MGE detailed information
MGE type: Prophage MGE length: 33907 bp
Accession: NZ_CP080233 Location: 2608404..2642310 Organism: Escherichia coli O139:H1 strain P15-25 Replicon: chromosome
Accession: NZ_CP080233 Location: 2608404..2642310 Organism: Escherichia coli O139:H1 strain P15-25 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KZW90_RS12660 (2604917) | 2604917..2605663 | + | 747 | WP_000636575.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| KZW90_RS12665 (2605752) | 2605752..2606438 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| KZW90_RS12670 (2606615) | 2606615..2606818 | + | 204 | WP_063085277.1 | putative selenium delivery protein YdfZ | - |
| KZW90_RS12675 (2606854) | 2606854..2608314 | - | 1461 | WP_000527819.1 | mannitol dehydrogenase family protein | - |
| KZW90_RS12680 (2608404) | 2608404..2609687 | - | 1284 | Protein_2484 | MHS family MFS transporter YdfJ | - |
| KZW90_RS12685 (2610291) | 2610291..2610404 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| KZW90_RS12690 (2610473) | 2610473..2610706 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| KZW90_RS12695 (2611023) | 2611023..2611613 | + | 591 | WP_000086525.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| KZW90_RS12700 (2611711) | 2611711..2612286 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| KZW90_RS25110 (2612286) | 2612286..2614103 | - | 1818 | Protein_2489 | tail fiber protein | - |
| KZW90_RS12710 (2614105) | 2614105..2615586 | - | 1482 | Protein_2490 | phage terminase large subunit family protein | - |
| KZW90_RS12715 (2615561) | 2615561..2616106 | - | 546 | WP_000453611.1 | DNA-packaging protein | - |
| KZW90_RS12720 (2616495) | 2616495..2616728 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| KZW90_RS12725 (2616786) | 2616786..2617196 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| KZW90_RS12730 (2617348) | 2617348..2617521 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| KZW90_RS12735 (2617693) | 2617693..2617848 | - | 156 | WP_001309517.1 | protein YnfN | - |
| KZW90_RS12740 (2617928) | 2617928..2617993 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| KZW90_RS12745 (2617996) | 2617996..2618184 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| KZW90_RS12750 (2618195) | 2618195..2618407 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| KZW90_RS12755 (2618771) | 2618771..2619268 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| KZW90_RS12760 (2619265) | 2619265..2619798 | - | 534 | WP_001092971.1 | lysozyme | - |
| KZW90_RS12765 (2619795) | 2619795..2620106 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| KZW90_RS12770 (2620111) | 2620111..2620326 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| KZW90_RS12775 (2620546) | 2620546..2620716 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| KZW90_RS12780 (2621080) | 2621080..2621295 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| KZW90_RS12785 (2621596) | 2621596..2621808 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| KZW90_RS12790 (2621863) | 2621863..2621952 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| KZW90_RS12795 (2622230) | 2622230..2622982 | - | 753 | WP_001047135.1 | antitermination protein | - |
| KZW90_RS12800 (2622996) | 2622996..2624045 | - | 1050 | WP_063085032.1 | DUF968 domain-containing protein | - |
| KZW90_RS12805 (2624047) | 2624047..2624325 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| KZW90_RS12810 (2624392) | 2624392..2624643 | - | 252 | WP_000980994.1 | protein Rem | - |
| KZW90_RS12815 (2624860) | 2624860..2625015 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| KZW90_RS12820 (2625087) | 2625087..2625374 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| KZW90_RS12825 (2625374) | 2625374..2625613 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| KZW90_RS12830 (2625638) | 2625638..2625943 | + | 306 | WP_001326990.1 | protein YdfV | - |
| KZW90_RS12835 (2626146) | 2626146..2626478 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| KZW90_RS25115 (2626940) | 2626940..2627089 | - | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| KZW90_RS12840 (2627210) | 2627210..2628232 | - | 1023 | Protein_2517 | ISNCY family transposase ISCARN112 | Transposase |
| KZW90_RS12845 (2629022) | 2629022..2629309 | - | 288 | Protein_2518 | hypothetical protein | - |
| KZW90_RS12850 (2629787) | 2629787..2630276 | - | 490 | Protein_2519 | class I SAM-dependent methyltransferase | - |
| KZW90_RS12855 (2630273) | 2630273..2630413 | - | 141 | Protein_2520 | DUF977 family protein | - |
| KZW90_RS12860 (2630411) | 2630411..2630596 | - | 186 | Protein_2521 | hypothetical protein | - |
| KZW90_RS12865 (2630580) | 2630580..2630810 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| KZW90_RS12870 (2630894) | 2630894..2631301 | + | 408 | WP_063085987.1 | DNA-binding transcriptional dual regulator DicA | - |
| KZW90_RS12875 (2631468) | 2631468..2631623 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| KZW90_RS25120 (2631625) | 2631625..2631753 | + | 129 | WP_000344964.1 | protein YdfB | - |
| KZW90_RS12880 (2631783) | 2631783..2632001 | + | 219 | WP_001171942.1 | protein YdfC | - |
| KZW90_RS12885 (2632569) | 2632569..2632757 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| KZW90_RS12890 (2632754) | 2632754..2632945 | + | 192 | WP_063085989.1 | lysis protein YdfD | - |
| KZW90_RS12895 (2633038) | 2633038..2635509 | + | 2472 | WP_000048342.1 | exonuclease | - |
| KZW90_RS12900 (2635582) | 2635582..2635833 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| KZW90_RS12905 (2635868) | 2635868..2637148 | + | 1281 | WP_000876958.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| KZW90_RS12910 (2637336) | 2637336..2638355 | - | 1020 | WP_000836035.1 | Zn-dependent oxidoreductase | - |
| KZW90_RS12915 (2638367) | 2638367..2639581 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| KZW90_RS12920 (2639787) | 2639787..2640113 | - | 327 | WP_001314753.1 | YnfA family protein | - |
| KZW90_RS12925 (2640248) | 2640248..2640589 | + | 342 | WP_000705205.1 | DUF1283 family protein | - |
| KZW90_RS12930 (2640624) | 2640624..2641184 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| KZW90_RS12935 (2641187) | 2641187..2641897 | - | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
| KZW90_RS12940 (2642005) | 2642005..2642310 | + | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| KZW90_RS12945 (2642509) | 2642509..2644935 | + | 2427 | WP_219804703.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|