MGE detailed information
MGE type: Genomic_island MGE length: 38031 bp
Accession: NZ_CP080223 Location: 3851956..3889986 Organism: Escherichia coli O141:H4 strain P13-6 Replicon: chromosome
Accession: NZ_CP080223 Location: 3851956..3889986 Organism: Escherichia coli O141:H4 strain P13-6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| - (3847544) | 3847544..3847624 | - | 81 | NuclAT_12 | - | - |
| - (3847544) | 3847544..3847624 | - | 81 | NuclAT_12 | - | - |
| - (3847544) | 3847544..3847624 | - | 81 | NuclAT_12 | - | - |
| - (3847544) | 3847544..3847624 | - | 81 | NuclAT_12 | - | - |
| KZW89_RS19290 (3848220) | 3848220..3848678 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| KZW89_RS19295 (3848939) | 3848939..3850396 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| KZW89_RS19300 (3850453) | 3850453..3850974 | - | 522 | Protein_3788 | peptide chain release factor H | - |
| KZW89_RS19305 (3850970) | 3850970..3851176 | - | 207 | Protein_3789 | RtcB family protein | - |
| KZW89_RS19310 (3851494) | 3851494..3851946 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| KZW89_RS19315 (3851956) | 3851956..3852354 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| KZW89_RS19320 (3852357) | 3852357..3852650 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| KZW89_RS19325 (3852702) | 3852702..3853758 | - | 1057 | Protein_3793 | DNA polymerase IV | - |
| KZW89_RS19330 (3853829) | 3853829..3854614 | - | 786 | WP_000207552.1 | hypothetical protein | VF |
| KZW89_RS19335 (3854586) | 3854586..3856298 | + | 1713 | Protein_3795 | hypothetical protein | VF |
| KZW89_RS19340 (3856522) | 3856522..3857019 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| KZW89_RS19345 (3857195) | 3857195..3857944 | - | 750 | WP_000056849.1 | hypothetical protein | VF |
| KZW89_RS19350 (3858154) | 3858154..3858414 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| KZW89_RS19355 (3858417) | 3858417..3858695 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| KZW89_RS19360 (3858851) | 3858851..3859591 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| KZW89_RS19365 (3859562) | 3859562..3860329 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| KZW89_RS19370 (3860535) | 3860535..3861113 | - | 579 | WP_000284050.1 | hypothetical protein | VF |
| KZW89_RS19375 (3861353) | 3861353..3863797 | + | 2445 | WP_000973083.1 | hypothetical protein | VF |
| KZW89_RS19380 (3863840) | 3863840..3864286 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| KZW89_RS19385 (3864467) | 3864467..3865237 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| KZW89_RS19390 (3865278) | 3865278..3866414 | - | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| KZW89_RS19395 (3866845) | 3866845..3867021 | - | 177 | WP_000008098.1 | hypothetical protein | - |
| KZW89_RS19400 (3867005) | 3867005..3867238 | - | 234 | WP_024198219.1 | hypothetical protein | - |
| KZW89_RS19405 (3867216) | 3867216..3871448 | - | 4233 | WP_000015445.1 | hypothetical protein | VF |
| KZW89_RS19410 (3871525) | 3871525..3871974 | - | 450 | WP_001372445.1 | RHS element protein dsORF-h1 | - |
| KZW89_RS19415 (3872045) | 3872045..3873181 | - | 1137 | WP_000420722.1 | ISAs1 family transposase ISEc1 | Transposase |
| KZW89_RS19420 (3873650) | 3873650..3874027 | - | 378 | WP_001077738.1 | hypothetical protein | - |
| KZW89_RS19425 (3874027) | 3874027..3875712 | - | 1686 | Protein_3813 | hypothetical protein | VF |
| KZW89_RS19430 (3875712) | 3875712..3877136 | + | 1425 | Protein_3814 | hypothetical protein | VF |
| KZW89_RS19435 (3877130) | 3877130..3877480 | + | 351 | Protein_3815 | hypothetical protein | VF |
| KZW89_RS19440 (3877485) | 3877485..3878897 | + | 1413 | WP_001240525.1 | hypothetical protein | VF |
| KZW89_RS19445 (3879006) | 3879006..3882440 | + | 3435 | WP_122545204.1 | hypothetical protein | VF |
| KZW89_RS19450 (3882451) | 3882451..3883900 | + | 1450 | Protein_3818 | hypothetical protein | VF |
| KZW89_RS19455 (3883827) | 3883827..3884309 | + | 483 | WP_001284199.1 | hypothetical protein | VF |
| KZW89_RS19460 (3884353) | 3884353..3885267 | + | 915 | WP_000908066.1 | hypothetical protein | - |
| KZW89_RS19465 (3885277) | 3885277..3885756 | + | 480 | WP_001236645.1 | protein YkfM | - |
| KZW89_RS19470 (3885893) | 3885893..3886678 | - | 786 | WP_001086141.1 | lipoprotein | - |
| KZW89_RS19480 (3887215) | 3887215..3887946 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| KZW89_RS19485 (3888011) | 3888011..3888478 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| KZW89_RS19490 (3888475) | 3888475..3889197 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| KZW89_RS19495 (3889231) | 3889231..3889986 | + | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| KZW89_RS19500 (3890058) | 3890058..3891416 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| KZW89_RS19505 (3891464) | 3891464..3892060 | - | 597 | Protein_3828 | methyltransferase domain-containing protein | - |
| KZW89_RS19510 (3892091) | 3892091..3892891 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| KZW89_RS19515 (3893132) | 3893132..3894046 | + | 915 | WP_096937629.1 | DNA-binding transcriptional regulator YafC | - |
| KZW89_RS19520 (3894043) | 3894043..3894846 | - | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|