MGE detailed information
MGE type: Prophage MGE length: 43213 bp
Accession: NZ_CP080235 Location: 794941..838153 Organism: Escherichia coli O139:H1 strain W13-16 Replicon: chromosome
Accession: NZ_CP080235 Location: 794941..838153 Organism: Escherichia coli O139:H1 strain W13-16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KZW92_RS04005 (791454) | 791454..792200 | + | 747 | WP_000636575.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| KZW92_RS04010 (792289) | 792289..792975 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| KZW92_RS04015 (793152) | 793152..793355 | + | 204 | WP_063085277.1 | putative selenium delivery protein YdfZ | - |
| KZW92_RS04020 (793391) | 793391..794851 | - | 1461 | WP_000527819.1 | mannitol dehydrogenase family protein | - |
| KZW92_RS04025 (794941) | 794941..796224 | - | 1284 | Protein_800 | MHS family MFS transporter YdfJ | - |
| KZW92_RS04030 (796828) | 796828..796941 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| KZW92_RS04035 (797010) | 797010..797243 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| KZW92_RS04040 (797560) | 797560..798150 | + | 591 | WP_000086525.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| KZW92_RS04045 (798248) | 798248..798823 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| KZW92_RS04050 (798823) | 798823..799464 | - | 642 | Protein_805 | tail fiber protein | - |
| KZW92_RS04060 (800800) | 800800..802371 | - | 1572 | WP_000381442.1 | IS66 family transposase IS679 | Transposase |
| KZW92_RS04065 (802391) | 802391..802738 | - | 348 | WP_000624618.1 | IS66 family transposase ISCro1 | Transposase |
| KZW92_RS04070 (802738) | 802738..803388 | - | 651 | WP_000993956.1 | IS66 family transposase IS679 | Transposase |
| KZW92_RS04075 (803386) | 803386..804836 | - | 1451 | Protein_809 | phage terminase large subunit family protein | - |
| KZW92_RS04080 (804811) | 804811..805356 | - | 546 | WP_000453611.1 | DNA-packaging protein | - |
| KZW92_RS04085 (805745) | 805745..805978 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| KZW92_RS04090 (806036) | 806036..806446 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| KZW92_RS04095 (806598) | 806598..806771 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| KZW92_RS04100 (806943) | 806943..807098 | - | 156 | WP_001309517.1 | protein YnfN | - |
| KZW92_RS04105 (807178) | 807178..807243 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| KZW92_RS04110 (807246) | 807246..807434 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| KZW92_RS04115 (807445) | 807445..807657 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| KZW92_RS04120 (808021) | 808021..808518 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| KZW92_RS04125 (808515) | 808515..809048 | - | 534 | WP_001092971.1 | lysozyme | - |
| KZW92_RS04130 (809045) | 809045..809356 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| KZW92_RS04135 (809361) | 809361..809576 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| KZW92_RS04140 (809796) | 809796..809966 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| KZW92_RS04145 (810330) | 810330..810545 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| KZW92_RS04150 (810846) | 810846..811058 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| KZW92_RS04155 (811113) | 811113..811202 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| KZW92_RS04160 (811480) | 811480..812232 | - | 753 | WP_001047135.1 | antitermination protein | - |
| KZW92_RS04165 (812246) | 812246..813295 | - | 1050 | WP_063085032.1 | DUF968 domain-containing protein | - |
| KZW92_RS04170 (813297) | 813297..813575 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| KZW92_RS04175 (813642) | 813642..813893 | - | 252 | WP_000980994.1 | protein Rem | - |
| KZW92_RS04180 (814110) | 814110..814265 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| KZW92_RS04185 (814337) | 814337..814624 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| KZW92_RS04190 (814624) | 814624..814863 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| KZW92_RS04195 (814888) | 814888..815193 | + | 306 | WP_001326990.1 | protein YdfV | - |
| KZW92_RS04200 (815396) | 815396..815728 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| KZW92_RS25710 (816190) | 816190..816339 | - | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| KZW92_RS04205 (816460) | 816460..817482 | - | 1023 | Protein_836 | ISNCY family transposase ISCARN112 | Transposase |
| KZW92_RS04210 (818272) | 818272..818559 | - | 288 | Protein_837 | hypothetical protein | - |
| KZW92_RS04215 (819037) | 819037..819526 | - | 490 | Protein_838 | class I SAM-dependent methyltransferase | - |
| KZW92_RS04220 (819523) | 819523..819663 | - | 141 | Protein_839 | DUF977 family protein | - |
| KZW92_RS04225 (819661) | 819661..819846 | - | 186 | Protein_840 | hypothetical protein | - |
| KZW92_RS04230 (819830) | 819830..820060 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| KZW92_RS04235 (820144) | 820144..820551 | + | 408 | WP_063085987.1 | DNA-binding transcriptional dual regulator DicA | - |
| KZW92_RS04240 (820718) | 820718..820873 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| KZW92_RS25715 (820875) | 820875..821003 | + | 129 | WP_000344964.1 | protein YdfB | - |
| KZW92_RS04245 (821033) | 821033..821251 | + | 219 | WP_001171942.1 | protein YdfC | - |
| KZW92_RS04250 (821819) | 821819..822007 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| KZW92_RS04255 (822004) | 822004..822195 | + | 192 | WP_063085989.1 | lysis protein YdfD | - |
| KZW92_RS04260 (822288) | 822288..824759 | + | 2472 | WP_000048342.1 | exonuclease | - |
| KZW92_RS04265 (824832) | 824832..825083 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| KZW92_RS04270 (825118) | 825118..826398 | + | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| KZW92_RS04275 (826586) | 826586..827605 | - | 1020 | WP_000836035.1 | Zn-dependent oxidoreductase | - |
| KZW92_RS04280 (827617) | 827617..828831 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| KZW92_RS04285 (829037) | 829037..829363 | - | 327 | WP_001314753.1 | YnfA family protein | - |
| KZW92_RS04290 (829498) | 829498..829839 | + | 342 | WP_000705205.1 | DUF1283 family protein | - |
| KZW92_RS04295 (829874) | 829874..830434 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| KZW92_RS04300 (830437) | 830437..831147 | - | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
| KZW92_RS04305 (831255) | 831255..831560 | + | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| KZW92_RS04310 (831759) | 831759..834185 | + | 2427 | WP_000041646.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| KZW92_RS04315 (834246) | 834246..836669 | + | 2424 | WP_074150141.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| KZW92_RS04320 (836680) | 836680..837297 | + | 618 | WP_063085992.1 | dimethylsulfoxide reductase subunit B | - |
| KZW92_RS04325 (837299) | 837299..838153 | + | 855 | WP_063085994.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| KZW92_RS04330 (838196) | 838196..838810 | + | 615 | WP_063085996.1 | Tat proofreading chaperone DmsD | - |
| KZW92_RS04335 (838968) | 838968..840260 | + | 1293 | WP_071591524.1 | voltage-gated ClC-type chloride channel ClcB | - |
| KZW92_RS04340 (840213) | 840213..840908 | - | 696 | WP_000919226.1 | dethiobiotin synthase | - |
| KZW92_RS04345 (841033) | 841033..842253 | - | 1221 | WP_000225257.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|