5 Replicon: chromosome
Accession: NZ_CP080400 Location: 1655915..1697469 Organism: Dickeya fangzhongdai strain Onc5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K0H75_RS07245 (K0H75_07245) | 1652256..1653197 | + | 942 | WP_231348851.1 | helix-turn-helix domain-containing protein | - |
| K0H75_RS07250 (K0H75_07250) | 1653526..1655193 | + | 1668 | WP_038918463.1 | thiamine pyrophosphate-binding protein | - |
| K0H75_RS07255 (K0H75_07255) | 1655369..1655854 | + | 486 | WP_038918465.1 | DUF2501 domain-containing protein | - |
| K0H75_RS07260 (K0H75_07260) | 1655915..1656505 | - | 591 | WP_038918466.1 | flavin reductase family protein | - |
| K0H75_RS07265 (K0H75_07265) | 1656733..1657065 | + | 333 | WP_071605183.1 | DUF1971 domain-containing protein | - |
| K0H75_RS07270 (K0H75_07270) | 1657076..1657414 | + | 339 | WP_038918468.1 | DUF1869 domain-containing protein | - |
| K0H75_RS07275 (K0H75_07275) | 1657714..1658913 | + | 1200 | WP_049842690.1 | multidrug effflux MFS transporter | - |
| K0H75_RS07280 | 1658956..1659054 | + | 99 | Protein_1416 | flavodoxin | - |
| K0H75_RS07285 (K0H75_07280) | 1659255..1659581 | - | 327 | WP_038920877.1 | EthD family reductase | - |
| K0H75_RS07290 (K0H75_07285) | 1659889..1660800 | + | 912 | WP_038918469.1 | HTH-type transcriptional regulator HdfR | VF |
| K0H75_RS07295 (K0H75_07290) | 1660959..1661879 | - | 921 | WP_038918470.1 | DMT family transporter | - |
| K0H75_RS07300 (K0H75_07295) | 1662167..1663003 | + | 837 | WP_038918471.1 | transporter substrate-binding domain-containing protein | - |
| K0H75_RS07305 (K0H75_07300) | 1663007..1663696 | + | 690 | WP_038918472.1 | 5-oxoprolinase subunit PxpB | - |
| K0H75_RS07310 (K0H75_07305) | 1663693..1664664 | + | 972 | WP_038918473.1 | biotin-dependent carboxyltransferase family protein | - |
| K0H75_RS07315 (K0H75_07310) | 1664682..1665452 | + | 771 | WP_038668683.1 | 5-oxoprolinase subunit PxpA | - |
| K0H75_RS07320 (K0H75_07315) | 1665521..1666810 | - | 1290 | WP_038920879.1 | HipA domain-containing protein | - |
| K0H75_RS07325 (K0H75_07320) | 1666800..1667138 | - | 339 | WP_038918474.1 | helix-turn-helix transcriptional regulator | - |
| K0H75_RS07330 (K0H75_07325) | 1667378..1668580 | - | 1203 | WP_038918475.1 | pyridoxal phosphate-dependent aminotransferase | - |
| K0H75_RS07335 (K0H75_07330) | 1668925..1669848 | + | 924 | WP_038918477.1 | nitrogen assimilation transcriptional regulator NAC | - |
| K0H75_RS07340 (K0H75_07335) | 1669957..1670388 | + | 432 | WP_071605184.1 | acetyl-CoA carboxylase | - |
| K0H75_RS07345 (K0H75_07340) | 1670511..1671263 | + | 753 | WP_038918478.1 | SDR family oxidoreductase | - |
| K0H75_RS07350 (K0H75_07345) | 1671286..1671981 | + | 696 | WP_038918479.1 | amino acid ABC transporter permease | - |
| K0H75_RS07355 (K0H75_07350) | 1671987..1672757 | + | 771 | WP_038918480.1 | amino acid ABC transporter permease | - |
| K0H75_RS07360 (K0H75_07355) | 1672763..1673488 | + | 726 | WP_164087763.1 | hypothetical protein | VF |
| K0H75_RS07365 (K0H75_07360) | 1673755..1674162 | - | 408 | WP_038918481.1 | very short patch repair endonuclease | - |
| K0H75_RS07370 (K0H75_07365) | 1674267..1680107 | - | 5841 | WP_038918482.1 | DEAD/DEAH box helicase | - |
| K0H75_RS07375 (K0H75_07370) | 1680127..1682214 | - | 2088 | WP_038918483.1 | hypothetical protein | - |
| K0H75_RS07380 (K0H75_07375) | 1682227..1684788 | - | 2562 | WP_038918484.1 | hypothetical protein | - |
| K0H75_RS07385 (K0H75_07380) | 1684785..1686020 | - | 1236 | WP_038918486.1 | DNA cytosine methyltransferase | - |
| K0H75_RS07390 (K0H75_07385) | 1686305..1687327 | + | 1023 | WP_038920880.1 | DUF4917 family protein | - |
| K0H75_RS07395 (K0H75_07390) | 1688072..1689016 | + | 945 | WP_038918487.1 | zincin-like metallopeptidase domain-containing protein | - |
| K0H75_RS07400 (K0H75_07395) | 1689337..1689573 | + | 237 | WP_038918488.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| K0H75_RS07405 (K0H75_07400) | 1689576..1689890 | + | 315 | WP_038900914.1 | CcdB family protein | Toxin Detail |
| K0H75_RS07410 | 1689887..1690009 | - | 123 | Protein_1442 | mobilization protein mobC | - |
| K0H75_RS07415 (K0H75_07405) | 1690213..1691865 | + | 1653 | WP_038918489.1 | hypothetical protein | - |
| K0H75_RS07420 (K0H75_07410) | 1691865..1693355 | + | 1491 | WP_038918490.1 | hypothetical protein | - |
| K0H75_RS07425 (K0H75_07415) | 1693627..1694736 | - | 1110 | WP_198677320.1 | hypothetical protein | - |
| K0H75_RS07430 (K0H75_07420) | 1694859..1695970 | + | 1112 | WP_121479603.1 | IS3 family transposase IS1400 | Transposase |
| K0H75_RS07435 (K0H75_07425) | 1695982..1697097 | - | 1116 | WP_231348852.1 | P-loop NTPase fold protein | - |
| K0H75_RS07440 (K0H75_07430) | 1697116..1698224 | - | 1109 | Protein_1448 | IS3 family transposase | - |
| K0H75_RS07450 (K0H75_07440) | 1698777..1701890 | - | 3114 | WP_038918514.1 | beta-galactosidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|