MGE detailed information
MGE type: Genomic_island MGE length: 50135 bp
Accession: NZ_CP080235 Location: 3691900..3742034 Organism: Escherichia coli O139:H1 strain W13-16 Replicon: chromosome
Accession: NZ_CP080235 Location: 3691900..3742034 Organism: Escherichia coli O139:H1 strain W13-16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KZW92_RS17965 (3688307) | 3688307..3689026 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| KZW92_RS17970 (3689023) | 3689023..3690654 | - | 1632 | WP_001216482.1 | sensor histidine kinase | - |
| KZW92_RS17975 (3690834) | 3690834..3691064 | + | 231 | WP_001550470.1 | 4Fe-4S mono-cluster protein YjdI | - |
| KZW92_RS17980 (3691076) | 3691076..3691348 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| KZW92_RS17985 (3691576) | 3691576..3691872 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | - |
| KZW92_RS17990 (3691900) | 3691900..3692073 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | - |
| KZW92_RS17995 (3692192) | 3692192..3693709 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| KZW92_RS18000 (3693946) | 3693946..3695403 | - | 1458 | WP_001550473.1 | dipeptide/tripeptide permease DtpC | - |
| KZW92_RS18005 (3695462) | 3695462..3697609 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| KZW92_RS18010 (3697689) | 3697689..3699023 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| KZW92_RS18015 (3699389) | 3699389..3700927 | - | 1539 | WP_001187196.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| KZW92_RS18020 (3701676) | 3701676..3702518 | - | 843 | WP_063086391.1 | DUF4942 domain-containing protein | - |
| KZW92_RS18025 (3702603) | 3702603..3702800 | - | 198 | WP_001374283.1 | DUF957 domain-containing protein | - |
| KZW92_RS18030 (3702812) | 3702812..3703300 | - | 489 | WP_000779171.1 | DUF5983 family protein | - |
| KZW92_RS18035 (3703297) | 3703297..3703674 | - | 378 | WP_000854800.1 | TA system toxin CbtA family protein | Toxin Detail |
| KZW92_RS18040 (3703764) | 3703764..3704132 | - | 369 | WP_032178229.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| KZW92_RS18045 (3704182) | 3704182..3704724 | - | 543 | Protein_3534 | antitoxin of toxin-antitoxin stability system | - |
| KZW92_RS18050 (3704724) | 3704724..3705257 | - | 534 | Protein_3535 | DUF945 domain-containing protein | - |
| KZW92_RS18055 (3705585) | 3705585..3708431 | - | 2847 | WP_063086393.1 | Ag43/Cah family autotransporter adhesin | - |
| KZW92_RS18060 (3708803) | 3708803..3709675 | - | 873 | WP_001069689.1 | GTPase family protein | - |
| KZW92_RS18065 (3710858) | 3710858..3712363 | + | 1506 | WP_063086396.1 | YfjI family protein | - |
| KZW92_RS18070 (3712478) | 3712478..3713050 | - | 573 | WP_001170556.1 | hypothetical protein | - |
| KZW92_RS18075 (3713136) | 3713136..3713342 | - | 207 | WP_001025263.1 | AlpA family transcriptional regulator | - |
| KZW92_RS18080 (3714045) | 3714045..3714257 | + | 213 | WP_000453333.1 | hemolysin expression modulator Hha | - |
| KZW92_RS25820 (3714596) | 3714596..3714793 | - | 198 | WP_074156802.1 | hypothetical protein | - |
| KZW92_RS18085 (3714997) | 3714997..3715566 | + | 570 | WP_219789535.1 | inovirus Gp2 family protein | - |
| KZW92_RS18090 (3715826) | 3715826..3716209 | + | 384 | WP_000270991.1 | putative zinc ribbon protein | - |
| KZW92_RS18095 (3716206) | 3716206..3716619 | + | 414 | WP_001013297.1 | putative zinc ribbon protein | - |
| KZW92_RS18100 (3716625) | 3716625..3716795 | + | 171 | WP_001216315.1 | hypothetical protein | - |
| KZW92_RS18105 (3716929) | 3716929..3717552 | + | 624 | WP_001364382.1 | hypothetical protein | - |
| KZW92_RS18110 (3717648) | 3717648..3717881 | + | 234 | WP_000124191.1 | hypothetical protein | - |
| KZW92_RS18115 (3717934) | 3717934..3718125 | - | 192 | WP_001287884.1 | DUF4222 domain-containing protein | - |
| KZW92_RS18120 (3718841) | 3718841..3719095 | + | 255 | WP_096112687.1 | VasL domain-containing protein | - |
| KZW92_RS18125 (3719334) | 3719334..3720608 | + | 1275 | WP_219789537.1 | hypothetical protein | - |
| KZW92_RS18130 (3720740) | 3720740..3722524 | + | 1785 | WP_000269401.1 | P-loop NTPase fold protein | - |
| KZW92_RS18135 (3722524) | 3722524..3723276 | + | 753 | WP_000537317.1 | hypothetical protein | - |
| KZW92_RS18140 (3723273) | 3723273..3724577 | + | 1305 | WP_000192872.1 | hypothetical protein | - |
| KZW92_RS18145 (3724625) | 3724625..3725299 | + | 675 | WP_228997564.1 | TatD family hydrolase | - |
| KZW92_RS18150 (3725851) | 3725851..3726411 | - | 561 | WP_224471524.1 | SLATT domain-containing protein | - |
| KZW92_RS18155 (3726434) | 3726434..3727762 | - | 1329 | WP_000019626.1 | nucleotidyltransferase | - |
| KZW92_RS18160 (3727897) | 3727897..3728340 | - | 444 | Protein_3558 | IS66 family transposase ISEc43 | Transposase |
| KZW92_RS18165 (3728395) | 3728395..3728709 | + | 315 | Protein_3559 | IS66 family transposase ISCro1 | Transposase |
| KZW92_RS18170 (3728719) | 3728719..3729111 | - | 393 | Protein_3560 | IS4 family transposase IS4 | Transposase |
| KZW92_RS18175 (3729143) | 3729143..3729298 | - | 156 | WP_158304851.1 | IS66 family transposase IS679 | Transposase |
| KZW92_RS18180 (3729492) | 3729492..3730754 | - | 1263 | WP_063086402.1 | hypothetical protein ; Integrase | Integrase |
| KZW92_RS18185 (3731101) | 3731101..3731979 | + | 879 | WP_001023819.1 | Iron-sulfur cluster carrier protein | VF |
| KZW92_RS18190 (3731973) | 3731973..3732233 | + | 261 | WP_000240583.1 | hypothetical protein | - |
| KZW92_RS18195 (3732504) | 3732504..3733001 | + | 498 | Protein_3565 | replicative DNA helicase | - |
| KZW92_RS18200 (3733000) | 3733000..3733434 | + | 435 | Protein_3566 | hypothetical protein | VF |
| KZW92_RS18205 (3733431) | 3733431..3734204 | + | 774 | WP_000003512.1 | hypothetical protein | - |
| KZW92_RS18210 (3734211) | 3734211..3735812 | + | 1602 | WP_219789539.1 | integrating conjugative element protein | - |
| KZW92_RS18215 (3735805) | 3735805..3736140 | + | 336 | WP_001030563.1 | hypothetical protein | - |
| KZW92_RS18220 (3736143) | 3736143..3737717 | + | 1575 | WP_219789669.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| KZW92_RS18225 (3737755) | 3737755..3738144 | - | 390 | WP_024198197.1 | hypothetical protein | - |
| KZW92_RS18230 (3738271) | 3738271..3738834 | + | 564 | WP_000949412.1 | hypothetical protein | - |
| KZW92_RS18235 (3739054) | 3739054..3739458 | - | 405 | WP_000414129.1 | hypothetical protein | - |
| KZW92_RS18240 (3740515) | 3740515..3741417 | + | 903 | WP_000091035.1 | integrase domain-containing protein | - |
| KZW92_RS18245 (3741450) | 3741450..3741773 | + | 324 | WP_230909552.1 | hypothetical protein | - |
| KZW92_RS18250 (3742153) | 3742153..3742503 | + | 351 | WP_128972544.1 | hypothetical protein | - |
| KZW92_RS18255 (3742613) | 3742613..3745999 | + | 3387 | WP_258055138.1 | inverse autotransporter beta domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|