MGE detailed information
MGE type: Prophage MGE length: 57668 bp
Accession: NZ_CP079772 Location: 1136190..1193857 Organism: Escherichia coli strain GS04 Replicon: chromosome
Accession: NZ_CP079772 Location: 1136190..1193857 Organism: Escherichia coli strain GS04 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KYX57_RS05595 (1131492) | 1131492..1132058 | + | 567 | WP_259482657.1 | hypothetical protein | - |
| KYX57_RS05600 (1132060) | 1132060..1132278 | + | 219 | WP_024184170.1 | hypothetical protein | - |
| KYX57_RS05605 (1132484) | 1132484..1132975 | + | 492 | WP_259482658.1 | hypothetical protein | - |
| KYX57_RS05610 (1133048) | 1133048..1134037 | + | 990 | WP_024262807.1 | hypothetical protein | - |
| KYX57_RS05615 (1134579) | 1134579..1135991 | - | 1413 | Protein_1099 | molybdopterin-dependent oxidoreductase | - |
| KYX57_RS05620 (1136190) | 1136190..1136495 | - | 306 | WP_259483011.1 | DUF1161 domain-containing protein | - |
| KYX57_RS05625 (1136603) | 1136603..1137283 | + | 681 | WP_072131602.1 | YnfC family lipoprotein | - |
| KYX57_RS05630 (1137316) | 1137316..1137876 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| KYX57_RS05635 (1137911) | 1137911..1138252 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| KYX57_RS05640 (1138387) | 1138387..1138713 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| KYX57_RS05645 (1138919) | 1138919..1140133 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| KYX57_RS05650 (1140145) | 1140145..1141164 | + | 1020 | WP_023281252.1 | Zn-dependent oxidoreductase | - |
| KYX57_RS05655 (1141352) | 1141352..1142632 | - | 1281 | WP_000876979.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| KYX57_RS05660 (1142667) | 1142667..1142918 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| KYX57_RS05665 (1142991) | 1142991..1145462 | - | 2472 | WP_001515375.1 | exonuclease | - |
| KYX57_RS05670 (1145556) | 1145556..1145747 | - | 192 | WP_134240691.1 | lysis protein YdfD | - |
| KYX57_RS05675 (1145744) | 1145744..1145932 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| KYX57_RS05680 (1146500) | 1146500..1146718 | - | 219 | WP_001171952.1 | protein YdfC | - |
| KYX57_RS05685 (1146748) | 1146748..1146876 | - | 129 | WP_000344930.1 | protein YdfB | - |
| KYX57_RS05690 (1146878) | 1146878..1147033 | - | 156 | WP_000379588.1 | DUF1391 family protein | - |
| KYX57_RS05695 (1147202) | 1147202..1147609 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| KYX57_RS05700 (1147689) | 1147689..1147916 | + | 228 | WP_000921596.1 | Cro/CI family transcriptional regulator | - |
| KYX57_RS05705 (1147900) | 1147900..1148421 | + | 522 | WP_000705355.1 | toxin YdaT family protein | - |
| KYX57_RS05710 (1148402) | 1148402..1149367 | + | 966 | WP_000054514.1 | hypothetical protein | - |
| KYX57_RS05715 (1149408) | 1149408..1149830 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| KYX57_RS05720 (1149827) | 1149827..1150316 | + | 490 | Protein_1120 | class I SAM-dependent methyltransferase | - |
| KYX57_RS05725 (1150794) | 1150794..1151079 | + | 286 | Protein_1121 | hypothetical protein | - |
| KYX57_RS05730 (1151869) | 1151869..1152918 | + | 1050 | Protein_1122 | ISNCY family transposase ISCARN112 | Transposase |
| KYX57_RS05735 (1153039) | 1153039..1153188 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| KYX57_RS05740 (1153625) | 1153625..1153957 | - | 333 | WP_001317460.1 | FlxA-like family protein | - |
| KYX57_RS05745 (1154160) | 1154160..1154465 | - | 306 | WP_001326990.1 | protein YdfV | - |
| KYX57_RS05750 (1154490) | 1154490..1154729 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| KYX57_RS05755 (1154729) | 1154729..1155016 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| KYX57_RS05760 (1155088) | 1155088..1155243 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| KYX57_RS05765 (1155460) | 1155460..1155711 | + | 252 | WP_000980994.1 | protein Rem | - |
| KYX57_RS05770 (1155778) | 1155778..1156056 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| KYX57_RS05775 (1156058) | 1156058..1157107 | + | 1050 | WP_259482664.1 | DUF968 domain-containing protein | - |
| KYX57_RS05780 (1157121) | 1157121..1157873 | + | 753 | WP_001047135.1 | antitermination protein | - |
| KYX57_RS05785 (1158151) | 1158151..1158240 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| KYX57_RS05790 (1158295) | 1158295..1158507 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| KYX57_RS05795 (1158808) | 1158808..1159023 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| KYX57_RS05800 (1159387) | 1159387..1159557 | - | 171 | WP_001405948.1 | putative zinc-binding protein YnfU | - |
| KYX57_RS05805 (1159777) | 1159777..1159992 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| KYX57_RS05810 (1159997) | 1159997..1160307 | + | 311 | Protein_1138 | YdfR family protein | - |
| KYX57_RS05815 (1160304) | 1160304..1160837 | + | 534 | WP_001092971.1 | lysozyme | - |
| KYX57_RS05820 (1160834) | 1160834..1161332 | + | 499 | Protein_1140 | DUF2514 domain-containing protein | - |
| KYX57_RS05825 (1161696) | 1161696..1161908 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| KYX57_RS05830 (1161919) | 1161919..1162107 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| KYX57_RS05835 (1162110) | 1162110..1162175 | + | 66 | WP_122985912.1 | small protein YnfR | - |
| KYX57_RS05840 (1162255) | 1162255..1162410 | + | 156 | WP_001309517.1 | protein YnfN | - |
| KYX57_RS05845 (1162582) | 1162582..1162755 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| KYX57_RS05850 (1162907) | 1162907..1163317 | - | 411 | WP_040091073.1 | DUF1398 domain-containing protein | - |
| KYX57_RS05855 (1163375) | 1163375..1163608 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| KYX57_RS05860 (1163997) | 1163997..1164542 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| KYX57_RS05865 (1164517) | 1164517..1166442 | + | 1926 | WP_259482668.1 | phage terminase large subunit family protein | - |
| KYX57_RS05870 (1166439) | 1166439..1166645 | + | 207 | WP_000198149.1 | gpW family protein | - |
| KYX57_RS05875 (1166642) | 1166642..1168243 | + | 1602 | WP_001529148.1 | phage portal protein | - |
| KYX57_RS05880 (1168224) | 1168224..1169543 | + | 1320 | WP_000123311.1 | S49 family peptidase | - |
| KYX57_RS05885 (1169553) | 1169553..1169885 | + | 333 | WP_012304872.1 | head decoration protein | - |
| KYX57_RS05890 (1169941) | 1169941..1170966 | + | 1026 | WP_024232991.1 | major capsid protein | - |
| KYX57_RS05895 (1171008) | 1171008..1171403 | + | 396 | WP_032318908.1 | DNA-packaging protein FI | - |
| KYX57_RS05900 (1171415) | 1171415..1171768 | + | 354 | WP_000753001.1 | head-tail joining protein | - |
| KYX57_RS05905 (1171780) | 1171780..1172358 | + | 579 | WP_001541219.1 | phage tail protein | - |
| KYX57_RS05910 (1172355) | 1172355..1172750 | + | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| KYX57_RS05915 (1172758) | 1172758..1173498 | + | 741 | WP_001528302.1 | phage tail protein | - |
| KYX57_RS05920 (1173514) | 1173514..1173936 | + | 423 | WP_259482675.1 | phage minor tail protein G | - |
| KYX57_RS05925 (1173918) | 1173918..1174352 | + | 435 | WP_000459458.1 | phage tail assembly protein T | - |
| KYX57_RS05930 (1174345) | 1174345..1176906 | + | 2562 | WP_259482677.1 | phage tail tape measure protein | - |
| KYX57_RS05935 (1176903) | 1176903..1177232 | + | 330 | WP_000847345.1 | phage tail protein | - |
| KYX57_RS05940 (1177232) | 1177232..1177930 | + | 699 | WP_001152627.1 | phage minor tail protein L | - |
| KYX57_RS05945 (1177936) | 1177936..1178679 | + | 744 | WP_000194780.1 | C40 family peptidase | - |
| KYX57_RS05950 (1178676) | 1178676..1179248 | + | 573 | WP_000847666.1 | tail assembly protein | - |
| KYX57_RS05955 (1179309) | 1179309..1182791 | + | 3483 | WP_259482681.1 | host specificity protein J | - |
| KYX57_RS05960 (1182858) | 1182858..1183457 | + | 600 | WP_096998850.1 | Riboflavin biosynthesis protein RibF | VF |
| KYX57_RS05965 (1183522) | 1183522..1186545 | + | 3024 | WP_259482684.1 | prophage tail fiber N-terminal domain-containing protein | - |
| KYX57_RS05970 (1186545) | 1186545..1187120 | + | 576 | WP_000885587.1 | tail fiber assembly protein | - |
| KYX57_RS05975 (1187218) | 1187218..1187808 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| KYX57_RS05980 (1188126) | 1188126..1188359 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| KYX57_RS05985 (1188428) | 1188428..1188541 | - | 114 | WP_122985608.1 | YnaM/YnfT family protein | - |
| KYX57_RS05990 (1188596) | 1188596..1189293 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| KYX57_RS05995 (1189923) | 1189923..1191206 | + | 1284 | Protein_1175 | MHS family MFS transporter YdfJ | - |
| KYX57_RS06000 (1191295) | 1191295..1192755 | + | 1461 | WP_023281233.1 | mannitol dehydrogenase family protein | - |
| KYX57_RS06005 (1192791) | 1192791..1192994 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| KYX57_RS06010 (1193171) | 1193171..1193857 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| KYX57_RS06015 (1193946) | 1193946..1194692 | - | 747 | WP_000636568.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| KYX57_RS06020 (1194829) | 1194829..1196874 | + | 2046 | WP_001515364.1 | peptidyl-dipeptidase Dcp | - |
| KYX57_RS06025 (1196918) | 1196918..1197436 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| KYX57_RS06030 (1197712) | 1197712..1198104 | + | 393 | WP_000671731.1 | YdeI family stress tolerance OB fold protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|