MGE detailed information
MGE type: Genomic_island MGE length: 22659 bp
Accession: NZ_CP079736 Location: 598902..621560 Organism: Escherichia coli strain GB2005-delet-a-f Replicon: chromosome
Accession: NZ_CP079736 Location: 598902..621560 Organism: Escherichia coli strain GB2005-delet-a-f Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KYX13_RS02880 (594352) | 594352..595212 | + | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| KYX13_RS02885 (595255) | 595255..596346 | - | 1092 | WP_000816992.1 | fimbrial protein | - |
| KYX13_RS02890 (596357) | 596357..598873 | - | 2517 | WP_001355538.1 | fimbria/pilus outer membrane usher protein | - |
| KYX13_RS02895 (598902) | 598902..599597 | - | 696 | WP_000044775.1 | hypothetical protein | VF |
| KYX13_RS02900 (599677) | 599677..600261 | - | 585 | WP_001045432.1 | fimbrial protein | - |
| KYX13_RS02905 (600662) | 600662..601417 | - | 756 | WP_001311150.1 | galactosamine-6-phosphate isomerase | - |
| KYX13_RS02910 (601418) | 601418..602209 | - | 792 | WP_000534347.1 | PTS galactosamine transporter subunit IID | - |
| KYX13_RS02915 (602199) | 602199..603002 | - | 804 | WP_000544489.1 | PTS galactosamine transporter subunit IIC | - |
| KYX13_RS02920 (603041) | 603041..603517 | - | 477 | WP_000203711.1 | PTS galactosamine transporter subunit IIB | - |
| KYX13_RS02925 (603684) | 603684..604544 | - | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| KYX13_RS02930 (604557) | 604557..605711 | - | 1155 | WP_001114869.1 | AgaS family sugar isomerase | - |
| KYX13_RS02935 (606062) | 606062..606619 | - | 558 | Protein_577 | amidohydrolase family protein | - |
| KYX13_RS02940 (606615) | 606615..606986 | - | 372 | Protein_578 | PTS sugar transporter subunit IIC | - |
| KYX13_RS02945 (606997) | 606997..607470 | - | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| KYX13_RS02950 (607493) | 607493..608773 | - | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| KYX13_RS02955 (609022) | 609022..609831 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| KYX13_RS02960 (609886) | 609886..610350 | - | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| KYX13_RS02965 (610350) | 610350..610685 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| KYX13_RS02970 (610834) | 610834..612405 | - | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| KYX13_RS02975 (612780) | 612780..614114 | + | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| KYX13_RS02980 (614130) | 614130..614900 | + | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| KYX13_RS02985 (614930) | 614930..615820 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| KYX13_RS02990 (615917) | 615917..617062 | + | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| KYX13_RS03000 (618085) | 618085..619272 | - | 1188 | WP_000484600.1 | YhaC family protein | - |
| KYX13_RS03005 (619294) | 619294..619833 | - | 540 | WP_000675733.1 | protein YhaB | - |
| KYX13_RS03010 (620089) | 620089..620307 | - | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| KYX13_RS03015 (620622) | 620622..621560 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| KYX13_RS03020 (621659) | 621659..622648 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| KYX13_RS03025 (622670) | 622670..624001 | + | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| KYX13_RS03030 (624027) | 624027..625235 | + | 1209 | WP_001295545.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|