MGE detailed information
MGE type: Prophage MGE length: 58225 bp
Accession: NZ_CP080223 Location: 2880977..2939201 Organism: Escherichia coli O141:H4 strain P13-6 Replicon: chromosome
Accession: NZ_CP080223 Location: 2880977..2939201 Organism: Escherichia coli O141:H4 strain P13-6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KZW89_RS14400 (2877088) | 2877088..2877336 | - | 249 | WP_001065752.1 | protein YmgC | - |
| KZW89_RS14405 (2877449) | 2877449..2877715 | - | 267 | WP_000888772.1 | biofilm/acid-resistance regulator AriR | - |
| KZW89_RS14410 (2877744) | 2877744..2878016 | - | 273 | WP_000858002.1 | two-component-system connector protein YmgA | - |
| KZW89_RS14415 (2878059) | 2878059..2878295 | - | 237 | WP_000554140.1 | regulatory protein YcgZ | - |
| KZW89_RS14420 (2878609) | 2878609..2879820 | + | 1212 | WP_001299269.1 | blue light-responsive regulator BluF | - |
| KZW89_RS14425 (2880025) | 2880025..2880756 | + | 732 | WP_000332303.1 | DNA-binding transcriptional repressor BluR | - |
| KZW89_RS14430 (2880977) | 2880977..2881381 | + | 405 | WP_000373101.1 | DUF1398 domain-containing protein | - |
| KZW89_RS14435 (2881434) | 2881434..2881544 | + | 111 | WP_032082692.1 | hypothetical protein | - |
| KZW89_RS14440 (2881780) | 2881780..2881824 | + | 45 | WP_120795380.1 | protein YmgK | - |
| KZW89_RS14445 (2882081) | 2882081..2882404 | + | 324 | WP_001295666.1 | anti-adapter protein IraM | - |
| KZW89_RS14450 (2882507) | 2882507..2883757 | - | 1251 | WP_000444488.1 | NADP-dependent isocitrate dehydrogenase | - |
| KZW89_RS14455 (2883929) | 2883929..2884582 | + | 654 | WP_001248691.1 | 23S rRNA pseudouridine(2457) synthase RluE | - |
| KZW89_RS14460 (2884592) | 2884592..2885053 | + | 462 | WP_000476093.1 | phosphatase NudJ | - |
| KZW89_RS14465 (2885107) | 2885107..2886213 | + | 1107 | WP_001297484.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
| KZW89_RS14470 (2886249) | 2886249..2886890 | + | 642 | WP_001297479.1 | high frequency lysogenization protein HflD | - |
| KZW89_RS14475 (2886894) | 2886894..2888264 | + | 1371 | WP_000423742.1 | adenylosuccinate lyase | - |
| KZW89_RS14480 (2888433) | 2888433..2889104 | + | 672 | WP_001265471.1 | hypothetical protein | VF |
| KZW89_RS14485 (2889104) | 2889104..2890564 | + | 1461 | WP_000735412.1 | two-component system sensor histidine kinase PhoQ | - |
| KZW89_RS14490 (2890640) | 2890640..2891761 | + | 1122 | WP_000456506.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| KZW89_RS14495 (2891810) | 2891810..2893036 | - | 1227 | WP_000359434.1 | peptidase T | - |
| KZW89_RS14500 (2893286) | 2893286..2894422 | + | 1137 | WP_000531594.1 | hypothetical protein | VF |
| KZW89_RS14505 (2894406) | 2894406..2895269 | + | 864 | WP_000799403.1 | spermidine/putrescine ABC transporter permease PotB | - |
| KZW89_RS14510 (2895498) | 2895498..2896061 | - | 564 | WP_120150376.1 | DUF4376 domain-containing protein | - |
| KZW89_RS14515 (2896061) | 2896061..2897530 | - | 1470 | WP_219789366.1 | prophage tail fiber N-terminal domain-containing protein | - |
| KZW89_RS14520 (2897556) | 2897556..2898656 | - | 1101 | WP_213859200.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| KZW89_RS14525 (2898647) | 2898647..2898865 | - | 219 | WP_001107807.1 | tail protein X | - |
| KZW89_RS14530 (2898840) | 2898840..2899328 | - | 489 | WP_086590086.1 | phage tail protein | - |
| KZW89_RS28835 (2899331) | 2899331..2900269 | - | 939 | WP_258054471.1 | hypothetical protein | - |
| KZW89_RS28840 (2900241) | 2900241..2900984 | - | 744 | WP_249528670.1 | hypothetical protein | - |
| KZW89_RS14540 (2900965) | 2900965..2901102 | - | 138 | WP_156841731.1 | hypothetical protein | - |
| KZW89_RS14545 (2901102) | 2901102..2901404 | - | 303 | WP_001291419.1 | phage tail assembly protein | - |
| KZW89_RS14550 (2901459) | 2901459..2901977 | - | 519 | WP_064578972.1 | phage major tail tube protein | - |
| KZW89_RS14555 (2901974) | 2901974..2903449 | - | 1476 | WP_120150370.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| KZW89_RS14560 (2903505) | 2903505..2904047 | - | 543 | WP_120150368.1 | tail fiber assembly protein | - |
| KZW89_RS14565 (2904050) | 2904050..2905453 | - | 1404 | WP_219789367.1 | phage tail protein | - |
| KZW89_RS14570 (2905450) | 2905450..2906040 | - | 591 | WP_064226391.1 | phage tail protein I | - |
| KZW89_RS14575 (2906033) | 2906033..2906947 | - | 915 | WP_086589946.1 | baseplate J/gp47 family protein | - |
| KZW89_RS14580 (2906922) | 2906922..2907278 | - | 357 | WP_000579232.1 | GPW/gp25 family protein | - |
| KZW89_RS14585 (2907312) | 2907312..2907935 | - | 624 | WP_086589944.1 | phage baseplate assembly protein V | - |
| KZW89_RS14590 (2907919) | 2907919..2908470 | - | 552 | WP_001406275.1 | hypothetical protein | - |
| KZW89_RS14595 (2908482) | 2908482..2909204 | - | 723 | WP_219789368.1 | hypothetical protein | - |
| KZW89_RS14600 (2909185) | 2909185..2909589 | - | 405 | WP_252096646.1 | head-tail joining protein | - |
| KZW89_RS14605 (2909589) | 2909589..2909954 | - | 366 | WP_001372342.1 | DNA-packaging protein FI | - |
| KZW89_RS14610 (2910005) | 2910005..2911033 | - | 1029 | WP_219789369.1 | major capsid protein | - |
| KZW89_RS14615 (2911102) | 2911102..2911437 | - | 336 | WP_064578930.1 | head decoration protein | - |
| KZW89_RS14620 (2911477) | 2911477..2911743 | - | 267 | WP_258054478.1 | hypothetical protein | - |
| KZW89_RS14625 (2911733) | 2911733..2911846 | - | 114 | Protein_2873 | M15 family peptidase | - |
| KZW89_RS14630 (2911849) | 2911849..2912124 | - | 276 | WP_213859204.1 | phage holin family protein | - |
| KZW89_RS14635 (2912114) | 2912114..2912506 | - | 393 | WP_219789370.1 | putative holin | - |
| KZW89_RS14640 (2912595) | 2912595..2912747 | - | 153 | WP_089560638.1 | DUF3927 family protein | - |
| KZW89_RS14645 (2912744) | 2912744..2913169 | - | 426 | WP_000466940.1 | tellurite/colicin resistance protein | - |
| KZW89_RS14660 (2914257) | 2914257..2915303 | - | 1047 | WP_219789371.1 | site-specific DNA-methyltransferase | - |
| KZW89_RS14665 (2915454) | 2915454..2915651 | - | 198 | WP_000917744.1 | hypothetical protein | - |
| KZW89_RS14670 (2915993) | 2915993..2916337 | - | 345 | WP_235144358.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| KZW89_RS14675 (2916588) | 2916588..2917277 | - | 690 | WP_219789372.1 | bacteriophage antitermination protein Q | - |
| KZW89_RS14680 (2917274) | 2917274..2917633 | - | 360 | WP_021562165.1 | RusA family crossover junction endodeoxyribonuclease | - |
| KZW89_RS14685 (2917646) | 2917646..2918695 | - | 1050 | WP_219789373.1 | DUF968 domain-containing protein | - |
| KZW89_RS14690 (2918697) | 2918697..2918969 | - | 273 | WP_032159262.1 | hypothetical protein | - |
| KZW89_RS14695 (2919137) | 2919137..2919292 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| KZW89_RS14700 (2920028) | 2920028..2920342 | - | 315 | Protein_2886 | DUF551 domain-containing protein | - |
| KZW89_RS14705 (2920344) | 2920344..2920562 | - | 219 | WP_219789374.1 | DUF4014 family protein | - |
| KZW89_RS14710 (2920564) | 2920564..2920779 | - | 216 | WP_047655285.1 | hypothetical protein | - |
| KZW89_RS14715 (2920780) | 2920780..2921139 | - | 360 | WP_219789375.1 | hypothetical protein | - |
| KZW89_RS14720 (2921136) | 2921136..2921312 | - | 177 | WP_000753067.1 | hypothetical protein | - |
| KZW89_RS14725 (2921305) | 2921305..2921487 | - | 183 | WP_024238437.1 | hypothetical protein | - |
| KZW89_RS14730 (2921581) | 2921581..2921937 | - | 357 | WP_097423158.1 | hypothetical protein | - |
| KZW89_RS14735 (2921915) | 2921915..2922379 | - | 465 | WP_023908487.1 | hypothetical protein | - |
| KZW89_RS14740 (2922372) | 2922372..2922671 | - | 300 | WP_001266141.1 | DUF4406 domain-containing protein | - |
| KZW89_RS14745 (2922668) | 2922668..2923063 | - | 396 | WP_096982553.1 | DUF977 family protein | - |
| KZW89_RS14750 (2923104) | 2923104..2924051 | - | 948 | WP_089569406.1 | helix-turn-helix domain-containing protein | - |
| KZW89_RS14755 (2924075) | 2924075..2924500 | - | 426 | WP_001605308.1 | toxin YdaT family protein | - |
| KZW89_RS14760 (2924484) | 2924484..2924756 | - | 273 | WP_097330580.1 | YdaS family helix-turn-helix protein | - |
| KZW89_RS14765 (2924866) | 2924866..2925267 | + | 402 | WP_001329851.1 | helix-turn-helix domain-containing protein | - |
| KZW89_RS14770 (2925295) | 2925295..2925486 | + | 192 | WP_097330581.1 | antitoxin | Antitoxin Detail |
| KZW89_RS14775 (2925486) | 2925486..2925773 | + | 288 | WP_000936798.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KZW89_RS14780 (2926047) | 2926047..2926202 | + | 156 | WP_001678562.1 | DUF1391 family protein | - |
| KZW89_RS28845 (2926204) | 2926204..2926332 | + | 129 | WP_000344964.1 | protein YdfB | - |
| KZW89_RS28850 (2926344) | 2926344..2926616 | + | 273 | Protein_2904 | hypothetical protein | - |
| KZW89_RS14790 (2927670) | 2927670..2927867 | + | 198 | WP_000449166.1 | cell division inhibition protein DicB | - |
| KZW89_RS14795 (2927858) | 2927858..2928052 | + | 195 | WP_000538687.1 | DUF1482 family protein | - |
| KZW89_RS14800 (2928144) | 2928144..2930615 | + | 2472 | WP_120150362.1 | exonuclease | - |
| KZW89_RS14805 (2930677) | 2930677..2930946 | + | 270 | WP_000003742.1 | excisionase | - |
| KZW89_RS14810 (2930915) | 2930915..2932033 | + | 1119 | WP_032083071.1 | hypothetical protein ; Integrase | Integrase |
| KZW89_RS14815 (2932200) | 2932200..2932994 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| KZW89_RS14820 (2932991) | 2932991..2934037 | + | 1047 | WP_000759317.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| KZW89_RS14825 (2934095) | 2934095..2934556 | + | 462 | WP_000076376.1 | DUF3592 domain-containing protein | - |
| KZW89_RS14830 (2934553) | 2934553..2935341 | + | 789 | WP_000713462.1 | TPM domain-containing protein | - |
| KZW89_RS14835 (2935461) | 2935461..2936300 | - | 840 | WP_000952737.1 | NAD-dependent protein deacylase | - |
| KZW89_RS14840 (2936316) | 2936316..2937227 | - | 912 | WP_000291270.1 | N-acetylglucosamine kinase | - |
| KZW89_RS14845 (2937256) | 2937256..2938500 | - | 1245 | WP_001251348.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| KZW89_RS14850 (2938500) | 2938500..2939201 | - | 702 | WP_001033694.1 | hypothetical protein | VF |
| KZW89_RS14855 (2939194) | 2939194..2940393 | - | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| KZW89_RS14860 (2940655) | 2940655..2941728 | + | 1074 | WP_000810253.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|