MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 30790 bp
Accession: NZ_CP079894 Location: 1..30790 Organism: Escherichia fergusonii strain 5zf15-2-1 Replicon: plasmid p35ZF15-2-1
Accession: NZ_CP079894 Location: 1..30790 Organism: Escherichia fergusonii strain 5zf15-2-1 Replicon: plasmid p35ZF15-2-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KYD87_RS25280 (KYD87_25140) | 573..968 | + | 396 | WP_000733627.1 | cag pathogenicity island Cag12 family protein | - |
| KYD87_RS25285 | 971..1303 | + | 333 | WP_000699980.1 | hypothetical protein | - |
| KYD87_RS25290 (KYD87_25150) | 1386..1856 | + | 471 | WP_025755767.1 | thermonuclease family protein | - |
| KYD87_RS25295 (KYD87_25155) | 2271..2516 | + | 246 | WP_001243650.1 | hypothetical protein | - |
| KYD87_RS25300 (KYD87_25160) | 2536..4860 | + | 2325 | WP_025755768.1 | type IA DNA topoisomerase | - |
| KYD87_RS25305 (KYD87_25165) | 4872..5321 | + | 450 | WP_001282381.1 | H-NS family nucleoid-associated regulatory protein | - |
| KYD87_RS25310 (KYD87_25170) | 5384..5788 | + | 405 | WP_000059893.1 | hypothetical protein | - |
| KYD87_RS25315 (KYD87_25175) | 5983..6687 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| KYD87_RS25320 (KYD87_25180) | 6748..7566 | + | 819 | Protein_9 | Tn3 family transposase | - |
| KYD87_RS25325 (KYD87_25185) | 7665..8303 | - | 639 | WP_024245155.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| KYD87_RS25330 (KYD87_25190) | 8589..9209 | + | 621 | WP_000864791.1 | ParA family protein | - |
| KYD87_RS25335 (KYD87_25195) | 9261..9491 | + | 231 | WP_000051064.1 | plasmid partition protein ParG | - |
| KYD87_RS25340 (KYD87_25200) | 9507..9800 | + | 294 | WP_015060510.1 | hypothetical protein | - |
| KYD87_RS25345 (KYD87_25205) | 9802..10770 | + | 969 | WP_166501310.1 | IS5 family transposase IS903B | Transposase |
| KYD87_RS25350 (KYD87_25210) | 10830..11183 | - | 354 | WP_000876434.1 | DNA distortion polypeptide 3 | - |
| KYD87_RS25355 (KYD87_25215) | 11320..11766 | - | 447 | WP_001074386.1 | hypothetical protein | - |
| KYD87_RS25360 (KYD87_25220) | 11806..12642 | - | 837 | WP_001050931.1 | RepB family plasmid replication initiator protein | - |
| KYD87_RS25365 (KYD87_25225) | 13898..14149 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| KYD87_RS25370 (KYD87_25230) | 14139..14420 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KYD87_RS25375 (KYD87_25235) | 14566..14889 | + | 324 | WP_001181903.1 | hypothetical protein | - |
| KYD87_RS25380 (KYD87_25240) | 14934..15179 | + | 246 | WP_000356546.1 | hypothetical protein | - |
| KYD87_RS25385 (KYD87_25245) | 15169..15384 | + | 216 | WP_001180116.1 | hypothetical protein | - |
| KYD87_RS25390 (KYD87_25250) | 15477..15806 | + | 330 | WP_000866648.1 | hypothetical protein | - |
| KYD87_RS25395 (KYD87_25255) | 16093..16242 | + | 150 | WP_000003880.1 | hypothetical protein | - |
| KYD87_RS25400 (KYD87_25260) | 16255..16527 | + | 273 | WP_000160399.1 | hypothetical protein | - |
| KYD87_RS25405 (KYD87_25265) | 16854..17399 | + | 546 | WP_038976855.1 | DNA distortion polypeptide 1 | - |
| KYD87_RS25410 (KYD87_25270) | 17402..18559 | + | 1158 | WP_000538023.1 | DNA distortion polypeptide 2 | - |
| KYD87_RS25415 (KYD87_25275) | 18920..19411 | + | 492 | WP_000872475.1 | transcription termination/antitermination NusG family protein | - |
| KYD87_RS25420 (KYD87_25280) | 19636..20280 | + | 645 | WP_000953539.1 | Type IV secretion system protein virB1 | VF |
| KYD87_RS25425 (KYD87_25285) | 20264..20554 | + | 291 | WP_000921916.1 | TrbC/VirB2 family protein | - |
| KYD87_RS25430 (KYD87_25290) | 20578..23337 | + | 2760 | WP_000108725.1 | Type IV secretion system protein virB4 | VF |
| KYD87_RS25435 (KYD87_25295) | 23339..24076 | + | 738 | WP_000737859.1 | type IV secretion system protein | - |
| KYD87_RS25440 (KYD87_25300) | 24086..24346 | + | 261 | WP_001228869.1 | EexN family lipoprotein | - |
| KYD87_RS25445 (KYD87_25305) | 24358..25413 | + | 1056 | WP_000235774.1 | type IV secretion system protein | - |
| KYD87_RS25450 (KYD87_25310) | 25603..26325 | + | 723 | WP_000394570.1 | Type IV secretion system protein PtlE | VF |
| KYD87_RS25455 (KYD87_25315) | 26331..27260 | + | 930 | WP_025755764.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| KYD87_RS25460 (KYD87_25320) | 27257..28471 | + | 1215 | WP_025755765.1 | Type IV secretion system protein virB10 | VF |
| KYD87_RS25465 (KYD87_25325) | 28489..29526 | + | 1038 | WP_000217791.1 | Type IV secretion system protein PtlH | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|