MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 41998 bp
Accession: NZ_CP079839 Location: 2030152..2072149 Organism: Salmonella enterica strain LHICA_E3 Replicon: chromosome
Accession: NZ_CP079839 Location: 2030152..2072149 Organism: Salmonella enterica strain LHICA_E3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMJ87_RS09745 (2026287) | 2026287..2027051 | - | 765 | WP_000998688.1 | gluconate 5-dehydrogenase | - |
| JMJ87_RS09750 (2027076) | 2027076..2028107 | - | 1032 | WP_079974588.1 | L-idonate 5-dehydrogenase | - |
| JMJ87_RS09755 (2028324) | 2028324..2028854 | + | 531 | WP_000896758.1 | gluconokinase | - |
| JMJ87_RS09760 (2028882) | 2028882..2029901 | - | 1020 | WP_023180041.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| JMJ87_RS09770 (2030358) | 2030358..2031284 | - | 927 | WP_079797055.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| JMJ87_RS09775 (2031274) | 2031274..2032893 | - | 1620 | WP_079974586.1 | MobH family relaxase | - |
| JMJ87_RS09780 (2033072) | 2033072..2033983 | - | 912 | WP_079797053.1 | zincin-like metallopeptidase domain-containing protein | - |
| JMJ87_RS09785 (2034069) | 2034069..2034362 | - | 294 | WP_079955206.1 | hypothetical protein | - |
| JMJ87_RS09795 (2036527) | 2036527..2038494 | - | 1968 | WP_079797966.1 | hypothetical protein | - |
| JMJ87_RS09800 (2038573) | 2038573..2041226 | - | 2654 | Protein_1898 | conjugative transfer ATPase | - |
| JMJ87_RS09805 (2041226) | 2041226..2041615 | - | 390 | WP_079797964.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| JMJ87_RS09810 (2041615) | 2041615..2042952 | - | 1338 | Protein_1900 | TIGR03752 family integrating conjugative element protein | - |
| JMJ87_RS09815 (2042949) | 2042949..2043731 | - | 783 | WP_079974454.1 | TIGR03749 family integrating conjugative element protein | - |
| JMJ87_RS09820 (2043728) | 2043728..2044354 | - | 627 | WP_079797962.1 | TIGR03746 family integrating conjugative element protein | - |
| JMJ87_RS09825 (2044351) | 2044351..2044704 | - | 354 | WP_079797961.1 | TIGR03750 family conjugal transfer protein | - |
| JMJ87_RS09830 (2044708) | 2044708..2045034 | - | 327 | WP_023247603.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| JMJ87_RS09835 (2045053) | 2045053..2045286 | - | 234 | WP_023247602.1 | TIGR03758 family integrating conjugative element protein | - |
| JMJ87_RS09840 (2045283) | 2045283..2045594 | - | 312 | WP_079955214.1 | RAQPRD family integrative conjugative element protein | - |
| JMJ87_RS09845 (2045988) | 2045988..2046785 | - | 798 | WP_079797959.1 | FRG domain-containing protein | - |
| JMJ87_RS09850 (2046795) | 2046795..2047478 | - | 684 | WP_079797958.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| JMJ87_RS09855 (2047478) | 2047478..2047744 | - | 267 | WP_079797957.1 | hypothetical protein | - |
| JMJ87_RS09860 (2047707) | 2047707..2049740 | - | 2034 | WP_079974453.1 | type IV conjugative transfer system coupling protein TraD | - |
| JMJ87_RS09865 (2049737) | 2049737..2050144 | - | 408 | WP_079797955.1 | integrating conjugative element protein | - |
| JMJ87_RS09870 (2050141) | 2050141..2050674 | - | 534 | WP_079797954.1 | hypothetical protein | VF |
| JMJ87_RS09875 (2050650) | 2050650..2051300 | - | 651 | WP_079797953.1 | TIGR03759 family integrating conjugative element protein | - |
| JMJ87_RS09880 (2051307) | 2051307..2051915 | - | 609 | WP_079974452.1 | hypothetical protein | - |
| JMJ87_RS09885 (2051908) | 2051908..2052372 | - | 465 | WP_079974451.1 | hypothetical protein | VF |
| JMJ87_RS09890 (2052493) | 2052493..2052909 | - | 417 | WP_079797950.1 | STY4534 family ICE replication protein | - |
| JMJ87_RS24795 (2053284) | 2053284..2053439 | + | 156 | WP_249264789.1 | hypothetical protein | - |
| JMJ87_RS09900 (2053482) | 2053482..2053976 | - | 495 | WP_079974450.1 | DUF3158 family protein | - |
| JMJ87_RS09905 (2053966) | 2053966..2054664 | - | 699 | WP_079797947.1 | TIGR03761 family integrating conjugative element protein | - |
| JMJ87_RS09910 (2054906) | 2054906..2056204 | - | 1299 | WP_079797946.1 | Adenosine monophosphate-protein transferase SoFic | VF |
| JMJ87_RS09915 (2056581) | 2056581..2057147 | - | 567 | WP_079797945.1 | alpha/beta hydrolase | - |
| JMJ87_RS09920 (2057392) | 2057392..2059704 | - | 2313 | WP_079974449.1 | putative autotransporter | VF |
| JMJ87_RS09925 (2059983) | 2059983..2061086 | - | 1104 | WP_079974448.1 | reverse transcriptase family protein | - |
| JMJ87_RS09930 (2061259) | 2061259..2063379 | - | 2121 | WP_219165308.1 | retron Eco8 family effector endonuclease | - |
| JMJ87_RS09935 (2063769) | 2063769..2063924 | - | 156 | WP_176580895.1 | hypothetical protein | - |
| JMJ87_RS09940 (2064461) | 2064461..2064766 | + | 306 | WP_001314389.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| JMJ87_RS09945 (2064771) | 2064771..2066099 | + | 1329 | WP_079797941.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| JMJ87_RS09950 (2066257) | 2066257..2066526 | - | 270 | WP_249264787.1 | hypothetical protein | - |
| JMJ87_RS09955 (2066495) | 2066495..2067391 | - | 897 | WP_219165310.1 | STY4528 family pathogenicity island replication protein | - |
| JMJ87_RS09960 (2067410) | 2067410..2067949 | - | 540 | WP_000938043.1 | DUF2857 domain-containing protein | - |
| JMJ87_RS09965 (2067933) | 2067933..2069417 | - | 1485 | WP_079797940.1 | chromosome partitioning protein ParB | - |
| JMJ87_RS09970 (2069414) | 2069414..2070769 | - | 1356 | WP_079797939.1 | replicative DNA helicase | - |
| JMJ87_RS09975 (2070762) | 2070762..2071136 | - | 375 | WP_003830125.1 | hypothetical protein | - |
| JMJ87_RS09980 (2071133) | 2071133..2072017 | - | 885 | WP_079974446.1 | ParA family protein | - |
| JMJ87_RS09990 (2072373) | 2072373..2073248 | + | 876 | WP_079974445.1 | HNH endonuclease | - |
| JMJ87_RS09995 (2073605) | 2073605..2074321 | - | 717 | WP_000532939.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| JMJ87_RS10000 (2074733) | 2074733..2076364 | - | 1632 | WP_079974444.1 | class I SAM-dependent methyltransferase | - |
| JMJ87_RS10005 (2076369) | 2076369..2076626 | - | 258 | WP_001054380.1 | YjhX family toxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|