MGE detailed information
MGE type: Prophage MGE length: 24546 bp
Accession: NZ_CP079770 Location: 1080824..1105369 Organism: Escherichia coli strain HL15 Replicon: chromosome
Accession: NZ_CP079770 Location: 1080824..1105369 Organism: Escherichia coli strain HL15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KYX58_RS06905 (1077073) | 1077073..1079499 | - | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| KYX58_RS06910 (1079698) | 1079698..1080003 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| KYX58_RS06915 (1080111) | 1080111..1080821 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| KYX58_RS06920 (1080824) | 1080824..1081384 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| KYX58_RS06925 (1081419) | 1081419..1081760 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| KYX58_RS06930 (1081895) | 1081895..1082221 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| KYX58_RS06935 (1082427) | 1082427..1083641 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| KYX58_RS06940 (1083653) | 1083653..1084672 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| KYX58_RS06945 (1084728) | 1084728..1084937 | - | 210 | WP_032306542.1 | protein YdfC | - |
| KYX58_RS06950 (1084967) | 1084967..1085095 | - | 129 | WP_000344964.1 | protein YdfB | - |
| KYX58_RS06955 (1085097) | 1085097..1085252 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| KYX58_RS06960 (1085419) | 1085419..1085826 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| KYX58_RS06965 (1085910) | 1085910..1086140 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| KYX58_RS06970 (1086124) | 1086124..1086315 | + | 192 | Protein_1087 | hypothetical protein | - |
| KYX58_RS06975 (1086292) | 1086292..1086414 | + | 123 | Protein_1088 | hypothetical protein | - |
| KYX58_RS06980 (1086414) | 1086414..1086763 | + | 350 | Protein_1089 | hypothetical protein | - |
| KYX58_RS06985 (1087408) | 1087408..1088430 | + | 1023 | Protein_1090 | ISNCY family transposase ISCARN112 | Transposase |
| KYX58_RS06990 (1088551) | 1088551..1088700 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| KYX58_RS06995 (1089137) | 1089137..1089469 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| KYX58_RS07000 (1089672) | 1089672..1089977 | - | 306 | WP_001326990.1 | protein YdfV | - |
| KYX58_RS07005 (1090002) | 1090002..1090241 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| KYX58_RS07010 (1090241) | 1090241..1090528 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| KYX58_RS07015 (1090600) | 1090600..1090755 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| KYX58_RS07020 (1090925) | 1090925..1091599 | + | 675 | Protein_1097 | DUF968 domain-containing protein | - |
| KYX58_RS07025 (1091613) | 1091613..1092365 | + | 753 | WP_001047135.1 | antitermination protein | - |
| KYX58_RS07030 (1092643) | 1092643..1092732 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| KYX58_RS07035 (1092787) | 1092787..1092999 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| KYX58_RS07040 (1093300) | 1093300..1093515 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| KYX58_RS07045 (1093879) | 1093879..1094049 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| KYX58_RS07050 (1094269) | 1094269..1094484 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| KYX58_RS07055 (1094489) | 1094489..1094800 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| KYX58_RS07060 (1094797) | 1094797..1095330 | + | 534 | WP_001092971.1 | lysozyme | - |
| KYX58_RS07065 (1095327) | 1095327..1095824 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| KYX58_RS07075 (1096964) | 1096964..1097176 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| KYX58_RS07080 (1097187) | 1097187..1097375 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| KYX58_RS07085 (1097378) | 1097378..1097443 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| KYX58_RS07090 (1097522) | 1097522..1097677 | + | 156 | WP_001309517.1 | protein YnfN | - |
| KYX58_RS07095 (1097849) | 1097849..1098022 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| KYX58_RS07100 (1098174) | 1098174..1098584 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| KYX58_RS07105 (1098642) | 1098642..1098875 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| KYX58_RS07110 (1099264) | 1099264..1099809 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| KYX58_RS07115 (1099784) | 1099784..1100929 | + | 1146 | Protein_1116 | phage terminase large subunit family protein | - |
| KYX58_RS07120 (1100929) | 1100929..1101363 | + | 435 | Protein_1117 | S49 family peptidase | - |
| KYX58_RS07125 (1101486) | 1101486..1102061 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| KYX58_RS07130 (1102159) | 1102159..1102749 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| KYX58_RS07135 (1103066) | 1103066..1103299 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| KYX58_RS07140 (1103368) | 1103368..1103481 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| KYX58_RS07145 (1104002) | 1104002..1105369 | + | 1368 | Protein_1122 | MHS family MFS transporter | - |
| KYX58_RS07150 (1105458) | 1105458..1106918 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| KYX58_RS07155 (1106953) | 1106953..1107156 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| KYX58_RS07160 (1107333) | 1107333..1108019 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| KYX58_RS07165 (1108108) | 1108108..1108854 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|