MGE detailed information
MGE type: Prophage MGE length: 21039 bp
Accession: NZ_CP079839 Location: 4145026..4166064 Organism: Salmonella enterica strain LHICA_E3 Replicon: chromosome
Accession: NZ_CP079839 Location: 4145026..4166064 Organism: Salmonella enterica strain LHICA_E3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMJ87_RS20020 () | 4140463..4141836 | + | 1374 | WP_219165069.1 | MFS transporter | - |
| JMJ87_RS20025 () | 4141884..4142764 | - | 881 | Protein_3914 | protease HtpX | - |
| JMJ87_RS20030 () | 4142958..4145006 | - | 2049 | WP_001091238.1 | carboxy terminal-processing peptidase | - |
| JMJ87_RS20035 () | 4145026..4145712 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| JMJ87_RS20040 () | 4145810..4146307 | - | 498 | WP_001804555.1 | GAF domain-containing protein | - |
| JMJ87_RS20045 () | 4146436..4147719 | + | 1284 | WP_023178676.1 | membrane integrity lipid transport subunit YebS | - |
| JMJ87_RS20050 () | 4147688..4150321 | + | 2634 | WP_023178678.1 | hypothetical protein | VF |
| JMJ87_RS20055 () | 4150399..4151838 | + | 1440 | WP_079974842.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| JMJ87_RS20060 () | 4151956..4152192 | + | 237 | WP_024131167.1 | YebV family protein | - |
| JMJ87_RS20065 () | 4152303..4152494 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| JMJ87_RS20070 () | 4152513..4153163 | - | 651 | WP_079797195.1 | protein-serine/threonine phosphatase | - |
| JMJ87_RS20075 () | 4153385..4153549 | - | 165 | WP_079797194.1 | hypothetical protein | - |
| JMJ87_RS20080 () | 4153832..4154554 | - | 723 | WP_079797193.1 | Guanine nucleotide exchange factor sopE2 | VF |
| JMJ87_RS20085 () | 4155239..4155634 | + | 396 | WP_046093210.1 | DUF1398 family protein | - |
| JMJ87_RS20090 () | 4155961..4156446 | + | 486 | WP_046093209.1 | hypothetical protein | - |
| JMJ87_RS24930 () | 4157048..4157821 | + | 774 | WP_257589999.1 | E3 ubiquitin-protein ligase SopA | VF |
| JMJ87_RS24935 () | 4158070..4159062 | + | 993 | WP_257589998.1 | DUF4116 domain-containing protein | - |
| JMJ87_RS20100 () | 4159404..4159583 | + | 180 | WP_001168919.1 | hypothetical protein | - |
| JMJ87_RS20105 () | 4159777..4160118 | + | 342 | Protein_3931 | hypothetical protein ; Integrase | Integrase |
| - | 4160256..4160399 | + | 144 | - | - | Antitoxin Detail |
| - | 4160258..4160361 | - | 104 | - | - | Toxin Detail |
| JMJ87_RS20110 () | 4160505..4160855 | - | 351 | WP_079974728.1 | YebY family protein | - |
| JMJ87_RS20115 () | 4160873..4161748 | - | 876 | WP_000979698.1 | copper homeostasis membrane protein CopD | - |
| JMJ87_RS20120 () | 4161749..4162123 | - | 375 | WP_001664129.1 | CopC domain-containing protein YobA | - |
| JMJ87_RS20125 () | 4162261..4162491 | + | 231 | WP_000856223.1 | DNA polymerase III subunit theta | - |
| JMJ87_RS20130 () | 4162599..4163255 | + | 657 | WP_000100253.1 | carbon-nitrogen hydrolase family protein | - |
| JMJ87_RS20135 () | 4163279..4163977 | + | 699 | WP_000944281.1 | exodeoxyribonuclease X | - |
| JMJ87_RS20140 () | 4164013..4166064 | - | 2052 | WP_023178691.1 | oligopeptidase B | - |
| JMJ87_RS20145 () | 4166276..4166935 | - | 660 | WP_023178693.1 | tellurite resistance TerB family protein | - |
| JMJ87_RS20150 () | 4167026..4167382 | - | 357 | WP_001042124.1 | protein YebF | - |
| JMJ87_RS20155 () | 4167455..4167745 | - | 291 | WP_000257726.1 | DNA damage-inducible protein YebG | - |
| JMJ87_RS20160 () | 4167876..4169054 | + | 1179 | WP_000173443.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| JMJ87_RS20165 () | 4169126..4169767 | - | 642 | WP_000800500.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|