MGE detailed information
MGE type: Prophage MGE length: 69522 bp
Accession: NZ_CP080247 Location: 1057989..1127510 Organism: Escherichia sp. TM-G17TGC Replicon: chromosome
Accession: NZ_CP080247 Location: 1057989..1127510 Organism: Escherichia sp. TM-G17TGC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KY274_RS05035 (1053850) | 1053850..1054623 | - | 774 | WP_000804550.1 | glucitol operon DNA-binding transcriptional repressor SrlR | - |
| KY274_RS05040 (1054690) | 1054690..1055049 | - | 360 | WP_000252908.1 | transcriptional regulator GutM | - |
| KY274_RS05045 (1055154) | 1055154..1055933 | - | 780 | WP_001077358.1 | sorbitol-6-phosphate dehydrogenase | - |
| KY274_RS05050 (1055937) | 1055937..1056308 | - | 372 | WP_000216194.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| KY274_RS05055 (1056319) | 1056319..1057278 | - | 960 | WP_000148878.1 | PTS glucitol/sorbitol transporter subunit IIB | - |
| KY274_RS05060 (1057275) | 1057275..1057838 | - | 564 | WP_000573321.1 | PTS glucitol/sorbitol transporter subunit IIC | - |
| KY274_RS05065 (1058094) | 1058094..1059179 | + | 1086 | WP_001295177.1 | lytic murein transglycosylase B | - |
| KY274_RS05070 (1059324) | 1059324..1059821 | + | 498 | WP_000132231.1 | nicotinamide-nucleotide amidase | - |
| KY274_RS05075 (1059901) | 1059901..1060962 | + | 1062 | WP_000963138.1 | recombinase RecA | - |
| KY274_RS05080 (1061031) | 1061031..1061531 | + | 501 | WP_000140508.1 | recombination regulator RecX | - |
| KY274_RS05085 (1061659) | 1061659..1064289 | + | 2631 | WP_000047184.1 | alanine--tRNA ligase | - |
| KY274_RS05090 (1064524) | 1064524..1064709 | + | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| KY274_RS05120 (1066167) | 1066167..1066733 | + | 567 | WP_000273288.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| KY274_RS05125 (1066730) | 1066730..1067158 | + | 429 | WP_001287454.1 | YqaA family protein | - |
| KY274_RS05130 (1067231) | 1067231..1068787 | + | 1557 | WP_000611804.1 | glutamate--cysteine ligase | - |
| KY274_RS05135 (1068937) | 1068937..1069451 | + | 515 | Protein_1002 | hypothetical protein | VF |
| KY274_RS05140 (1069515) | 1069515..1071053 | - | 1539 | WP_001295176.1 | hypothetical protein | VF |
| KY274_RS05145 (1071070) | 1071070..1072242 | - | 1173 | WP_001326681.1 | hypothetical protein | VF |
| KY274_RS05150 (1072369) | 1072369..1072899 | - | 531 | WP_000378442.1 | hypothetical protein | VF |
| KY274_RS05155 (1072990) | 1072990..1073325 | - | 336 | WP_000119763.1 | L-valine transporter subunit YgaH | - |
| KY274_RS05160 (1073315) | 1073315..1074052 | - | 738 | WP_000445651.1 | L-valine exporter subunit YgaZ | - |
| KY274_RS05165 (1074176) | 1074176..1075353 | - | 1178 | Protein_1008 | MFS transporter | - |
| KY274_RS05170 (1075545) | 1075545..1076537 | - | 993 | WP_001216525.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| KY274_RS05175 (1076595) | 1076595..1077659 | - | 1065 | WP_000774988.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| KY274_RS05180 (1077652) | 1077652..1078854 | - | 1203 | WP_000985494.1 | hypothetical protein | VF |
| KY274_RS05185 (1079208) | 1079208..1080167 | - | 960 | WP_000777963.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| KY274_RS05190 (1080177) | 1080177..1082321 | - | 2145 | WP_000246534.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| KY274_RS05195 (1082294) | 1082294..1082704 | - | 411 | WP_000080947.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| KY274_RS05200 (1082701) | 1082701..1082946 | - | 246 | WP_001223227.1 | glutaredoxin-like protein NrdH | - |
| KY274_RS05205 (1083194) | 1083194..1083523 | - | 330 | WP_001295174.1 | DUF883 domain-containing protein | - |
| KY274_RS05210 (1083675) | 1083675..1084019 | + | 345 | WP_000281320.1 | DUF2002 family protein | - |
| KY274_RS05215 (1084056) | 1084056..1084505 | - | 450 | WP_000492656.1 | L-alanine exporter AlaE | - |
| KY274_RS05220 (1085174) | 1085174..1085578 | + | 405 | WP_000115383.1 | DNA-binding protein StpA | - |
| KY274_RS05225 (1085625) | 1085625..1086149 | - | 525 | WP_001229442.1 | thiosulfate sulfurtransferase YgaP | - |
| KY274_RS05230 (1086159) | 1086159..1086458 | - | 300 | WP_000137280.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| KY274_RS05235 (1086641) | 1086641..1086799 | + | 159 | WP_000508177.1 | YqaE/Pmp3 family membrane protein | - |
| KY274_RS05240 (1086883) | 1086883..1087332 | + | 450 | WP_000522415.1 | potassium binding protein Kbp | - |
| KY274_RS05245 (1087333) | 1087333..1087995 | - | 663 | WP_000156811.1 | DNA-binding transcriptional regulator CsiR | - |
| KY274_RS05250 (1088016) | 1088016..1089416 | - | 1401 | WP_001295173.1 | GABA permease | - |
| KY274_RS05255 (1089654) | 1089654..1090934 | - | 1281 | WP_001087611.1 | hypothetical protein | VF |
| KY274_RS05260 (1090948) | 1090948..1092396 | - | 1449 | WP_000772831.1 | NADP-dependent succinate-semialdehyde dehydrogenase | - |
| KY274_RS05265 (1092419) | 1092419..1093687 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| KY274_RS05270 (1093707) | 1093707..1094684 | - | 978 | WP_033801603.1 | glutarate dioxygenase GlaH | - |
| KY274_RS05275 (1095020) | 1095020..1097272 | - | 2253 | Protein_1030 | alpha-amylase family glycosyl hydrolase | - |
| KY274_RS05285 (1098658) | 1098658..1100031 | + | 1374 | Protein_1031 | DUF5507 domain-containing protein | - |
| KY274_RS05290 (1100377) | 1100377..1100535 | + | 159 | Protein_1032 | recombinase family protein | - |
| KY274_RS05295 (1100759) | 1100759..1100878 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| KY274_RS05300 (1100943) | 1100943..1105523 | + | 4581 | WP_010723187.1 | hypothetical protein | VF |
| KY274_RS05305 (1105887) | 1105887..1106216 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| KY274_RS05310 (1106237) | 1106237..1106554 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| KY274_RS05315 (1106592) | 1106592..1106792 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| KY274_RS05320 (1106801) | 1106801..1107283 | - | 483 | WP_001407480.1 | RadC family protein | - |
| KY274_RS05325 (1107292) | 1107292..1107750 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| KY274_RS05330 (1107853) | 1107853..1108037 | - | 185 | Protein_1040 | DUF905 domain-containing protein | - |
| KY274_RS05335 (1108648) | 1108648..1110351 | - | 1704 | WP_000896263.1 | protein YfjW | - |
| KY274_RS05340 (1110493) | 1110493..1111502 | + | 1010 | Protein_1042 | arsenic transporter | - |
| KY274_RS22750 (1111515) | 1111515..1111667 | + | 153 | Protein_1043 | arsenate reductase | - |
| KY274_RS05350 (1112054) | 1112054..1112521 | - | 468 | WP_000702495.1 | protein YfjT | - |
| KY274_RS05355 (1112545) | 1112545..1112988 | - | 444 | WP_000824222.1 | lipoprotein YfjS | - |
| KY274_RS05360 (1112988) | 1112988..1113224 | - | 237 | WP_001144029.1 | protein YpjK | - |
| KY274_RS05365 (1113265) | 1113265..1113966 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| KY274_RS05370 (1114183) | 1114183..1115004 | - | 822 | WP_000197391.1 | DUF932 domain-containing protein | - |
| KY274_RS05375 (1115096) | 1115096..1115959 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| KY274_RS05380 (1116314) | 1116314..1116685 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| KY274_RS05385 (1116678) | 1116678..1117751 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| KY274_RS05390 (1117893) | 1117893..1118156 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| KY274_RS05395 (1118516) | 1118516..1120132 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| KY274_RS05400 (1120129) | 1120129..1122318 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| KY274_RS05405 (1122496) | 1122496..1123122 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| KY274_RS05410 (1123275) | 1123275..1124684 | - | 1410 | WP_000481742.1 | YfjI family protein | - |
| KY274_RS05415 (1124813) | 1124813..1125025 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| KY274_RS05420 (1125069) | 1125069..1126025 | + | 957 | WP_000510827.1 | protein YfjH | - |
| KY274_RS05425 (1126269) | 1126269..1127510 | - | 1242 | WP_000101723.1 | hypothetical protein ; Integrase | Integrase |
| KY274_RS05435 (1128291) | 1128291..1128773 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| KY274_RS05440 (1128944) | 1128944..1129381 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| KY274_RS05445 (1129371) | 1129371..1129661 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| KY274_RS05450 (1129723) | 1129723..1130064 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| KY274_RS05455 (1130213) | 1130213..1131874 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|