MGE detailed information
MGE type: Prophage MGE length: 46750 bp
Accession: NZ_CP080235 Location: 542944..589693 Organism: Escherichia coli O139:H1 strain W13-16 Replicon: chromosome
Accession: NZ_CP080235 Location: 542944..589693 Organism: Escherichia coli O139:H1 strain W13-16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KZW92_RS02775 (538933) | 538933..538980 | + | 48 | WP_211180494.1 | protein YnaN | - |
| KZW92_RS02780 (538994) | 538994..539977 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| KZW92_RS02785 (540455) | 540455..541828 | + | 1374 | WP_063085924.1 | ATP-dependent RNA helicase DbpA | - |
| KZW92_RS02790 (541957) | 541957..542892 | - | 936 | WP_001157382.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| KZW92_RS02795 (542944) | 542944..544179 | - | 1236 | WP_024168543.1 | Putative defective protein IntQ ; Integrase | Integrase |
| KZW92_RS02800 (544181) | 544181..544396 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (544500) | 544500..544678 | + | 179 | NuclAT_1 | - | Antitoxin Detail |
| - (544500) | 544500..544678 | + | 179 | NuclAT_1 | - | Antitoxin Detail |
| - (544500) | 544500..544678 | + | 179 | NuclAT_1 | - | Antitoxin Detail |
| - (544500) | 544500..544678 | + | 179 | NuclAT_1 | - | Antitoxin Detail |
| KZW92_RS02805 (544496) | 544496..544684 | - | 189 | WP_001372676.1 | DUF1187 family protein | - |
| KZW92_RS02810 (544677) | 544677..544871 | - | 195 | WP_021500490.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| KZW92_RS02815 (544935) | 544935..545987 | - | 1053 | WP_001004412.1 | RecT family recombinase | - |
| KZW92_RS02820 (545999) | 545999..549121 | - | 3123 | WP_219789599.1 | exodeoxyribonuclease VIII | - |
| KZW92_RS02825 (549223) | 549223..549498 | - | 276 | WP_001351479.1 | hypothetical protein | - |
| KZW92_RS02830 (549573) | 549573..549737 | - | 165 | WP_236265422.1 | Rtr1/RPAP2 family protein phosphatase | - |
| KZW92_RS02835 (549703) | 549703..549939 | - | 237 | WP_001093898.1 | DUF1482 family protein | - |
| KZW92_RS02840 (550088) | 550088..550360 | - | 273 | WP_001156286.1 | hypothetical protein | - |
| KZW92_RS02845 (550783) | 550783..550935 | - | 153 | WP_000379561.1 | DUF1391 family protein | - |
| KZW92_RS02850 (551176) | 551176..551640 | - | 465 | WP_001253182.1 | helix-turn-helix domain-containing protein | - |
| KZW92_RS02855 (551745) | 551745..552020 | + | 276 | WP_000171138.1 | YdaS family helix-turn-helix protein | - |
| KZW92_RS02860 (552004) | 552004..552426 | + | 423 | WP_000702031.1 | toxin YdaT family protein | - |
| KZW92_RS25675 (552504) | 552504..552950 | + | 447 | Protein_565 | hypothetical protein | - |
| KZW92_RS25680 (553332) | 553332..553640 | + | 309 | Protein_566 | hypothetical protein | - |
| KZW92_RS02870 (553647) | 553647..554393 | + | 747 | WP_219789601.1 | ATP-binding protein | - |
| KZW92_RS02875 (554416) | 554416..555147 | + | 732 | WP_219789602.1 | DUF1627 domain-containing protein | - |
| KZW92_RS02880 (555153) | 555153..555470 | + | 318 | WP_086186330.1 | DNA-binding protein | - |
| KZW92_RS02885 (555467) | 555467..555766 | + | 300 | WP_047628434.1 | DUF4406 domain-containing protein | - |
| KZW92_RS25685 (555759) | 555759..556331 | + | 573 | WP_236468293.1 | hypothetical protein | - |
| KZW92_RS02895 (556426) | 556426..556644 | + | 219 | WP_151316973.1 | DUF4014 family protein | - |
| KZW92_RS02900 (556646) | 556646..557176 | + | 531 | WP_151316972.1 | DUF551 domain-containing protein | - |
| KZW92_RS02905 (557176) | 557176..557568 | + | 393 | WP_219789604.1 | hypothetical protein | - |
| KZW92_RS02910 (557861) | 557861..558016 | + | 156 | WP_000813269.1 | type I toxin-antitoxin system toxin HokD | - |
| KZW92_RS25690 (558295) | 558295..558372 | + | 78 | Protein_576 | hypothetical protein | - |
| KZW92_RS02920 (558528) | 558528..559127 | + | 600 | WP_000940341.1 | DUF1367 family protein | - |
| KZW92_RS02925 (559127) | 559127..559417 | + | 291 | WP_000247765.1 | DUF1364 domain-containing protein | - |
| KZW92_RS02930 (559414) | 559414..559956 | + | 543 | WP_000640111.1 | DUF1133 family protein | - |
| KZW92_RS02935 (560344) | 560344..561069 | + | 726 | WP_001774831.1 | Pertussis toxin subunit 1 | VF |
| KZW92_RS02940 (561137) | 561137..561562 | + | 426 | WP_000823297.1 | subtilase family AB5 toxin binding subunit | - |
| KZW92_RS02945 (561620) | 561620..562012 | + | 393 | WP_001294583.1 | putative holin | - |
| KZW92_RS02950 (562002) | 562002..562277 | + | 276 | WP_000950565.1 | phage holin family protein | - |
| KZW92_RS02955 (562280) | 562280..562657 | + | 378 | WP_000014555.1 | M15 family metallopeptidase | - |
| KZW92_RS02960 (562869) | 562869..563438 | + | 570 | WP_001056890.1 | phage antirepressor N-terminal domain-containing protein | - |
| KZW92_RS02965 (563422) | 563422..563766 | - | 345 | WP_122990740.1 | hypothetical protein | - |
| KZW92_RS02970 (563810) | 563810..564016 | + | 207 | WP_001208684.1 | Rz1 family lipoprotein | - |
| KZW92_RS02975 (564513) | 564513..564764 | + | 252 | WP_000613572.1 | hypothetical protein | - |
| KZW92_RS02980 (564820) | 564820..566033 | + | 1214 | WP_165789362.1 | IS3 family transposase IS1203 | Transposase |
| KZW92_RS02985 (566081) | 566081..567172 | + | 1092 | WP_000089452.1 | terminase small subunit | - |
| KZW92_RS02990 (567162) | 567162..567764 | + | 603 | Protein_591 | terminase | - |
| KZW92_RS02995 (567821) | 567821..569257 | + | 1437 | WP_000807713.1 | DUF1073 domain-containing protein | - |
| KZW92_RS03000 (569202) | 569202..570035 | + | 834 | WP_001018387.1 | hypothetical protein | - |
| KZW92_RS03005 (570037) | 570037..571230 | + | 1194 | WP_258055309.1 | DUF2213 domain-containing protein | - |
| KZW92_RS03010 (571271) | 571271..571702 | + | 432 | WP_000613368.1 | hypothetical protein | - |
| KZW92_RS03015 (571699) | 571699..572316 | + | 618 | WP_064226517.1 | hypothetical protein | - |
| KZW92_RS03020 (572381) | 572381..574459 | + | 2079 | WP_219789606.1 | transglycosylase SLT domain-containing protein | - |
| KZW92_RS03025 (574463) | 574463..575131 | + | 669 | WP_064226515.1 | hypothetical protein | - |
| KZW92_RS03030 (575128) | 575128..575394 | + | 267 | WP_064226514.1 | hypothetical protein | - |
| KZW92_RS03035 (575394) | 575394..576401 | + | 1008 | WP_105281782.1 | hypothetical protein | - |
| KZW92_RS03040 (576401) | 576401..577114 | + | 714 | WP_042966856.1 | phage baseplate protein | - |
| KZW92_RS03045 (577568) | 577568..577915 | + | 348 | WP_001261328.1 | hypothetical protein | - |
| KZW92_RS03050 (577891) | 577891..578457 | - | 567 | WP_219789607.1 | antA/AntB antirepressor family protein | - |
| KZW92_RS03055 (578795) | 578795..579478 | + | 684 | WP_063080809.1 | hypothetical protein | - |
| KZW92_RS03060 (579514) | 579514..580005 | - | 492 | WP_063080808.1 | hypothetical protein | - |
| KZW92_RS03065 (580020) | 580020..581246 | + | 1227 | WP_001421090.1 | baseplate J/gp47 family protein | - |
| KZW92_RS03070 (581230) | 581230..581856 | + | 627 | WP_001199731.1 | hypothetical protein | - |
| KZW92_RS03075 (581853) | 581853..583328 | + | 1476 | WP_219789609.1 | phage tail protein | - |
| KZW92_RS03080 (583331) | 583331..583879 | + | 549 | WP_219789611.1 | tail fiber assembly protein | - |
| KZW92_RS03085 (583903) | 583903..585897 | + | 1995 | WP_219789612.1 | prophage tail fiber N-terminal domain-containing protein | - |
| KZW92_RS03090 (585897) | 585897..586460 | + | 564 | WP_120150339.1 | DUF4376 domain-containing protein | - |
| KZW92_RS03095 (587000) | 587000..587434 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
| KZW92_RS03100 (587575) | 587575..588708 | - | 1134 | WP_063085886.1 | porin OmpN | - |
| KZW92_RS03105 (588996) | 588996..589693 | + | 698 | WP_236281370.1 | IS1 family transposase | - |
| KZW92_RS03110 (589847) | 589847..593371 | - | 3525 | WP_063085515.1 | pyruvate:ferredoxin (flavodoxin) oxidoreductase | - |
| KZW92_RS03115 (593645) | 593645..593911 | + | 267 | WP_001295715.1 | DUF333 domain-containing protein | - |
| KZW92_RS03120 (593908) | 593908..594330 | - | 423 | WP_001309480.1 | heat shock protein HslJ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|