MGE detailed information
MGE type: Genomic_island MGE length: 9356 bp
Accession: NZ_CP080121 Location: 3984741..3994096 Organism: Escherichia coli strain PK8217 Replicon: chromosome
Accession: NZ_CP080121 Location: 3984741..3994096 Organism: Escherichia coli strain PK8217 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KZO72_RS19350 (3980542) | 3980542..3980880 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| KZO72_RS19355 (3980856) | 3980856..3982553 | + | 1698 | WP_038988893.1 | protein-disulfide reductase DsbD | - |
| KZO72_RS19360 (3982590) | 3982590..3983165 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| KZO72_RS19370 (3983726) | 3983726..3984423 | + | 698 | WP_232379017.1 | IS1 family transposase | - |
| KZO72_RS19375 (3984741) | 3984741..3986279 | + | 1539 | WP_072663459.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| KZO72_RS19380 (3986644) | 3986644..3987978 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| KZO72_RS19385 (3988058) | 3988058..3990205 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| KZO72_RS19390 (3990264) | 3990264..3991721 | + | 1458 | WP_219808326.1 | oligopeptide:H+ symporter | - |
| KZO72_RS19395 (3991958) | 3991958..3993475 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| KZO72_RS19400 (3993599) | 3993599..3993772 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| KZO72_RS19405 (3993800) | 3993800..3994096 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| KZO72_RS19410 (3994323) | 3994323..3994595 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| KZO72_RS19415 (3994607) | 3994607..3994837 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| KZO72_RS19420 (3995018) | 3995018..3996649 | + | 1632 | WP_001565376.1 | sensor histidine kinase | - |
| KZO72_RS19425 (3996646) | 3996646..3997365 | + | 720 | WP_219795029.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.002 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.002 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.002 |