MGE detailed information
MGE type: Genomic_island MGE length: 14870 bp
Accession: NZ_CP080253 Location: 2387708..2402577 Organism: Escherichia coli strain PC6 Replicon: chromosome
Accession: NZ_CP080253 Location: 2387708..2402577 Organism: Escherichia coli strain PC6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KZX77_RS11765 (2387708) | 2387708..2387974 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| KZX77_RS11770 (2387974) | 2387974..2389296 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| KZX77_RS11775 (2389489) | 2389489..2390119 | + | 631 | Protein_2314 | hypothetical protein | - |
| KZX77_RS11780 (2390148) | 2390148..2391550 | - | 1403 | Protein_2315 | ISNCY family transposase ISKpn21 | Transposase |
| KZX77_RS11785 (2391888) | 2391888..2392096 | + | 209 | Protein_2316 | AraC family transcriptional regulator | - |
| KZX77_RS11790 (2392351) | 2392351..2393385 | + | 1035 | Protein_2317 | hypothetical protein | VF |
| KZX77_RS11795 (2393407) | 2393407..2393901 | + | 495 | WP_139520084.1 | hypothetical protein | VF |
| KZX77_RS11800 (2393914) | 2393914..2394417 | + | 504 | WP_061093470.1 | hypothetical protein | VF |
| KZX77_RS11805 (2394476) | 2394476..2395390 | + | 915 | WP_000520676.1 | hypothetical protein | VF |
| KZX77_RS11810 (2395724) | 2395724..2398003 | + | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| KZX77_RS11815 (2398251) | 2398251..2398448 | + | 198 | WP_000543384.1 | two-component system connector SafA | - |
| KZX77_RS11820 (2398523) | 2398523..2399284 | + | 762 | WP_000060492.1 | acid stress response transcriptional regulator YdeO | - |
| KZX77_RS11825 (2399686) | 2399686..2401368 | + | 1683 | WP_001295684.1 | sulfatase | - |
| KZX77_RS11830 (2401420) | 2401420..2402577 | + | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| KZX77_RS11835 (2402543) | 2402543..2402665 | - | 123 | WP_120795387.1 | protein YneP | - |
| KZX77_RS11840 (2402868) | 2402868..2404553 | + | 1686 | WP_000628576.1 | ABC transporter ATP-binding protein/permease | - |
| KZX77_RS11845 (2404591) | 2404591..2406970 | + | 2380 | Protein_2328 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.008 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.008 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.01 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.008 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.008 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.008 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.008 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.008 |