MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93724 bp
Accession: NZ_CP080240 Location: 1..93724 Organism: Vibrio sp. ED002 Replicon: plasmid p2-ED002
Accession: NZ_CP080240 Location: 1..93724 Organism: Vibrio sp. ED002 Replicon: plasmid p2-ED002
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ITG12_RS27015 (ITG12_26930) | 69..1259 | + | 1191 | WP_248875209.1 | IS91 family transposase ISVsa9 | Transposase |
| ITG12_RS27020 (ITG12_26935) | 1542..1871 | - | 330 | WP_045499081.1 | hypothetical protein | - |
| ITG12_RS27025 (ITG12_26940) | 1871..2410 | - | 540 | WP_045499084.1 | ParA family protein | - |
| ITG12_RS27030 (ITG12_26945) | 2634..2966 | + | 333 | Protein_3 | Recombination-promoting nuclease RpnD | VF |
| ITG12_RS27035 (ITG12_26950) | 3034..3954 | + | 921 | WP_233969805.1 | IS5 family transposase ISVal1 | Transposase |
| ITG12_RS27040 (ITG12_26955) | 4106..4237 | + | 132 | Protein_5 | transposase | - |
| ITG12_RS27045 (ITG12_26960) | 4734..5009 | + | 276 | WP_039978003.1 | HU family DNA-binding protein | - |
| ITG12_RS27050 (ITG12_26965) | 5039..5176 | + | 138 | WP_248875211.1 | hypothetical protein | - |
| ITG12_RS27055 (ITG12_26970) | 5377..5619 | + | 243 | WP_248875213.1 | hypothetical protein | - |
| ITG12_RS27060 (ITG12_26975) | 6261..6800 | + | 540 | WP_248875215.1 | transglutaminase-like cysteine peptidase | - |
| ITG12_RS27065 (ITG12_26980) | 7026..7832 | - | 807 | Protein_10 | TAXI family TRAP transporter solute-binding subunit | - |
| ITG12_RS27070 (ITG12_26985) | 7913..8833 | + | 921 | WP_248875053.1 | IS5 family transposase ISVa2 | Transposase |
| ITG12_RS27075 (ITG12_26990) | 9017..9937 | - | 921 | WP_248875217.1 | helix-turn-helix transcriptional regulator | - |
| ITG12_RS27080 | 10176..10361 | - | 186 | WP_248875218.1 | IS91 family transposase ISVsa9 | Transposase |
| ITG12_RS27085 (ITG12_27010) | 11521..12440 | - | 920 | Protein_14 | IS5 family transposase ISVa2 | Transposase |
| ITG12_RS27090 (ITG12_27015) | 12537..12944 | - | 408 | WP_248875220.1 | hypothetical protein | - |
| ITG12_RS27095 (ITG12_27020) | 12999..14474 | - | 1476 | WP_248875222.1 | putative cyclic di-GMP phosphodiesterase PdeD | VF |
| ITG12_RS27100 | 14666..14785 | + | 120 | Protein_17 | IS91 family transposase ISVsa9 | Transposase |
| ITG12_RS27105 (ITG12_27030) | 15202..18282 | - | 3081 | WP_248875224.1 | Ig-like domain-containing protein | - |
| ITG12_RS27110 (ITG12_27035) | 18301..19341 | - | 1041 | WP_248875226.1 | Outer membrane protein A | VF |
| ITG12_RS27115 (ITG12_27040) | 19598..19846 | - | 249 | WP_104038396.1 | hypothetical protein | - |
| ITG12_RS27120 (ITG12_27045) | 20891..21493 | + | 603 | WP_045382851.1 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| ITG12_RS27125 (ITG12_27050) | 21688..21918 | + | 231 | WP_248875228.1 | hypothetical protein | - |
| ITG12_RS27130 (ITG12_27055) | 22038..22649 | - | 612 | WP_248875230.1 | mobile mystery protein B | - |
| ITG12_RS27135 (ITG12_27060) | 22646..23134 | - | 489 | WP_248875232.1 | mobile mystery protein A | - |
| ITG12_RS27760 | 23651..23983 | - | 333 | WP_283102975.1 | hypothetical protein | - |
| ITG12_RS27140 (ITG12_27070) | 24017..24925 | + | 909 | WP_283102976.1 | MFS transporter | - |
| ITG12_RS27145 (ITG12_27075) | 25378..26025 | + | 648 | WP_248875234.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| ITG12_RS27150 (ITG12_27080) | 26520..26648 | + | 129 | WP_248875264.1 | DUF3265 domain-containing protein | - |
| ITG12_RS27155 (ITG12_27085) | 26732..27142 | + | 411 | WP_248875236.1 | GNAT family N-acetyltransferase | - |
| ITG12_RS27160 (ITG12_27090) | 27161..27271 | + | 111 | WP_248875266.1 | DUF3265 domain-containing protein | - |
| ITG12_RS27165 (ITG12_27095) | 27362..27643 | + | 282 | WP_248875238.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| ITG12_RS27170 (ITG12_27100) | 27640..27927 | + | 288 | WP_248875240.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| ITG12_RS27175 (ITG12_27105) | 28528..29871 | - | 1344 | WP_248875242.1 | ISNCY family transposase ISLad2 | Transposase |
| ITG12_RS27180 (ITG12_27110) | 30312..30593 | - | 282 | WP_248875244.1 | hypothetical protein | - |
| ITG12_RS27185 (ITG12_27115) | 30648..31412 | - | 765 | WP_248875246.1 | ParA family protein | - |
| ITG12_RS27190 (ITG12_27120) | 31594..32532 | + | 939 | WP_248875248.1 | Recombination-promoting nuclease RpnA | VF |
| ITG12_RS27195 (ITG12_27125) | 33272..34171 | - | 900 | WP_080637466.1 | hypothetical protein | - |
| ITG12_RS27200 (ITG12_27130) | 34584..35450 | - | 867 | WP_248875250.1 | queuosine precursor transporter | - |
| ITG12_RS27205 (ITG12_27135) | 35443..36051 | - | 609 | WP_045382809.1 | helix-turn-helix transcriptional regulator | - |
| ITG12_RS27210 (ITG12_27140) | 36419..36637 | + | 219 | WP_038888781.1 | hypothetical protein | - |
| ITG12_RS27215 (ITG12_27145) | 37018..37164 | + | 147 | WP_155398296.1 | hypothetical protein | - |
| ITG12_RS27220 (ITG12_27150) | 37229..37558 | + | 330 | WP_038888783.1 | TrbC/VirB2 family protein | - |
| ITG12_RS27225 (ITG12_27155) | 37570..37875 | + | 306 | WP_045417669.1 | conjugal transfer protein TrbD | - |
| ITG12_RS27230 (ITG12_27160) | 37911..40322 | + | 2412 | WP_248875252.1 | conjugal transfer protein TrbE | - |
| ITG12_RS27235 (ITG12_27165) | 40319..41080 | + | 762 | WP_248875254.1 | P-type conjugative transfer protein TrbJ | - |
| ITG12_RS27240 (ITG12_27170) | 41100..42059 | + | 960 | WP_248875256.1 | Putative conjugal transfer protein | VF |
| ITG12_RS27245 (ITG12_27175) | 42056..43372 | + | 1317 | WP_248875258.1 | P-type conjugative transfer protein TrbL | - |
| ITG12_RS27250 (ITG12_27180) | 43385..44050 | + | 666 | WP_248875260.1 | VirB8/TrbF family protein | - |
| ITG12_RS27255 (ITG12_27185) | 44447..45325 | + | 879 | WP_080637468.1 | P-type conjugative transfer protein TrbG | - |
| ITG12_RS27260 (ITG12_27190) | 45322..45744 | + | 423 | WP_045402107.1 | hypothetical protein | - |
| ITG12_RS27265 (ITG12_27195) | 45737..46954 | + | 1218 | WP_248875262.1 | Type IV secretion system protein virB10 | VF |
| ITG12_RS27270 (ITG12_27200) | 47134..47802 | + | 669 | WP_248875133.1 | hypothetical protein | - |
| ITG12_RS27275 (ITG12_27205) | 47802..49283 | + | 1482 | WP_248875267.1 | Outer membrane lipoprotein BfpB | VF |
| ITG12_RS27280 (ITG12_27210) | 49283..50395 | + | 1113 | WP_248875135.1 | hypothetical protein | - |
| ITG12_RS27285 (ITG12_27215) | 50397..51023 | + | 627 | WP_248875137.1 | hypothetical protein | - |
| ITG12_RS27290 (ITG12_27220) | 51020..52642 | + | 1623 | WP_248875139.1 | ATPase, T2SS/T4P/T4SS family | - |
| ITG12_RS27295 (ITG12_27225) | 52639..53637 | + | 999 | WP_248875142.1 | hypothetical protein | - |
| ITG12_RS27300 (ITG12_27230) | 53650..54213 | + | 564 | WP_248875144.1 | hypothetical protein | - |
| ITG12_RS27305 (ITG12_27235) | 54213..54740 | + | 528 | WP_248875146.1 | hypothetical protein | - |
| ITG12_RS27310 (ITG12_27240) | 54737..55696 | + | 960 | WP_248875148.1 | type II secretion system protein | - |
| ITG12_RS27315 (ITG12_27245) | 55710..56090 | + | 381 | WP_248875150.1 | hypothetical protein | - |
| ITG12_RS27320 (ITG12_27250) | 56279..57310 | + | 1032 | WP_248875152.1 | trypsin-like serine protease | - |
| ITG12_RS27325 (ITG12_27255) | 57424..57708 | + | 285 | WP_248875154.1 | helix-turn-helix domain-containing protein | - |
| ITG12_RS27330 (ITG12_27260) | 57712..58095 | - | 384 | WP_248875156.1 | hypothetical protein | - |
| ITG12_RS27335 (ITG12_27265) | 58365..58877 | + | 513 | WP_248875158.1 | conjugative transfer signal peptidase TraF | - |
| ITG12_RS27340 (ITG12_27270) | 58884..59399 | + | 516 | WP_102388093.1 | Type IV secretion system protein virB1 | VF |
| ITG12_RS27345 (ITG12_27275) | 59747..60037 | + | 291 | WP_248875160.1 | hypothetical protein | - |
| ITG12_RS27350 (ITG12_27280) | 60127..60708 | + | 582 | WP_248875162.1 | hypothetical protein | - |
| ITG12_RS27355 (ITG12_27285) | 60719..61018 | + | 300 | WP_248875164.1 | hypothetical protein | - |
| ITG12_RS27360 (ITG12_27290) | 61015..61554 | + | 540 | WP_248875166.1 | hypothetical protein | - |
| ITG12_RS27365 (ITG12_27295) | 61895..62302 | + | 408 | WP_248875168.1 | H-NS family nucleoid-associated regulatory protein | - |
| ITG12_RS27370 (ITG12_27300) | 63294..65228 | + | 1935 | WP_248875170.1 | TraM recognition domain-containing protein | - |
| ITG12_RS27375 (ITG12_27305) | 65225..65764 | + | 540 | WP_248875172.1 | DUF1845 domain-containing protein | - |
| ITG12_RS27380 (ITG12_27310) | 65761..66501 | + | 741 | WP_248875174.1 | hypothetical protein | Relaxase |
| ITG12_RS27385 (ITG12_27315) | 66568..68778 | + | 2211 | WP_248875176.1 | DNA topoisomerase | - |
| ITG12_RS27390 | 68907..69191 | + | 285 | WP_038888832.1 | hypothetical protein | - |
| ITG12_RS27395 (ITG12_27320) | 69279..69539 | - | 261 | WP_105069481.1 | hypothetical protein | - |
| ITG12_RS27400 (ITG12_27325) | 69599..70015 | - | 417 | WP_248875178.1 | hypothetical protein | - |
| ITG12_RS27405 (ITG12_27330) | 70103..70516 | - | 414 | WP_178310012.1 | antirestriction protein | - |
| ITG12_RS27410 (ITG12_27335) | 70676..71014 | - | 339 | WP_248875180.1 | hypothetical protein | - |
| ITG12_RS27415 (ITG12_27340) | 71112..72005 | - | 894 | WP_248875182.1 | zincin-like metallopeptidase domain-containing protein | - |
| ITG12_RS27420 (ITG12_27345) | 72115..72339 | - | 225 | WP_248875184.1 | hypothetical protein | - |
| ITG12_RS27425 (ITG12_27350) | 72415..72945 | - | 531 | WP_248875186.1 | antirestriction protein | - |
| ITG12_RS27430 (ITG12_27355) | 73007..73345 | - | 339 | WP_248875188.1 | hypothetical protein | - |
| ITG12_RS27435 (ITG12_27360) | 73751..74975 | + | 1225 | Protein_85 | IS256 family transposase ISVa19 | Transposase |
| ITG12_RS27440 (ITG12_27365) | 75179..75826 | + | 648 | WP_248875190.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| ITG12_RS27445 (ITG12_27370) | 76121..78811 | + | 2691 | WP_248875192.1 | hypothetical protein | - |
| ITG12_RS27450 | 79173..79361 | + | 189 | Protein_88 | resolvase | - |
| ITG12_RS27455 (ITG12_27375) | 79336..79638 | - | 303 | WP_248875194.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| ITG12_RS27460 (ITG12_27380) | 79638..79898 | - | 261 | WP_248875196.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| ITG12_RS27465 (ITG12_27385) | 80102..81311 | + | 1210 | Protein_91 | IS3 family transposase | - |
| ITG12_RS27470 (ITG12_27390) | 81349..81687 | - | 339 | WP_248875198.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| ITG12_RS27475 (ITG12_27395) | 81698..81943 | - | 246 | WP_021018379.1 | prevent-host-death protein | - |
| ITG12_RS27480 (ITG12_27400) | 82605..83081 | - | 477 | WP_248875199.1 | hypothetical protein | - |
| ITG12_RS27485 (ITG12_27405) | 83172..83423 | + | 252 | WP_248875201.1 | hypothetical protein | - |
| ITG12_RS27490 | 83522..83899 | - | 378 | Protein_96 | transposase | - |
| ITG12_RS27495 (ITG12_27415) | 84350..85840 | - | 1491 | Protein_97 | Arylsulfatase | VF |
| ITG12_RS27500 (ITG12_27420) | 86247..88775 | + | 2529 | WP_248875203.1 | Dermonecrotic toxin | VF |
| ITG12_RS27505 (ITG12_27425) | 89180..90526 | + | 1347 | WP_248875205.1 | Sphingomyelinase C | VF |
| ITG12_RS27510 (ITG12_27430) | 90656..91880 | + | 1225 | Protein_100 | IS256 family transposase ISVa19 | Transposase |
| ITG12_RS27515 | 91909..92052 | + | 144 | Protein_101 | IS110 family transposase | - |
| ITG12_RS27520 (ITG12_27435) | 92574..93344 | + | 771 | WP_248875207.1 | alpha/beta hydrolase | - |
| ITG12_RS27525 (ITG12_27440) | 93463..93698 | - | 236 | Protein_103 | IS256 family transposase ISVa19 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|