MGE detailed information
MGE type: Prophage MGE length: 46490 bp
Accession: NZ_CP079884 Location: 2681319..2727808 Organism: Escherichia fergusonii strain 6S41-1 Replicon: chromosome
Accession: NZ_CP079884 Location: 2681319..2727808 Organism: Escherichia fergusonii strain 6S41-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KYC43_RS12975 () | 2677637..2679094 | + | 1458 | WP_046081854.1 | TrkH family potassium uptake protein | - |
| KYC43_RS12980 () | 2679203..2680054 | + | 852 | Protein_2540 | protein deglycase HchA | - |
| KYC43_RS12985 () | 2681319..2681900 | - | 582 | WP_223671491.1 | tail fiber assembly protein | - |
| KYC43_RS12990 () | 2681900..2685274 | - | 3375 | WP_223671493.1 | prophage tail fiber N-terminal domain-containing protein | - |
| KYC43_RS12995 () | 2685339..2685938 | - | 600 | WP_001233184.1 | hypothetical protein | VF |
| KYC43_RS13000 () | 2686006..2689494 | - | 3489 | WP_223671494.1 | host specificity protein J | - |
| KYC43_RS13005 () | 2689555..2690202 | - | 648 | WP_012311734.1 | tail assembly protein | - |
| KYC43_RS13010 () | 2690100..2690843 | - | 744 | WP_219394062.1 | C40 family peptidase | - |
| KYC43_RS13015 () | 2690848..2691546 | - | 699 | WP_001152456.1 | phage minor tail protein L | - |
| KYC43_RS13020 () | 2691546..2691902 | - | 357 | WP_040079256.1 | phage tail protein | - |
| KYC43_RS13025 () | 2691880..2695119 | - | 3240 | WP_223671495.1 | phage tail tape measure protein | - |
| KYC43_RS13030 () | 2695165..2695455 | - | 291 | WP_001211641.1 | DUF4035 domain-containing protein | - |
| KYC43_RS13035 () | 2695467..2695838 | - | 372 | WP_000164661.1 | phage tail assembly chaperone | - |
| KYC43_RS13040 () | 2695853..2696557 | - | 705 | WP_000097533.1 | hypothetical protein | - |
| KYC43_RS13045 () | 2696617..2696961 | - | 345 | WP_001209399.1 | DUF3168 domain-containing protein | - |
| KYC43_RS13050 () | 2696958..2697407 | - | 450 | WP_001312916.1 | HK97 gp10 family phage protein | - |
| KYC43_RS13055 () | 2697404..2697742 | - | 339 | WP_223671497.1 | phage head closure protein | - |
| KYC43_RS13060 () | 2697751..2698056 | - | 306 | WP_000983037.1 | head-tail connector protein | - |
| KYC43_RS13065 () | 2698068..2698256 | - | 189 | WP_000601355.1 | hypothetical protein | - |
| KYC43_RS13070 () | 2698308..2699513 | - | 1206 | Protein_2558 | phage major capsid protein | - |
| KYC43_RS13075 () | 2699528..2700178 | - | 651 | WP_001193631.1 | HK97 family phage prohead protease | - |
| KYC43_RS13080 () | 2700156..2701397 | - | 1242 | WP_000466247.1 | phage portal protein | - |
| KYC43_RS13085 () | 2701397..2701579 | - | 183 | WP_000478567.1 | hypothetical protein | - |
| KYC43_RS13090 () | 2701591..2703348 | - | 1758 | WP_001140902.1 | terminase large subunit | - |
| KYC43_RS13095 () | 2703348..2703830 | - | 483 | WP_001317918.1 | phage terminase small subunit P27 family | - |
| KYC43_RS13100 () | 2703979..2704329 | - | 351 | WP_001140099.1 | HNH endonuclease signature motif containing protein | - |
| KYC43_RS13105 () | 2704751..2704960 | + | 210 | WP_000200355.1 | hypothetical protein | - |
| KYC43_RS13110 () | 2705200..2705379 | - | 180 | WP_134267542.1 | hypothetical protein | - |
| KYC43_RS13115 () | 2705394..2705771 | - | 378 | WP_000014549.1 | M15 family metallopeptidase | - |
| KYC43_RS13120 () | 2705774..2706049 | - | 276 | WP_000950569.1 | phage holin family protein | - |
| KYC43_RS13125 () | 2706039..2706431 | - | 393 | WP_001384627.1 | putative holin | - |
| KYC43_RS13150 () | 2707593..2708282 | - | 690 | WP_001546004.1 | bacteriophage antitermination protein Q | - |
| KYC43_RS13155 () | 2708279..2708638 | - | 360 | WP_044502258.1 | RusA family crossover junction endodeoxyribonuclease | - |
| KYC43_RS13160 () | 2708651..2709700 | - | 1050 | WP_044502259.1 | DUF968 domain-containing protein | - |
| KYC43_RS13165 () | 2709702..2709980 | - | 279 | WP_001360223.1 | hypothetical protein | - |
| KYC43_RS13170 () | 2710047..2710310 | - | 264 | WP_000975572.1 | hypothetical protein | - |
| KYC43_RS13175 () | 2710528..2710683 | - | 156 | WP_000813255.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - | 2710695..2710753 | + | 59 | - | - | Antitoxin Detail |
| KYC43_RS13180 () | 2711588..2712178 | - | 591 | WP_039005580.1 | RloB family protein | - |
| KYC43_RS13185 () | 2712206..2713519 | - | 1314 | WP_039005582.1 | ATP-binding protein | - |
| KYC43_RS13190 () | 2714017..2714202 | - | 186 | Protein_2578 | hypothetical protein | - |
| KYC43_RS13195 () | 2714238..2714699 | - | 462 | WP_244469380.1 | replication protein P | - |
| KYC43_RS13200 () | 2714692..2715729 | - | 1038 | WP_039005584.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| KYC43_RS13205 () | 2715701..2716252 | - | 552 | WP_000705377.1 | toxin YdaT family protein | - |
| KYC43_RS13210 () | 2716236..2716463 | - | 228 | WP_000476986.1 | Cro/CI family transcriptional regulator | - |
| KYC43_RS13215 () | 2716541..2716948 | + | 408 | WP_001003379.1 | helix-turn-helix domain-containing protein | - |
| KYC43_RS13220 () | 2717199..2717498 | + | 300 | WP_044502262.1 | hypothetical protein | - |
| KYC43_RS13225 () | 2717570..2717788 | + | 219 | WP_223671499.1 | protein YdfC | - |
| KYC43_RS13230 () | 2717792..2717956 | - | 165 | WP_001296188.1 | hypothetical protein | - |
| KYC43_RS13235 () | 2718356..2718544 | + | 189 | WP_000854558.1 | cell division inhibition protein DicB | - |
| KYC43_RS13240 () | 2718541..2718732 | + | 192 | WP_001070255.1 | DUF1482 family protein | - |
| KYC43_RS13245 () | 2719042..2720022 | - | 981 | WP_000019440.1 | IS5 family transposase ISKpn26 | Transposase |
| KYC43_RS13250 () | 2720166..2720531 | + | 366 | Protein_2590 | exonuclease | - |
| KYC43_RS13255 () | 2721942..2722466 | + | 525 | WP_151317763.1 | 3'-5' exonuclease | - |
| KYC43_RS13260 () | 2722525..2722728 | + | 204 | WP_000096344.1 | DUF4224 domain-containing protein | - |
| KYC43_RS13265 () | 2722728..2723778 | + | 1051 | Protein_2593 | Tyrosine recombinase XerC ; Integrase | Integrase |
| KYC43_RS13275 () | 2723989..2724786 | + | 798 | WP_182212316.1 | DgsA anti-repressor MtfA | - |
| KYC43_RS13285 () | 2725001..2725951 | - | 951 | WP_001010985.1 | HTH-type transcriptional regulator Cbl | - |
| KYC43_RS13290 () | 2726053..2726970 | - | 918 | WP_001011449.1 | nitrogen assimilation transcriptional regulator NAC | - |
| KYC43_RS13300 () | 2727539..2727736 | + | 198 | Protein_2597 | Arm DNA-binding domain-containing protein | - |
| KYC43_RS13305 () | 2728395..2728784 | - | 390 | WP_182212317.1 | hypothetical protein | - |
| KYC43_RS13310 () | 2728796..2729236 | - | 441 | WP_182212318.1 | hypothetical protein | - |
| KYC43_RS13315 () | 2729666..2730037 | - | 372 | WP_182212319.1 | hypothetical protein | - |
| KYC43_RS13320 () | 2730042..2730494 | - | 453 | WP_223671501.1 | lysozyme inhibitor LprI family protein | - |
| KYC43_RS13325 () | 2730494..2731165 | - | 672 | WP_223671503.1 | hypothetical protein | - |
| KYC43_RS13330 () | 2731410..2731889 | - | 480 | WP_001284965.1 | Hcp family type VI secretion system effector | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|