MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 78418 bp
Accession: NZ_CP080377 Location: 2115558..2193975 Organism: Janthinobacterium sp. PAMC25594 Replicon: chromosome
Accession: NZ_CP080377 Location: 2115558..2193975 Organism: Janthinobacterium sp. PAMC25594 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KY494_RS09375 (KY494_09375) | 2111380..2112978 | - | 1599 | WP_219890740.1 | altronate dehydratase family protein | - |
| KY494_RS09380 (KY494_09380) | 2112998..2114392 | - | 1395 | WP_219890741.1 | glucuronate isomerase | - |
| KY494_RS09385 (KY494_09385) | 2114602..2114856 | + | 255 | WP_219890742.1 | hypothetical protein | - |
| KY494_RS09390 (KY494_09390) | 2115030..2115164 | + | 135 | Protein_1864 | helix-turn-helix domain-containing protein | - |
| KY494_RS09395 (KY494_09395) | 2115549..2117633 | + | 2085 | WP_258194768.1 | type I secretion system permease/ATPase | - |
| KY494_RS09400 (KY494_09400) | 2117633..2119075 | + | 1443 | WP_219890743.1 | HlyD family type I secretion periplasmic adaptor subunit | - |
| KY494_RS09405 (KY494_09405) | 2119180..2119671 | + | 492 | WP_219890744.1 | hypothetical protein | - |
| KY494_RS09410 (KY494_09410) | 2119805..2121646 | + | 1842 | WP_219890745.1 | transglutaminase domain-containing protein | - |
| KY494_RS09415 (KY494_09415) | 2121666..2123777 | + | 2112 | WP_219890746.1 | Fic family protein | - |
| KY494_RS09420 (KY494_09420) | 2123768..2124283 | - | 516 | WP_219890747.1 | hypothetical protein | - |
| KY494_RS09425 (KY494_09425) | 2124683..2125666 | + | 984 | WP_219890748.1 | IS5 family transposase IS52 | Transposase |
| KY494_RS09430 (KY494_09430) | 2126046..2126594 | + | 549 | WP_219890749.1 | hypothetical protein | - |
| KY494_RS09435 (KY494_09435) | 2126780..2126896 | + | 117 | Protein_1873 | IS3 family transposase ISAeca4 | Transposase |
| KY494_RS09440 (KY494_09440) | 2127043..2127435 | - | 393 | WP_219890750.1 | hypothetical protein | - |
| KY494_RS09445 (KY494_09445) | 2127475..2128562 | - | 1088 | Protein_1875 | IS3 family transposase | - |
| KY494_RS29675 | 2128637..2128777 | - | 141 | Protein_1876 | IS6 family transposase ISSus3 | Transposase |
| KY494_RS09450 (KY494_09450) | 2128888..2130510 | - | 1623 | WP_219890751.1 | Methyl-accepting chemotaxis protein II | VF |
| KY494_RS29680 | 2130713..2131480 | - | 768 | Protein_1878 | Methyl-accepting chemotaxis protein II | VF |
| KY494_RS29685 | 2131781..2132269 | - | 489 | Protein_1879 | Methyl-accepting chemotaxis protein II | VF |
| KY494_RS09460 (KY494_09460) | 2132325..2132546 | + | 222 | WP_219890753.1 | hypothetical protein | - |
| KY494_RS09465 (KY494_09465) | 2132566..2133072 | - | 507 | WP_258194771.1 | DUF3429 domain-containing protein | - |
| KY494_RS09470 (KY494_09470) | 2133226..2133624 | + | 399 | WP_219890754.1 | DUF393 domain-containing protein | - |
| KY494_RS09475 (KY494_09475) | 2133931..2134626 | + | 696 | WP_219891546.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| KY494_RS09480 (KY494_09480) | 2134656..2135639 | - | 984 | WP_219890755.1 | FAD-dependent oxidoreductase | - |
| KY494_RS09485 (KY494_09485) | 2135809..2136708 | - | 900 | WP_258194772.1 | MerR family transcriptional regulator | - |
| KY494_RS09490 (KY494_09490) | 2137027..2137452 | - | 426 | WP_219890757.1 | BLUF domain-containing protein | - |
| KY494_RS09495 (KY494_09495) | 2137475..2138182 | - | 708 | WP_116744653.1 | GTP cyclohydrolase I | - |
| KY494_RS09500 (KY494_09500) | 2138218..2138718 | - | 501 | WP_219890758.1 | TspO/MBR family protein | - |
| KY494_RS09505 (KY494_09505) | 2138715..2139164 | - | 450 | WP_219890759.1 | nuclear transport factor 2 family protein | - |
| KY494_RS09510 (KY494_09510) | 2139274..2140479 | - | 1206 | WP_219890760.1 | cyclopropane-fatty-acyl-phospholipid synthase family protein | - |
| KY494_RS09515 (KY494_09515) | 2140476..2141252 | - | 777 | WP_219890761.1 | DUF1365 domain-containing protein | - |
| KY494_RS09520 (KY494_09520) | 2141249..2142532 | - | 1284 | WP_219890762.1 | FAD-dependent oxidoreductase | - |
| KY494_RS09525 (KY494_09525) | 2142628..2143233 | + | 606 | WP_219890763.1 | HTH-type transcriptional repressor KstR2 | VF |
| KY494_RS09530 (KY494_09530) | 2143230..2144489 | + | 1260 | WP_219890764.1 | AMP-binding protein | - |
| KY494_RS09535 (KY494_09535) | 2144609..2144998 | + | 390 | WP_219890765.1 | phosphonate transporter | - |
| KY494_RS09540 (KY494_09540) | 2144995..2146356 | + | 1362 | WP_219890766.1 | sensor domain-containing diguanylate cyclase | - |
| KY494_RS09545 (KY494_09545) | 2146346..2148094 | + | 1749 | WP_219890767.1 | putative signaling protein | VF |
| KY494_RS09550 (KY494_09550) | 2148664..2149041 | - | 378 | WP_219890768.1 | Methyl-accepting chemotaxis protein III | VF |
| KY494_RS09555 (KY494_09555) | 2149180..2150862 | - | 1683 | WP_219890769.1 | Methyl-accepting chemotaxis protein II | VF |
| KY494_RS09560 (KY494_09560) | 2150904..2151317 | - | 414 | WP_219890770.1 | BLUF domain-containing protein | - |
| KY494_RS09565 (KY494_09565) | 2151384..2151632 | - | 249 | WP_219890771.1 | hypothetical protein | - |
| KY494_RS29690 | 2151908..2152048 | + | 141 | Protein_1902 | IS3 family transposase | - |
| KY494_RS09570 (KY494_09570) | 2152202..2152420 | + | 219 | WP_219890772.1 | LytTR family DNA-binding domain-containing protein | - |
| KY494_RS09575 (KY494_09575) | 2152525..2152854 | + | 330 | WP_219890773.1 | hypothetical protein | - |
| KY494_RS09580 (KY494_09580) | 2153131..2153844 | - | 714 | WP_219890774.1 | hypothetical protein | - |
| KY494_RS09585 (KY494_09585) | 2154888..2155091 | + | 204 | Protein_1906 | FGGY-family carbohydrate kinase | - |
| KY494_RS09590 (KY494_09590) | 2155257..2155535 | + | 279 | WP_219890775.1 | hypothetical protein | - |
| KY494_RS09595 (KY494_09595) | 2155696..2156691 | + | 996 | WP_219890776.1 | IS481 family transposase ISKpn27 | Transposase |
| KY494_RS09600 (KY494_09600) | 2156852..2157106 | + | 255 | WP_219890777.1 | antitoxin | Antitoxin Detail |
| KY494_RS09605 (KY494_09605) | 2157103..2157429 | + | 327 | WP_219890778.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| KY494_RS09610 (KY494_09610) | 2157718..2158098 | + | 381 | WP_219890779.1 | Chemotaxis protein CheY | VF |
| KY494_RS09615 (KY494_09615) | 2158298..2159515 | + | 1218 | WP_219890780.1 | HD-GYP domain-containing protein | - |
| KY494_RS09620 (KY494_09620) | 2159712..2162198 | - | 2487 | WP_219890781.1 | Autoinducer 2 sensor kinase/phosphatase LuxQ | VF |
| KY494_RS09625 (KY494_09625) | 2163220..2164929 | + | 1710 | WP_219891547.1 | Methyl-accepting chemotaxis protein II | VF |
| KY494_RS29695 | 2165145..2165312 | - | 168 | Protein_1915 | DDE-type integrase/transposase/recombinase | - |
| KY494_RS09635 (KY494_09635) | 2165320..2165721 | - | 402 | Protein_1916 | IS66 family transposase ISAzo19 | Transposase |
| KY494_RS09640 (KY494_09640) | 2166026..2166286 | - | 261 | WP_219890783.1 | hypothetical protein | - |
| KY494_RS09645 (KY494_09645) | 2166300..2167295 | - | 996 | WP_219887543.1 | IS481 family transposase ISKpn27 | Transposase |
| KY494_RS09650 (KY494_09650) | 2167515..2167703 | - | 189 | WP_219890784.1 | hypothetical protein | - |
| KY494_RS29700 | 2167724..2168020 | + | 297 | WP_258194776.1 | hypothetical protein | - |
| KY494_RS09655 (KY494_09655) | 2168111..2168980 | + | 870 | WP_258194777.1 | IS4 family transposase ISHch2 | Transposase |
| KY494_RS09660 (KY494_09660) | 2169234..2172437 | + | 3204 | WP_219890785.1 | Blue-light-activated protein | VF |
| KY494_RS09665 (KY494_09665) | 2172458..2172778 | - | 321 | WP_219890786.1 | hypothetical protein | - |
| KY494_RS09670 (KY494_09670) | 2172997..2173305 | + | 309 | Protein_1924 | transposase zinc-binding domain-containing protein | - |
| KY494_RS09675 (KY494_09675) | 2173388..2174950 | - | 1563 | WP_219890787.1 | IS66 family transposase ISBcen14 | Transposase |
| KY494_RS09680 (KY494_09680) | 2174980..2175327 | - | 348 | WP_219890788.1 | IS66 family transposase IS883 | Transposase |
| KY494_RS29705 | 2175528..2175689 | - | 162 | Protein_1927 | IS66 family transposase ISBcen14 | Transposase |
| KY494_RS09690 (KY494_09690) | 2175807..2176608 | + | 802 | Protein_1928 | transposase | - |
| KY494_RS09695 (KY494_09695) | 2177124..2178932 | - | 1809 | WP_219890790.1 | hypothetical protein | - |
| KY494_RS09700 (KY494_09700) | 2178935..2179414 | - | 480 | WP_219890791.1 | hypothetical protein | - |
| KY494_RS09705 (KY494_09705) | 2179411..2180577 | - | 1167 | WP_219890792.1 | dsDNA nuclease domain-containing protein | - |
| KY494_RS09710 (KY494_09710) | 2181445..2181993 | + | 549 | WP_219890793.1 | hypothetical protein | - |
| KY494_RS09715 (KY494_09715) | 2182173..2182294 | + | 122 | Protein_1933 | IS3 family transposase | - |
| KY494_RS09720 (KY494_09720) | 2183775..2184584 | + | 810 | WP_219890794.1 | hypothetical protein | - |
| KY494_RS09725 (KY494_09725) | 2184818..2185261 | + | 444 | WP_219890795.1 | hypothetical protein | - |
| KY494_RS09730 (KY494_09730) | 2185370..2185543 | - | 174 | WP_258194922.1 | helix-turn-helix transcriptional regulator | - |
| KY494_RS09735 (KY494_09735) | 2185764..2186153 | + | 390 | WP_219890796.1 | hypothetical protein | - |
| KY494_RS09740 (KY494_09740) | 2186200..2186496 | + | 297 | WP_219890797.1 | hypothetical protein | - |
| KY494_RS09745 (KY494_09745) | 2186824..2187666 | + | 843 | WP_219890798.1 | hypothetical protein | - |
| KY494_RS09750 (KY494_09750) | 2187848..2189164 | - | 1317 | WP_219890799.1 | replication initiation protein | - |
| KY494_RS09755 (KY494_09755) | 2189947..2191833 | - | 1887 | WP_219890800.1 | hypothetical protein ; Integrase | Integrase |
| KY494_RS09760 (KY494_09760) | 2192388..2192852 | + | 465 | WP_219890801.1 | helix-turn-helix transcriptional regulator | - |
| KY494_RS09765 (KY494_09765) | 2193399..2193788 | + | 390 | WP_219890802.1 | Response regulator MprA | VF |
| KY494_RS09770 (KY494_09770) | 2193785..2194936 | + | 1152 | WP_219890803.1 | HAMP domain-containing sensor histidine kinase | - |
| KY494_RS09775 (KY494_09775) | 2195334..2195549 | - | 216 | WP_219890804.1 | hypothetical protein | - |
| KY494_RS09780 (KY494_09780) | 2195546..2196610 | - | 1065 | WP_258194778.1 | phage portal protein | - |
| KY494_RS09785 (KY494_09785) | 2196607..2198418 | - | 1812 | WP_219890805.1 | terminase ATPase subunit family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|