MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 74549 bp
Accession: NZ_CP080337 Location: 1..74549 Organism: Lacticaseibacillus paracasei strain L1 Replicon: plasmid p1
Accession: NZ_CP080337 Location: 1..74549 Organism: Lacticaseibacillus paracasei strain L1 Replicon: plasmid p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KZR06_RS14885 (KZR06_14810) | 853..1098 | + | 246 | WP_259912415.1 | hypothetical protein | - |
| KZR06_RS14890 (KZR06_14815) | 1085..3631 | + | 2547 | WP_259912401.1 | ArdC-like ssDNA-binding domain-containing protein | - |
| KZR06_RS14895 (KZR06_14820) | 3970..4074 | + | 105 | WP_010493218.1 | putative holin-like toxin | - |
| KZR06_RS14900 (KZR06_14825) | 4325..5755 | - | 1431 | WP_003582065.1 | ISLre2 family transposase ISLrh4 | Transposase |
| KZR06_RS14905 (KZR06_14830) | 5877..6266 | - | 390 | WP_016370740.1 | hypothetical protein | - |
| KZR06_RS14910 (KZR06_14835) | 6269..6412 | - | 144 | WP_003582061.1 | hypothetical protein | - |
| KZR06_RS14915 (KZR06_14840) | 6405..6854 | - | 450 | WP_016372597.1 | hypothetical protein | - |
| KZR06_RS14920 (KZR06_14845) | 6868..7158 | - | 291 | WP_003582058.1 | hypothetical protein | - |
| KZR06_RS14925 (KZR06_14850) | 7168..7614 | - | 447 | WP_259912402.1 | hypothetical protein | - |
| KZR06_RS14930 (KZR06_14855) | 8117..9010 | + | 894 | WP_259912403.1 | hypothetical protein | VF |
| KZR06_RS14935 (KZR06_14860) | 9016..9375 | + | 360 | WP_259912404.1 | hypothetical protein | - |
| KZR06_RS14940 (KZR06_14865) | 9436..10222 | + | 787 | Protein_12 | IS5 family transposase | - |
| KZR06_RS14945 (KZR06_14870) | 10284..10499 | + | 216 | Protein_13 | hypothetical protein | - |
| KZR06_RS14950 (KZR06_14875) | 10503..11622 | + | 1120 | Protein_14 | ImmA/IrrE family metallo-endopeptidase | - |
| KZR06_RS14955 (KZR06_14880) | 11637..12596 | + | 960 | WP_259912405.1 | D-2-hydroxyacid dehydrogenase | - |
| KZR06_RS14960 (KZR06_14885) | 12714..12911 | - | 198 | Protein_16 | hypothetical protein | - |
| KZR06_RS14965 (KZR06_14890) | 12974..13690 | - | 717 | WP_003572070.1 | nitroreductase family protein | - |
| KZR06_RS14970 | 13942..14214 | - | 273 | WP_259912416.1 | hypothetical protein | - |
| KZR06_RS14980 (KZR06_14910) | 15333..15863 | - | 531 | WP_259912407.1 | IS30 family transposase ISCth3 | Transposase |
| KZR06_RS14985 | 15986..16087 | + | 102 | Protein_21 | site-specific integrase | - |
| KZR06_RS14990 (KZR06_14915) | 16176..16535 | + | 360 | WP_259912408.1 | DUF1304 domain-containing protein | - |
| KZR06_RS14995 (KZR06_14920) | 16869..17789 | - | 921 | WP_003574021.1 | IS30 family transposase ISLpl1 | Transposase |
| KZR06_RS15000 (KZR06_14925) | 17913..18758 | - | 846 | WP_235017565.1 | hypothetical protein | - |
| KZR06_RS15005 (KZR06_14930) | 19002..19091 | + | 90 | Protein_25 | recombinase family protein | - |
| KZR06_RS15010 (KZR06_14935) | 19170..19565 | + | 396 | WP_259912409.1 | IS3 family transposase IS153 | Transposase |
| KZR06_RS15015 (KZR06_14940) | 19562..20317 | + | 756 | WP_259912410.1 | IS3 family transposase IS153 | Transposase |
| KZR06_RS15020 (KZR06_14945) | 20760..21158 | - | 399 | WP_003563273.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| KZR06_RS15025 (KZR06_14950) | 21272..21643 | - | 372 | WP_003563277.1 | TIGR02328 family protein | - |
| KZR06_RS15030 (KZR06_14955) | 21790..22299 | - | 510 | WP_259912411.1 | alcohol dehydrogenase | - |
| KZR06_RS15035 (KZR06_14960) | 22329..22613 | - | 285 | WP_016363781.1 | BRCT domain-containing protein | - |
| KZR06_RS15040 (KZR06_14965) | 22619..23269 | - | 651 | WP_003586220.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| KZR06_RS15045 (KZR06_14970) | 23406..23687 | - | 282 | WP_003573774.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| KZR06_RS15050 (KZR06_14975) | 23680..23922 | - | 243 | WP_016363783.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| KZR06_RS15055 (KZR06_14980) | 24049..24417 | - | 369 | WP_003582572.1 | YxeA family protein | - |
| KZR06_RS15060 (KZR06_14985) | 25225..25313 | + | 89 | Protein_36 | IS30 family transposase | - |
| KZR06_RS15065 (KZR06_14990) | 25355..25822 | - | 468 | WP_003582565.1 | DNA starvation/stationary phase protection protein | - |
| KZR06_RS15070 (KZR06_14995) | 26243..27085 | - | 843 | WP_015975057.1 | IS3 family transposase ISBce13 | Transposase |
| KZR06_RS15075 (KZR06_15000) | 27139..27390 | - | 252 | WP_002816285.1 | IS3 family transposase IS153 | Transposase |
| KZR06_RS15080 (KZR06_15005) | 27487..27705 | + | 219 | Protein_40 | IS6 family transposase IS257R1 | Transposase |
| KZR06_RS15085 (KZR06_15010) | 27799..28098 | - | 300 | WP_259912412.1 | hypothetical protein | - |
| KZR06_RS15090 (KZR06_15015) | 28049..28393 | - | 345 | WP_016376036.1 | hypothetical protein | - |
| KZR06_RS15095 (KZR06_15020) | 28595..28939 | - | 345 | WP_016383917.1 | DUF5388 domain-containing protein | - |
| KZR06_RS15100 (KZR06_15025) | 28941..29756 | - | 816 | WP_003583182.1 | AAA family ATPase | - |
| KZR06_RS15105 (KZR06_15030) | 30301..31782 | + | 1482 | WP_049176710.1 | primase C-terminal domain-containing protein | - |
| KZR06_RS15110 (KZR06_15035) | 31888..32574 | + | 687 | WP_259912413.1 | IS6 family transposase ISSau6 | Transposase |
| KZR06_RS15115 (KZR06_15040) | 32659..33558 | - | 900 | WP_016374702.1 | Foldase protein PrsA | VF |
| KZR06_RS15120 (KZR06_15045) | 33848..39556 | + | 5709 | WP_259912414.1 | PII-type proteinase | VF |
| KZR06_RS15125 (KZR06_15050) | 39733..40977 | - | 1245 | WP_259912389.1 | ISL3 family transposase IS1165 | Transposase |
| KZR06_RS15130 (KZR06_15055) | 41206..41571 | - | 366 | WP_003568234.1 | DUF956 family protein | - |
| KZR06_RS15135 (KZR06_15060) | 41826..42737 | - | 912 | WP_016383494.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| KZR06_RS15140 (KZR06_15065) | 42755..43570 | - | 816 | WP_003568238.1 | PTS mannose/fructose/sorbose transporter subunit IIC | - |
| KZR06_RS15145 (KZR06_15070) | 43598..44572 | - | 975 | WP_003568240.1 | mannose/fructose/sorbose PTS transporter subunit IIA | - |
| KZR06_RS15150 (KZR06_15075) | 45159..46329 | - | 1171 | Protein_54 | group II intron reverse transcriptase/maturase | - |
| KZR06_RS15155 (KZR06_15080) | 47159..48112 | + | 954 | WP_259912390.1 | LacI family DNA-binding transcriptional regulator | - |
| KZR06_RS15160 (KZR06_15085) | 48317..48697 | + | 381 | Protein_56 | alpha-amylase family glycosyl hydrolase | - |
| KZR06_RS15165 (KZR06_15090) | 48752..49435 | - | 684 | WP_002816607.1 | IS6 family transposase ISBth20 | Transposase |
| KZR06_RS15170 (KZR06_15095) | 49510..49920 | + | 411 | Protein_58 | IS30 family transposase ISLpl1 | Transposase |
| KZR06_RS15175 (KZR06_15100) | 49934..50620 | + | 687 | Protein_59 | IS30 family transposase IS1070 | Transposase |
| KZR06_RS15180 (KZR06_15105) | 50747..51766 | + | 1020 | WP_115652718.1 | HTH-type transcriptional regulator MalR | VF |
| KZR06_RS15185 (KZR06_15110) | 51796..51924 | + | 129 | Protein_61 | HTH-type transcriptional repressor PurR | VF |
| KZR06_RS15190 (KZR06_15115) | 52005..52256 | + | 252 | WP_060611877.1 | IS3 family transposase IS153 | Transposase |
| KZR06_RS15195 (KZR06_15120) | 52451..53152 | + | 702 | WP_259912391.1 | IS3 family transposase ISBce13 | Transposase |
| KZR06_RS15200 (KZR06_15125) | 53326..53742 | - | 417 | Protein_64 | IS30 family transposase IS1070 | Transposase |
| KZR06_RS15205 (KZR06_15130) | 53786..54769 | + | 984 | WP_017261405.1 | aldose epimerase family protein | - |
| KZR06_RS15210 (KZR06_15135) | 54772..55443 | + | 672 | WP_259912392.1 | beta-phosphoglucomutase | - |
| KZR06_RS15215 (KZR06_15140) | 55586..55984 | + | 399 | WP_259912393.1 | IS3 family transposase IS153 | Transposase |
| KZR06_RS15220 | 56033..56404 | + | 372 | Protein_68 | IS3 family transposase ISBce13 | Transposase |
| KZR06_RS15225 (KZR06_15150) | 56461..56577 | + | 117 | Protein_69 | IS3 family transposase ISBce13 | Transposase |
| KZR06_RS15230 | 56638..56907 | + | 270 | WP_259912417.1 | discoidin domain-containing protein | - |
| KZR06_RS15235 (KZR06_15160) | 57325..59595 | - | 2271 | WP_259912394.1 | glycoside hydrolase family 65 protein | - |
| KZR06_RS15240 (KZR06_15165) | 59688..60791 | - | 1104 | WP_115652552.1 | Trehalose import ATP-binding protein SugC | VF |
| KZR06_RS15245 (KZR06_15170) | 60818..61492 | - | 675 | WP_259912395.1 | hypothetical protein | - |
| KZR06_RS15250 (KZR06_15175) | 61528..62340 | - | 813 | WP_016511553.1 | carbohydrate ABC transporter permease | - |
| KZR06_RS15255 (KZR06_15180) | 62340..63200 | - | 861 | WP_079323001.1 | sugar ABC transporter permease | - |
| KZR06_RS15260 (KZR06_15185) | 63245..64540 | - | 1296 | WP_181897322.1 | extracellular solute-binding protein | - |
| KZR06_RS15265 (KZR06_15190) | 64978..66396 | + | 1419 | WP_194498631.1 | IS5 family transposase ISLrh3 | Transposase |
| KZR06_RS15270 (KZR06_15195) | 66711..67025 | - | 315 | WP_259912396.1 | hypothetical protein | - |
| KZR06_RS15275 (KZR06_15200) | 67219..67602 | + | 384 | WP_003581871.1 | hypothetical protein | - |
| KZR06_RS15280 (KZR06_15205) | 67599..68891 | + | 1293 | WP_259912397.1 | Y-family DNA polymerase | - |
| KZR06_RS15285 (KZR06_15210) | 68884..69225 | + | 342 | WP_194498894.1 | hypothetical protein | - |
| KZR06_RS15290 (KZR06_15215) | 69233..69568 | - | 336 | WP_019885041.1 | DUF5388 domain-containing protein | - |
| KZR06_RS15295 (KZR06_15220) | 69561..70373 | - | 813 | WP_029778479.1 | ParA family protein | - |
| KZR06_RS15300 (KZR06_15225) | 70606..71595 | + | 990 | Protein_84 | replication initiator protein A | - |
| KZR06_RS15305 (KZR06_15235) | 71976..72632 | + | 657 | Protein_85 | hypothetical protein | - |
| KZR06_RS15310 (KZR06_15240) | 73227..73427 | + | 201 | WP_216501255.1 | plasmid replication protein | - |
| KZR06_RS15315 (KZR06_15245) | 73424..73696 | + | 273 | WP_016379708.1 | hypothetical protein | - |
| KZR06_RS15320 (KZR06_15250) | 73686..74123 | + | 438 | WP_259912398.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|