MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 65798 bp
Accession: NZ_CP080338 Location: 1..65798 Organism: Lacticaseibacillus paracasei strain L1 Replicon: plasmid p2
Accession: NZ_CP080338 Location: 1..65798 Organism: Lacticaseibacillus paracasei strain L1 Replicon: plasmid p2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KZR06_RS15330 (KZR06_15260) | 782..1153 | - | 372 | WP_016383731.1 | PrgI family protein | - |
| KZR06_RS15335 (KZR06_15265) | 1169..2002 | - | 834 | WP_016383730.1 | hypothetical protein | - |
| KZR06_RS15340 (KZR06_15270) | 2021..2227 | - | 207 | WP_016383729.1 | hypothetical protein | - |
| KZR06_RS15345 (KZR06_15275) | 2245..4146 | - | 1902 | WP_259912431.1 | type IV secretory system conjugative DNA transfer family protein | - |
| KZR06_RS15350 (KZR06_15280) | 4146..4622 | - | 477 | WP_085694191.1 | PcfB family protein | - |
| KZR06_RS15355 (KZR06_15285) | 4643..6214 | - | 1572 | WP_259912432.1 | Pesticidal crystal protein Cry22Aa | VF |
| KZR06_RS15360 (KZR06_15290) | 6230..6502 | - | 273 | WP_085694194.1 | hypothetical protein | - |
| KZR06_RS15365 (KZR06_15295) | 6516..6797 | - | 282 | WP_259912433.1 | hypothetical protein | - |
| KZR06_RS15370 (KZR06_15300) | 7111..8529 | - | 1419 | WP_052915958.1 | IS5 family transposase ISLrh3 | Transposase |
| KZR06_RS15375 (KZR06_15305) | 8696..8890 | - | 195 | WP_085694197.1 | hypothetical protein | - |
| KZR06_RS15380 (KZR06_15310) | 9389..9661 | - | 273 | WP_259912449.1 | HU family DNA-binding protein | - |
| KZR06_RS15385 (KZR06_15315) | 9770..10537 | - | 768 | WP_259912434.1 | hypothetical protein | - |
| KZR06_RS15390 (KZR06_15320) | 10930..12909 | - | 1980 | WP_259912435.1 | SpaA isopeptide-forming pilin-related protein | - |
| KZR06_RS15395 (KZR06_15325) | 13058..13279 | - | 222 | WP_259912436.1 | hypothetical protein | - |
| KZR06_RS15400 (KZR06_15330) | 13276..13485 | - | 210 | WP_259912437.1 | hypothetical protein | - |
| KZR06_RS15405 (KZR06_15335) | 13510..13686 | - | 177 | WP_259912438.1 | hypothetical protein | - |
| KZR06_RS15410 (KZR06_15340) | 13683..13940 | - | 258 | WP_259912439.1 | hypothetical protein | - |
| KZR06_RS15415 (KZR06_15350) | 15140..16213 | - | 1074 | WP_259912440.1 | replication initiator protein A | - |
| KZR06_RS15420 (KZR06_15355) | 16639..17406 | + | 768 | WP_016370075.1 | Sporulation initiation inhibitor protein Soj | VF |
| KZR06_RS15425 (KZR06_15360) | 17417..17800 | + | 384 | WP_016370074.1 | hypothetical protein | - |
| KZR06_RS15430 (KZR06_15365) | 17878..18240 | - | 363 | WP_259912450.1 | hypothetical protein | - |
| KZR06_RS15435 (KZR06_15370) | 18566..21673 | - | 3108 | WP_259912441.1 | HsdR family type I site-specific deoxyribonuclease | - |
| KZR06_RS15440 (KZR06_15375) | 21693..22841 | - | 1149 | WP_259912442.1 | restriction endonuclease subunit S | - |
| KZR06_RS15445 (KZR06_15380) | 22838..24436 | - | 1599 | WP_259912443.1 | type I restriction-modification system subunit M | - |
| KZR06_RS15450 (KZR06_15385) | 24483..25829 | - | 1347 | WP_259912444.1 | SAM-dependent methyltransferase | - |
| KZR06_RS15455 (KZR06_15390) | 25819..26385 | - | 567 | WP_259912445.1 | hypothetical protein | - |
| KZR06_RS15460 (KZR06_15395) | 26731..28149 | + | 1419 | WP_019863889.1 | IS5 family transposase ISLrh2 | Transposase |
| KZR06_RS15465 (KZR06_15400) | 28335..29255 | - | 921 | WP_003574021.1 | IS30 family transposase ISLpl1 | Transposase |
| KZR06_RS15470 (KZR06_15405) | 29411..30529 | - | 1119 | WP_259912446.1 | hypothetical protein | - |
| KZR06_RS15475 (KZR06_15410) | 30538..32145 | - | 1608 | WP_259912447.1 | AAA family ATPase | - |
| KZR06_RS15480 (KZR06_15415) | 32626..33093 | - | 468 | WP_259912448.1 | hypothetical protein | - |
| KZR06_RS15485 (KZR06_15420) | 33418..33660 | + | 243 | WP_016363783.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| KZR06_RS15490 (KZR06_15425) | 33653..33934 | + | 282 | WP_003573774.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| KZR06_RS15495 (KZR06_15430) | 34187..34810 | + | 624 | WP_259912418.1 | zinc ribbon domain-containing protein | - |
| KZR06_RS15500 (KZR06_15435) | 34852..36270 | - | 1419 | WP_052915958.1 | IS5 family transposase ISLrh3 | Transposase |
| KZR06_RS15505 (KZR06_15440) | 36540..37703 | - | 1164 | WP_259912419.1 | PrsW family intramembrane metalloprotease | - |
| KZR06_RS15510 (KZR06_15445) | 37790..38374 | - | 585 | WP_259912420.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| KZR06_RS15515 (KZR06_15450) | 38461..38610 | - | 150 | WP_228772279.1 | hypothetical protein | - |
| KZR06_RS15520 (KZR06_15455) | 38751..39467 | - | 717 | WP_003572070.1 | nitroreductase family protein | - |
| KZR06_RS15525 (KZR06_15460) | 39719..40780 | - | 1062 | WP_259912421.1 | IS30 family transposase ISCth3 | Transposase |
| KZR06_RS15530 | 40903..41004 | + | 102 | Protein_41 | site-specific integrase | - |
| KZR06_RS15535 (KZR06_15465) | 41093..41452 | + | 360 | WP_057904518.1 | DUF1304 domain-containing protein | - |
| KZR06_RS15540 (KZR06_15470) | 41647..42399 | + | 753 | WP_259912422.1 | IS30 family transposase ISLpl1 | Transposase |
| KZR06_RS15545 (KZR06_15475) | 42662..43612 | + | 951 | WP_259912423.1 | IS30 family transposase ISCth3 | Transposase |
| KZR06_RS15550 (KZR06_15480) | 43582..43956 | - | 375 | Protein_45 | ECF transporter S component | - |
| KZR06_RS15555 (KZR06_15485) | 44421..45401 | - | 981 | WP_033572689.1 | LacI family DNA-binding transcriptional regulator | - |
| KZR06_RS15560 (KZR06_15490) | 45771..47723 | + | 1953 | WP_259912424.1 | sucrose-specific PTS transporter subunit IIBC | - |
| KZR06_RS15565 (KZR06_15495) | 47855..48709 | + | 855 | WP_033572691.1 | ROK family protein | - |
| KZR06_RS15575 (KZR06_15505) | 50165..50458 | + | 294 | WP_033572692.1 | hypothetical protein | - |
| KZR06_RS15580 (KZR06_15510) | 50477..51370 | - | 894 | WP_085694166.1 | hypothetical protein | VF |
| KZR06_RS15585 (KZR06_15515) | 51880..52452 | + | 573 | WP_085694168.1 | hypothetical protein | - |
| KZR06_RS15590 (KZR06_15520) | 52466..52915 | + | 450 | Protein_53 | nitroreductase | - |
| KZR06_RS15595 (KZR06_15525) | 52908..53063 | + | 156 | WP_189269875.1 | hypothetical protein | - |
| KZR06_RS15600 (KZR06_15530) | 53060..53449 | + | 390 | WP_085694170.1 | hypothetical protein | - |
| KZR06_RS15605 (KZR06_15540) | 54093..55463 | - | 1371 | WP_259912426.1 | DUF3991 and TOPRIM domain-containing protein | - |
| KZR06_RS15610 (KZR06_15545) | 55508..57718 | - | 2211 | WP_085694175.1 | hypothetical protein | Relaxase |
| KZR06_RS15615 (KZR06_15550) | 57690..58091 | - | 402 | WP_016383739.1 | hypothetical protein | Relaxase |
| KZR06_RS15620 (KZR06_15555) | 58341..58616 | - | 276 | WP_016383738.1 | hypothetical protein | - |
| KZR06_RS15625 (KZR06_15560) | 58706..59692 | - | 987 | WP_016383737.1 | ArdC-like ssDNA-binding domain-containing protein | - |
| KZR06_RS15630 (KZR06_15565) | 59711..60865 | - | 1155 | WP_259912427.1 | hypothetical protein | - |
| KZR06_RS15635 (KZR06_15570) | 60901..61131 | - | 231 | WP_016383735.1 | hypothetical protein | - |
| KZR06_RS15640 (KZR06_15575) | 61149..61673 | - | 525 | WP_259912428.1 | hypothetical protein | - |
| KZR06_RS15645 (KZR06_15580) | 61688..64186 | - | 2499 | WP_259912429.1 | CHAP domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|