MGE detailed information
MGE type: Genomic_island MGE length: 23842 bp
Accession: NZ_CP079736 Location: 3894017..3917858 Organism: Escherichia coli strain GB2005-delet-a-f Replicon: chromosome
Accession: NZ_CP079736 Location: 3894017..3917858 Organism: Escherichia coli strain GB2005-delet-a-f Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KYX13_RS19015 (3889588) | 3889588..3890034 | - | 447 | WP_001092461.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| KYX13_RS19020 (3890003) | 3890003..3890416 | - | 414 | WP_000204012.1 | DNA polymerase III subunit psi | - |
| KYX13_RS19025 (3890519) | 3890519..3891550 | + | 1032 | WP_001272330.1 | 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC | - |
| KYX13_RS19045 (3892179) | 3892179..3892415 | - | 237 | WP_001393508.1 | DUF1435 domain-containing protein | - |
| KYX13_RS19050 (3892556) | 3892556..3893344 | + | 789 | WP_000331618.1 | siderophore-iron reductase FhuF | - |
| KYX13_RS19055 (3893382) | 3893382..3894059 | - | 678 | WP_001301727.1 | DNA-binding transcriptional activator BglJ | - |
| KYX13_RS19060 (3894017) | 3894017..3894742 | - | 726 | WP_000936635.1 | hypothetical protein | VF |
| KYX13_RS19065 (3895361) | 3895361..3896131 | + | 771 | WP_001338213.1 | threonine/serine exporter ThrE family protein | - |
| KYX13_RS19070 (3896122) | 3896122..3896595 | + | 474 | WP_000538191.1 | threonine/serine exporter | - |
| KYX13_RS19075 (3896702) | 3896702..3897241 | + | 540 | WP_000098818.1 | primosomal protein DnaT | - |
| KYX13_RS19080 (3897244) | 3897244..3897981 | + | 738 | WP_000799911.1 | IS21 family transposase ISSme2 | Transposase |
| KYX13_RS19085 (3898030) | 3898030..3898524 | + | 495 | WP_001308243.1 | DUF2501 domain-containing protein YjjA | - |
| KYX13_RS19090 (3898778) | 3898778..3900787 | + | 2010 | Protein_3740 | phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | - |
| KYX13_RS19095 (3900894) | 3900894..3902102 | + | 1209 | WP_006250222.1 | IS4 family transposase IS10R | Transposase |
| KYX13_RS19100 (3903372) | 3903372..3904088 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| KYX13_RS19105 (3904108) | 3904108..3905214 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| KYX13_RS19110 (3905279) | 3905279..3906259 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| KYX13_RS22300 (3906369) | 3906369..3906574 | + | 206 | Protein_3745 | HNH endonuclease | - |
| KYX13_RS19115 (3906842) | 3906842..3908082 | - | 1241 | Protein_3746 | helicase YjhR | - |
| KYX13_RS22305 (3908198) | 3908198..3908329 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| KYX13_RS19125 (3908820) | 3908820..3909077 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| KYX13_RS19130 (3909089) | 3909089..3909634 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| KYX13_RS19135 (3909690) | 3909690..3910436 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| KYX13_RS19140 (3910605) | 3910605..3910823 | + | 219 | Protein_3751 | hypothetical protein | - |
| KYX13_RS19145 (3910861) | 3910861..3910977 | + | 117 | Protein_3752 | VOC family protein | - |
| KYX13_RS19150 (3911222) | 3911222..3912343 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| KYX13_RS19155 (3912340) | 3912340..3912618 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| KYX13_RS19160 (3912630) | 3912630..3913943 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| KYX13_RS19165 (3913956) | 3913956..3914762 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| KYX13_RS19170 (3914893) | 3914893..3915324 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| KYX13_RS19175 (3915336) | 3915336..3915968 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| KYX13_RS19180 (3915985) | 3915985..3916767 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| KYX13_RS19185 (3917070) | 3917070..3917858 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| KYX13_RS19190 (3917863) | 3917863..3918768 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| KYX13_RS19195 (3918779) | 3918779..3920746 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| KYX13_RS19200 (3920853) | 3920853..3922202 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|