MGE detailed information
MGE type: Prophage MGE length: 24357 bp
Accession: NZ_CP079924 Location: 2226435..2250791 Organism: Escherichia sp. TC-EC600-tetX4 Replicon: chromosome
Accession: NZ_CP079924 Location: 2226435..2250791 Organism: Escherichia sp. TC-EC600-tetX4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KXD89_RS10680 (2221686) | 2221686..2222396 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| KXD89_RS10685 (2222399) | 2222399..2222959 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| KXD89_RS10690 (2222994) | 2222994..2223335 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| KXD89_RS10695 (2223470) | 2223470..2223796 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| KXD89_RS10700 (2224002) | 2224002..2225216 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| KXD89_RS10705 (2225228) | 2225228..2226247 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| KXD89_RS10710 (2226435) | 2226435..2227592 | - | 1158 | Protein_2093 | Tyrosine recombinase XerD ; Integrase | Integrase |
| KXD89_RS10715 (2227606) | 2227606..2228301 | - | 696 | Protein_2094 | IS3 family transposase IS2 | Transposase |
| KXD89_RS10720 (2228298) | 2228298..2229065 | - | 768 | Protein_2095 | exonuclease | - |
| KXD89_RS10725 (2229158) | 2229158..2229349 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| KXD89_RS10730 (2229346) | 2229346..2229534 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| KXD89_RS10735 (2230102) | 2230102..2230320 | - | 219 | WP_001171942.1 | protein YdfC | - |
| KXD89_RS22305 (2230350) | 2230350..2230478 | - | 129 | WP_000344964.1 | protein YdfB | - |
| KXD89_RS10740 (2230480) | 2230480..2230635 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| KXD89_RS10745 (2230802) | 2230802..2231209 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| KXD89_RS10750 (2231293) | 2231293..2231523 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| KXD89_RS10755 (2231507) | 2231507..2231785 | + | 279 | Protein_2103 | hypothetical protein | - |
| KXD89_RS10760 (2231820) | 2231820..2231969 | + | 150 | WP_011443592.1 | protein YdfW | - |
| KXD89_RS10765 (2232406) | 2232406..2232738 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| KXD89_RS10770 (2232941) | 2232941..2233246 | - | 306 | WP_001326990.1 | protein YdfV | - |
| KXD89_RS10775 (2233271) | 2233271..2233510 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| KXD89_RS10780 (2233510) | 2233510..2233797 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| KXD89_RS10785 (2233869) | 2233869..2234024 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| KXD89_RS10790 (2234241) | 2234241..2234492 | + | 252 | WP_000980994.1 | protein Rem | - |
| KXD89_RS10795 (2234559) | 2234559..2234837 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| KXD89_RS10800 (2234839) | 2234839..2235888 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| KXD89_RS10805 (2235902) | 2235902..2236654 | + | 753 | WP_001047135.1 | antitermination protein | - |
| KXD89_RS10810 (2236932) | 2236932..2237021 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| KXD89_RS10815 (2237076) | 2237076..2237288 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| KXD89_RS10820 (2237589) | 2237589..2237804 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| KXD89_RS10825 (2238168) | 2238168..2238338 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| KXD89_RS10830 (2238558) | 2238558..2238773 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| KXD89_RS10835 (2238778) | 2238778..2239089 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| KXD89_RS10840 (2239086) | 2239086..2239619 | + | 534 | WP_001092971.1 | lysozyme | - |
| KXD89_RS10845 (2239616) | 2239616..2240113 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| KXD89_RS10850 (2240476) | 2240476..2240688 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| KXD89_RS10855 (2240699) | 2240699..2240887 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| KXD89_RS10860 (2240890) | 2240890..2240955 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| KXD89_RS10865 (2241034) | 2241034..2241189 | + | 156 | WP_001309517.1 | protein YnfN | - |
| KXD89_RS10870 (2241361) | 2241361..2241534 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| KXD89_RS10875 (2241686) | 2241686..2242096 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| KXD89_RS10880 (2242154) | 2242154..2242387 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| KXD89_RS10885 (2242776) | 2242776..2243345 | + | 570 | WP_000453612.1 | DNA-packaging protein | - |
| KXD89_RS10890 (2243296) | 2243296..2244258 | + | 963 | WP_001027733.1 | phage tail protein | - |
| KXD89_RS10895 (2244258) | 2244258..2244833 | + | 576 | WP_001698950.1 | tail fiber assembly protein | - |
| KXD89_RS10900 (2244931) | 2244931..2245521 | - | 591 | WP_000078178.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| KXD89_RS10905 (2245838) | 2245838..2246071 | - | 234 | WP_000836770.1 | cold shock protein YdfK | - |
| KXD89_RS10910 (2246140) | 2246140..2246253 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| KXD89_RS10915 (2246774) | 2246774..2248141 | + | 1368 | Protein_2135 | MHS family MFS transporter | - |
| KXD89_RS10920 (2248230) | 2248230..2249690 | + | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| KXD89_RS10925 (2249725) | 2249725..2249928 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| KXD89_RS10930 (2250105) | 2250105..2250791 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| KXD89_RS10935 (2250880) | 2250880..2251626 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| KXD89_RS10940 (2251763) | 2251763..2253808 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| KXD89_RS10945 (2253852) | 2253852..2254370 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| KXD89_RS10950 (2254646) | 2254646..2255038 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|