MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 134412 bp
Accession: NZ_CP079870 Location: 1..134412 Organism: Mycobacterium sp. SMC-4 Replicon: plasmid pSMC-4_1
Accession: NZ_CP079870 Location: 1..134412 Organism: Mycobacterium sp. SMC-4 Replicon: plasmid pSMC-4_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KXD98_RS26710 (KXD98_26570) | 5367..5945 | - | 579 | WP_260758390.1 | hypothetical protein | - |
| KXD98_RS26715 (KXD98_26575) | 6031..6783 | - | 753 | WP_260758510.1 | hypothetical protein | - |
| KXD98_RS26720 (KXD98_26580) | 7095..7616 | - | 522 | WP_260758391.1 | hypothetical protein | - |
| KXD98_RS26725 (KXD98_26585) | 7609..8325 | - | 717 | WP_046361761.1 | ParA family protein | - |
| KXD98_RS26730 (KXD98_26590) | 9747..9974 | + | 228 | WP_260758393.1 | ribbon-helix-helix protein, CopG family | Antitoxin Detail |
| KXD98_RS26735 (KXD98_26595) | 9971..10273 | + | 303 | WP_260758395.1 | toxin | Toxin Detail |
| KXD98_RS26740 (KXD98_26600) | 10389..12395 | - | 2007 | WP_260758397.1 | hypothetical protein | - |
| KXD98_RS26745 (KXD98_26605) | 12726..13013 | - | 288 | WP_260758398.1 | toxin-antitoxin system | - |
| KXD98_RS26750 (KXD98_26610) | 13154..13480 | + | 327 | WP_260758400.1 | type VII secretion target | - |
| KXD98_RS26755 (KXD98_26615) | 13547..15283 | + | 1737 | WP_260758401.1 | PPE domain-containing protein | - |
| KXD98_RS26760 (KXD98_26620) | 15258..15650 | + | 393 | WP_260758402.1 | hypothetical protein | - |
| KXD98_RS26765 (KXD98_26625) | 15656..16021 | + | 366 | WP_260765541.1 | hypothetical protein | - |
| KXD98_RS26770 (KXD98_26630) | 16848..19193 | + | 2346 | WP_260765542.1 | hypothetical protein | - |
| KXD98_RS26775 (KXD98_26635) | 19431..19724 | + | 294 | WP_046366374.1 | hypothetical protein | - |
| KXD98_RS26780 (KXD98_26640) | 20100..21215 | + | 1116 | WP_260765543.1 | hypothetical protein | - |
| KXD98_RS26785 (KXD98_26645) | 21219..22394 | + | 1176 | WP_260765544.1 | transglycosylase SLT domain-containing protein | - |
| KXD98_RS26790 (KXD98_26650) | 22394..23482 | + | 1089 | WP_260765545.1 | hypothetical protein | - |
| KXD98_RS26795 (KXD98_26655) | 23485..25023 | + | 1539 | WP_260765546.1 | ESX-5 secretion system ATPase EccB5 | VF |
| KXD98_RS26800 (KXD98_26660) | 25029..26216 | + | 1188 | WP_260765547.1 | ESX-5 secretion system protein EccC5 | VF |
| KXD98_RS26805 (KXD98_26665) | 26216..29218 | + | 3003 | WP_260758411.1 | ESX secretion system protein EccC | VF |
| KXD98_RS26810 (KXD98_26670) | 29397..29702 | + | 306 | WP_260758412.1 | PE domain-containing protein | - |
| KXD98_RS26815 (KXD98_26675) | 29734..30945 | + | 1212 | WP_260758413.1 | putative PPE family protein PPE51 | VF |
| KXD98_RS26820 (KXD98_26680) | 31036..31341 | + | 306 | WP_260758414.1 | hypothetical protein | - |
| KXD98_RS26825 (KXD98_26685) | 31385..31672 | + | 288 | WP_260758415.1 | hypothetical protein | - |
| KXD98_RS26830 (KXD98_26690) | 31857..32663 | + | 807 | WP_260765548.1 | ESX secretion-associated protein EspG | - |
| KXD98_RS26835 (KXD98_26695) | 33708..34679 | + | 972 | WP_260765565.1 | MinD/ParA family protein | - |
| KXD98_RS26840 (KXD98_26700) | 34676..36217 | + | 1542 | WP_260765549.1 | ESX-5 secretion system protein EccD5 | VF |
| KXD98_RS26845 (KXD98_26705) | 36217..37611 | + | 1395 | WP_260765550.1 | Mycosin-3 | VF |
| KXD98_RS26850 (KXD98_26710) | 37695..39266 | + | 1572 | WP_260765551.1 | ESX-5 secretion system protein EccE5 | VF |
| KXD98_RS26855 (KXD98_26715) | 39263..41047 | + | 1785 | WP_260765552.1 | ESX-5 secretion system protein EccA5 | VF |
| KXD98_RS26860 (KXD98_26720) | 41126..41539 | + | 414 | WP_260765553.1 | type IV secretion system protein VirD4 | - |
| KXD98_RS26865 (KXD98_26725) | 41558..42976 | + | 1419 | WP_260765554.1 | type IV secretory system conjugative DNA transfer family protein | - |
| KXD98_RS26870 (KXD98_26730) | 43322..43489 | + | 168 | WP_260765555.1 | hypothetical protein | - |
| KXD98_RS26875 (KXD98_26735) | 43505..44320 | - | 816 | WP_260758432.1 | hypothetical protein | - |
| KXD98_RS26880 (KXD98_26740) | 44359..44733 | + | 375 | WP_260758433.1 | hypothetical protein | - |
| KXD98_RS26885 (KXD98_26745) | 44733..45815 | + | 1083 | WP_260758436.1 | hypothetical protein | - |
| KXD98_RS26890 (KXD98_26750) | 45834..46781 | + | 948 | WP_260758437.1 | conjugal transfer protein | - |
| KXD98_RS26895 (KXD98_26755) | 46829..47101 | + | 273 | WP_260758438.1 | hypothetical protein | - |
| KXD98_RS26900 (KXD98_26760) | 47172..50003 | + | 2832 | WP_260765557.1 | ATP-binding protein | - |
| KXD98_RS26905 (KXD98_26765) | 50087..52123 | + | 2037 | WP_260765558.1 | hypothetical protein | - |
| KXD98_RS26910 (KXD98_26770) | 52120..52818 | + | 699 | WP_260765559.1 | hypothetical protein | - |
| KXD98_RS26915 (KXD98_26775) | 52815..53636 | + | 822 | WP_260765560.1 | hypothetical protein | - |
| KXD98_RS26920 (KXD98_26780) | 53623..54399 | + | 777 | WP_260758446.1 | hypothetical protein | - |
| KXD98_RS26925 (KXD98_26785) | 54849..55232 | + | 384 | WP_260758448.1 | hypothetical protein | - |
| KXD98_RS26930 (KXD98_26790) | 55229..55567 | + | 339 | WP_260758450.1 | hypothetical protein | - |
| KXD98_RS26935 (KXD98_26795) | 55578..55829 | + | 252 | WP_260758452.1 | glutaredoxin-like protein NrdH | - |
| KXD98_RS26940 (KXD98_26800) | 56104..57309 | + | 1206 | WP_260758453.1 | DUF1173 domain-containing protein | - |
| KXD98_RS26945 (KXD98_26805) | 57306..58133 | + | 828 | Protein_48 | DNA adenine methylase | - |
| KXD98_RS26950 (KXD98_26810) | 58379..58786 | + | 408 | WP_260765561.1 | DUF2510 domain-containing protein | - |
| KXD98_RS26955 (KXD98_26815) | 58840..64698 | - | 5859 | WP_260758456.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| KXD98_RS26960 (KXD98_26820) | 64936..65505 | + | 570 | WP_051226815.1 | hypothetical protein | - |
| KXD98_RS26965 (KXD98_26825) | 65517..66065 | + | 549 | WP_081660076.1 | hypothetical protein | - |
| KXD98_RS26970 (KXD98_26830) | 66215..66487 | - | 273 | WP_024447880.1 | hypothetical protein | - |
| KXD98_RS26975 (KXD98_26835) | 66517..67302 | - | 786 | WP_024447879.1 | hypothetical protein | - |
| KXD98_RS26980 (KXD98_26840) | 67389..68177 | - | 789 | WP_260765520.1 | hypothetical protein | - |
| KXD98_RS26985 (KXD98_26845) | 68134..68595 | + | 462 | WP_024447877.1 | hypothetical protein | - |
| KXD98_RS26990 (KXD98_26850) | 68604..69554 | + | 951 | WP_024447876.1 | acetaldehyde dehydrogenase (acetylating) | - |
| KXD98_RS26995 (KXD98_26855) | 69551..70555 | + | 1005 | WP_036425511.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| KXD98_RS27000 (KXD98_26860) | 70666..72204 | + | 1539 | WP_024447875.1 | APC family permease | - |
| KXD98_RS27005 (KXD98_26865) | 72298..72864 | + | 567 | WP_024447874.1 | TetR family transcriptional regulator | - |
| KXD98_RS27010 (KXD98_26870) | 72895..74313 | + | 1419 | WP_051226817.1 | aminobutyraldehyde dehydrogenase | - |
| KXD98_RS27015 (KXD98_26875) | 74300..74743 | + | 444 | WP_260765567.1 | hypothetical protein | - |
| KXD98_RS27020 (KXD98_26880) | 74740..75945 | + | 1206 | WP_029372483.1 | cytochrome P450 | - |
| KXD98_RS27025 (KXD98_26885) | 75942..76133 | + | 192 | WP_024447868.1 | (4Fe-4S)-binding protein | - |
| KXD98_RS27030 (KXD98_26890) | 76214..76495 | - | 282 | Protein_65 | hypothetical protein | - |
| KXD98_RS27035 (KXD98_26895) | 76662..77084 | - | 423 | WP_137148693.1 | transposase | - |
| KXD98_RS27040 (KXD98_26900) | 77081..79315 | - | 2235 | WP_260760791.1 | tyrosine-type recombinase/integrase | - |
| KXD98_RS27045 (KXD98_26905) | 79299..80510 | - | 1212 | WP_137148695.1 | tyrosine-type recombinase/integrase | - |
| KXD98_RS27050 (KXD98_26910) | 80537..81781 | - | 1245 | WP_137148696.1 | ImmA/IrrE family metallo-endopeptidase | - |
| KXD98_RS27055 (KXD98_26915) | 81831..82568 | - | 738 | WP_137148697.1 | hypothetical protein | - |
| KXD98_RS27060 (KXD98_26920) | 83103..83486 | + | 384 | WP_137148698.1 | hypothetical protein | - |
| KXD98_RS27065 (KXD98_26925) | 83708..84562 | - | 855 | Protein_72 | IS21 family transposase ISSme2 | Transposase |
| KXD98_RS27070 (KXD98_26930) | 84559..85920 | - | 1362 | WP_260760790.1 | IS21 family transposase | - |
| KXD98_RS27075 (KXD98_26935) | 86227..86508 | - | 282 | WP_074362286.1 | hypothetical protein | - |
| KXD98_RS27080 (KXD98_26940) | 86541..86924 | - | 384 | WP_137148699.1 | heme-binding protein | - |
| KXD98_RS27085 (KXD98_26945) | 86957..89332 | - | 2376 | WP_137148700.1 | arylsulfatase | - |
| KXD98_RS27090 (KXD98_26950) | 89467..89940 | - | 474 | WP_260760789.1 | hypothetical protein | - |
| KXD98_RS27095 (KXD98_26955) | 90056..91504 | - | 1449 | WP_137148702.1 | DUF1254 domain-containing protein | - |
| KXD98_RS27100 (KXD98_26960) | 91661..92692 | + | 1032 | WP_260760788.1 | HTH-type transcriptional regulator VirS | VF |
| KXD98_RS27105 (KXD98_26965) | 92710..93720 | - | 1011 | WP_260760787.1 | GGDEF domain-containing protein | - |
| KXD98_RS27110 (KXD98_26970) | 94222..94476 | - | 255 | WP_260765522.1 | hypothetical protein | VF |
| KXD98_RS27115 (KXD98_26975) | 94473..94679 | - | 207 | WP_260758477.1 | hypothetical protein | - |
| KXD98_RS27120 (KXD98_26980) | 95127..96143 | + | 1017 | WP_260765523.1 | hypothetical protein | - |
| KXD98_RS27125 (KXD98_26985) | 96776..99064 | + | 2289 | WP_260765566.1 | N-6 DNA methylase | - |
| KXD98_RS27130 (KXD98_26990) | 99099..99359 | - | 261 | WP_260765524.1 | hypothetical protein | - |
| KXD98_RS27135 (KXD98_26995) | 99389..101491 | - | 2103 | WP_260765525.1 | IS607 family transposase ISCbt3 | Transposase |
| KXD98_RS27140 (KXD98_27000) | 101523..101924 | - | 402 | WP_260765526.1 | transposase | - |
| KXD98_RS27145 (KXD98_27005) | 101921..104149 | - | 2229 | WP_260765527.1 | tyrosine-type recombinase/integrase | - |
| KXD98_RS27150 (KXD98_27010) | 104133..105338 | - | 1206 | WP_260765528.1 | site-specific integrase | - |
| KXD98_RS27155 (KXD98_27015) | 105361..106365 | - | 1005 | WP_260765529.1 | ImmA/IrrE family metallo-endopeptidase | - |
| KXD98_RS27160 (KXD98_27020) | 106682..107437 | - | 756 | WP_260765530.1 | hypothetical protein | - |
| KXD98_RS27165 (KXD98_27025) | 107918..108343 | - | 426 | WP_260758480.1 | hypothetical protein | - |
| KXD98_RS27170 (KXD98_27030) | 108375..108716 | - | 342 | WP_260758481.1 | helix-turn-helix transcriptional regulator | - |
| KXD98_RS27175 (KXD98_27035) | 108824..109408 | - | 585 | WP_260758483.1 | hypothetical protein | - |
| KXD98_RS27180 (KXD98_27040) | 109523..110152 | - | 630 | WP_260765531.1 | thermonuclease family protein | - |
| KXD98_RS27185 (KXD98_27045) | 110205..110558 | - | 354 | WP_260758486.1 | hypothetical protein | - |
| KXD98_RS27190 (KXD98_27050) | 110922..111113 | + | 192 | WP_260765532.1 | hypothetical protein | - |
| KXD98_RS27195 (KXD98_27055) | 111131..111934 | - | 804 | WP_260758488.1 | hypothetical protein | - |
| KXD98_RS27200 (KXD98_27060) | 111931..113697 | - | 1767 | WP_260758490.1 | hypothetical protein | - |
| KXD98_RS27205 (KXD98_27065) | 113979..114368 | - | 390 | WP_260758491.1 | hypothetical protein | - |
| KXD98_RS27210 (KXD98_27070) | 114448..115134 | - | 687 | WP_260765533.1 | Fic family protein | - |
| KXD98_RS27215 (KXD98_27075) | 115201..115398 | + | 198 | WP_260758495.1 | DUF1778 domain-containing protein | - |
| KXD98_RS27220 (KXD98_27080) | 115454..115720 | - | 267 | WP_260758497.1 | hypothetical protein | - |
| KXD98_RS27225 (KXD98_27085) | 115761..116996 | - | 1236 | WP_260765534.1 | hypothetical protein | - |
| KXD98_RS27230 (KXD98_27090) | 117292..117693 | - | 402 | WP_260758500.1 | Nucleoid-associated protein EspR | VF |
| KXD98_RS27235 (KXD98_27095) | 117765..118352 | - | 588 | WP_260765535.1 | hypothetical protein | - |
| KXD98_RS27240 (KXD98_27100) | 118482..119357 | - | 876 | WP_260758503.1 | hypothetical protein | - |
| KXD98_RS27245 (KXD98_27105) | 119584..119913 | - | 330 | WP_260758505.1 | hypothetical protein | - |
| KXD98_RS27250 (KXD98_27110) | 120085..120477 | - | 393 | WP_260765536.1 | type II toxin-antitoxin system VapC family toxin | - |
| KXD98_RS27255 (KXD98_27115) | 120474..120719 | - | 246 | WP_260758361.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| KXD98_RS27260 (KXD98_27120) | 121015..121491 | + | 477 | WP_157835606.1 | GNAT family N-acetyltransferase | - |
| KXD98_RS27265 (KXD98_27125) | 121667..122140 | + | 474 | WP_016895292.1 | GNAT family N-acetyltransferase | - |
| KXD98_RS27270 (KXD98_27130) | 122140..122802 | + | 663 | WP_043988409.1 | uridine kinase | - |
| KXD98_RS27275 (KXD98_27135) | 123006..124325 | - | 1320 | WP_064961518.1 | IS256 family transposase IS6120 | Transposase |
| KXD98_RS27280 (KXD98_27140) | 124534..125703 | + | 1170 | WP_232004316.1 | MFS transporter | - |
| KXD98_RS27285 (KXD98_27150) | 126335..127669 | - | 1335 | Protein_116 | hypothetical protein | - |
| KXD98_RS27290 (KXD98_27155) | 127812..128165 | - | 354 | WP_043988411.1 | helix-turn-helix transcriptional regulator | - |
| KXD98_RS27295 (KXD98_27160) | 128162..129265 | - | 1104 | WP_232004317.1 | site-specific integrase | - |
| KXD98_RS27300 | 129883..130089 | + | 207 | WP_260758507.1 | DUF2191 domain-containing protein | - |
| KXD98_RS27305 (KXD98_27165) | 130080..130502 | + | 423 | WP_260758362.1 | PIN domain nuclease | - |
| KXD98_RS27310 (KXD98_27170) | 130525..131229 | + | 705 | WP_260765537.1 | hypothetical protein | - |
| KXD98_RS27315 (KXD98_27175) | 131403..132209 | + | 807 | WP_260765538.1 | hypothetical protein | - |
| KXD98_RS27320 (KXD98_27180) | 132209..132895 | + | 687 | WP_260765539.1 | hypothetical protein | - |
| KXD98_RS27325 (KXD98_27185) | 132975..133343 | - | 369 | WP_260765540.1 | hypothetical protein | - |
| KXD98_RS27330 (KXD98_27190) | 133340..134077 | - | 738 | WP_260758387.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|