MGE detailed information
MGE type: Genomic_island MGE length: 20932 bp
Accession: NZ_CP079992 Location: 4228732..4249663 Organism: Escherichia coli strain KMS2001 Replicon: chromosome
Accession: NZ_CP079992 Location: 4228732..4249663 Organism: Escherichia coli strain KMS2001 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KYK85_RS20440 (4224564) | 4224564..4225895 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| KYK85_RS20445 (4225917) | 4225917..4226906 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| KYK85_RS20450 (4227005) | 4227005..4227943 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| KYK85_RS20455 (4228258) | 4228258..4228476 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| KYK85_RS20460 (4228732) | 4228732..4229271 | + | 540 | WP_000675733.1 | protein YhaB | - |
| KYK85_RS20465 (4229293) | 4229293..4230480 | + | 1188 | WP_000484600.1 | YhaC family protein | - |
| KYK85_RS20475 (4231503) | 4231503..4232648 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| KYK85_RS20480 (4232745) | 4232745..4233635 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| KYK85_RS20485 (4233665) | 4233665..4234435 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| KYK85_RS20490 (4234451) | 4234451..4235785 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| KYK85_RS20495 (4236160) | 4236160..4237731 | + | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| KYK85_RS20500 (4237880) | 4237880..4238215 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| KYK85_RS20505 (4238215) | 4238215..4238679 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| KYK85_RS20510 (4238734) | 4238734..4239543 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| KYK85_RS20515 (4239792) | 4239792..4241072 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| KYK85_RS20520 (4241095) | 4241095..4241568 | + | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| KYK85_RS20525 (4241579) | 4241579..4241950 | + | 372 | Protein_4032 | PTS sugar transporter subunit IIC | - |
| KYK85_RS20530 (4241946) | 4241946..4242503 | + | 558 | Protein_4033 | amidohydrolase family protein | - |
| KYK85_RS20535 (4242854) | 4242854..4244008 | + | 1155 | WP_001114869.1 | AgaS family sugar isomerase | - |
| KYK85_RS20540 (4244021) | 4244021..4244881 | + | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| KYK85_RS20545 (4245048) | 4245048..4245524 | + | 477 | WP_000203711.1 | PTS galactosamine transporter subunit IIB | - |
| KYK85_RS20550 (4245563) | 4245563..4246366 | + | 804 | WP_000544489.1 | PTS galactosamine transporter subunit IIC | - |
| KYK85_RS20555 (4246356) | 4246356..4247147 | + | 792 | WP_000534347.1 | PTS galactosamine transporter subunit IID | - |
| KYK85_RS20560 (4247148) | 4247148..4247903 | + | 756 | WP_001311150.1 | galactosamine-6-phosphate isomerase | - |
| KYK85_RS20565 (4248304) | 4248304..4248888 | + | 585 | WP_001045432.1 | fimbrial protein | - |
| KYK85_RS20570 (4248968) | 4248968..4249663 | + | 696 | WP_000044775.1 | hypothetical protein | VF |
| KYK85_RS20575 (4249692) | 4249692..4252208 | + | 2517 | WP_001355538.1 | fimbria/pilus outer membrane usher protein | - |
| KYK85_RS20580 (4252219) | 4252219..4253310 | + | 1092 | WP_000816992.1 | fimbrial protein | - |
| KYK85_RS20585 (4253353) | 4253353..4254213 | - | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|