MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 33837 bp
Accession: NZ_CP080143 Location: 1..33837 Organism: Escherichia coli strain PK8241 Replicon: plasmid pPK8241-33kb
Accession: NZ_CP080143 Location: 1..33837 Organism: Escherichia coli strain PK8241 Replicon: plasmid pPK8241-33kb
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KZY05_RS28975 (KZY05_28985) | 1..1005 | + | 1005 | WP_001208090.1 | replication initiation protein | - |
| KZY05_RS28980 (KZY05_28990) | 1445..1783 | - | 339 | WP_000612441.1 | hypothetical protein | VF |
| KZY05_RS28985 (KZY05_28995) | 1982..2269 | + | 288 | WP_000332248.1 | helix-turn-helix transcriptional regulator | - |
| KZY05_RS28990 (KZY05_29000) | 2310..2543 | - | 234 | WP_001056371.1 | EexN family lipoprotein | - |
| KZY05_RS28995 (KZY05_29005) | 2556..3197 | - | 642 | WP_219788501.1 | type IV secretion system protein | - |
| KZY05_RS29000 (KZY05_29010) | 3199..4194 | - | 996 | WP_052989979.1 | type IV secretion system protein | - |
| KZY05_RS29005 (KZY05_29015) | 4527..5138 | + | 612 | WP_000603936.1 | Type IV secretion system protein virB1 | VF |
| KZY05_RS29010 (KZY05_29020) | 5131..5424 | + | 294 | WP_001031683.1 | TrbC/VirB2 family protein | - |
| KZY05_RS29015 (KZY05_29025) | 5482..5802 | + | 321 | WP_001000143.1 | VirB3 family type IV secretion system protein | - |
| KZY05_RS29020 (KZY05_29030) | 5805..8177 | + | 2373 | WP_001195524.1 | VirB4 family type IV secretion system protein | - |
| KZY05_RS29025 (KZY05_29035) | 8308..9045 | + | 738 | WP_052989978.1 | Type IV secretion system protein PtlE | VF |
| KZY05_RS29030 (KZY05_29040) | 9042..9821 | + | 780 | WP_000592647.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| KZY05_RS29035 (KZY05_29045) | 9811..10953 | + | 1143 | WP_000787414.1 | Type IV secretion system protein virB10 | VF |
| KZY05_RS29040 (KZY05_29050) | 10953..11972 | + | 1020 | WP_001287983.1 | Type IV secretion system protein VirB11 | VF |
| KZY05_RS29045 (KZY05_29055) | 12023..13990 | + | 1968 | WP_000726944.1 | type IV secretory system conjugative DNA transfer family protein | - |
| KZY05_RS29050 (KZY05_29060) | 14006..14311 | + | 306 | WP_001223992.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| KZY05_RS29055 (KZY05_29065) | 14452..15039 | + | 588 | WP_000280693.1 | DUF6012 family protein | - |
| KZY05_RS29060 (KZY05_29070) | 15051..17207 | + | 2157 | WP_001235739.1 | type IA DNA topoisomerase | - |
| KZY05_RS29065 (KZY05_29075) | 17370..17555 | + | 186 | WP_000425267.1 | hypothetical protein | - |
| KZY05_RS29690 | 17663..18178 | + | 516 | WP_232380435.1 | hypothetical protein | - |
| KZY05_RS29075 (KZY05_29085) | 18792..18971 | + | 180 | WP_000347021.1 | hypothetical protein | - |
| KZY05_RS29080 (KZY05_29090) | 19167..19415 | - | 249 | WP_000312658.1 | hypothetical protein | - |
| KZY05_RS29085 (KZY05_29095) | 20075..20890 | + | 816 | WP_000018884.1 | Tyrosine recombinase XerD | VF |
| KZY05_RS29090 (KZY05_29100) | 21005..21664 | + | 660 | WP_000516225.1 | peptidyl-arginine deiminase | - |
| KZY05_RS29095 (KZY05_29105) | 22369..22671 | + | 303 | WP_001096505.1 | hypothetical protein | - |
| KZY05_RS29100 (KZY05_29110) | 22749..25946 | - | 3198 | WP_079810359.1 | relaxase | - |
| KZY05_RS29105 (KZY05_29115) | 25943..26278 | - | 336 | WP_000963832.1 | hypothetical protein | Relaxase |
| KZY05_RS29110 (KZY05_29120) | 26624..27031 | + | 408 | WP_064261963.1 | hypothetical protein | - |
| KZY05_RS29115 (KZY05_29125) | 27041..27802 | + | 762 | WP_219788500.1 | conjugal transfer protein TraL | - |
| KZY05_RS29120 (KZY05_29130) | 27799..28503 | + | 705 | WP_001279864.1 | hypothetical protein | - |
| KZY05_RS29125 (KZY05_29135) | 28532..28969 | - | 438 | WP_052989980.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| KZY05_RS29130 (KZY05_29140) | 28994..29176 | - | 183 | WP_000833471.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| KZY05_RS29135 (KZY05_29145) | 29614..29892 | - | 279 | WP_000545934.1 | hypothetical protein | - |
| KZY05_RS29140 (KZY05_29150) | 29950..30279 | - | 330 | WP_000449469.1 | hypothetical protein | - |
| KZY05_RS29145 (KZY05_29155) | 30719..30961 | - | 243 | WP_001450803.1 | hypothetical protein | - |
| KZY05_RS29150 (KZY05_29160) | 30951..31217 | - | 267 | WP_000868275.1 | hypothetical protein | - |
| KZY05_RS29155 (KZY05_29165) | 31268..31492 | - | 225 | WP_000814384.1 | hypothetical protein | - |
| KZY05_RS29160 (KZY05_29170) | 31590..31799 | - | 210 | WP_000866037.1 | hypothetical protein | - |
| KZY05_RS29165 (KZY05_29175) | 31840..32163 | - | 324 | WP_000427402.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|