MGE detailed information
MGE type: Genomic_island MGE length: 23842 bp
Accession: NZ_CP079735 Location: 3892925..3916766 Organism: Escherichia coli strain GB2005 Replicon: chromosome
Accession: NZ_CP079735 Location: 3892925..3916766 Organism: Escherichia coli strain GB2005 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KYX12_RS18980 (3888496) | 3888496..3888942 | - | 447 | WP_001092461.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| KYX12_RS18985 (3888911) | 3888911..3889324 | - | 414 | WP_000204012.1 | DNA polymerase III subunit psi | - |
| KYX12_RS18990 (3889427) | 3889427..3890458 | + | 1032 | WP_001272330.1 | 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC | - |
| KYX12_RS19010 (3891087) | 3891087..3891323 | - | 237 | WP_001393508.1 | DUF1435 domain-containing protein | - |
| KYX12_RS19015 (3891464) | 3891464..3892252 | + | 789 | WP_000331618.1 | siderophore-iron reductase FhuF | - |
| KYX12_RS19020 (3892290) | 3892290..3892967 | - | 678 | WP_001301727.1 | DNA-binding transcriptional activator BglJ | - |
| KYX12_RS19025 (3892925) | 3892925..3893650 | - | 726 | WP_000936635.1 | Putative transcription factor YjjQ | VF |
| KYX12_RS19030 (3894269) | 3894269..3895039 | + | 771 | WP_001338213.1 | threonine/serine exporter ThrE family protein | - |
| KYX12_RS19035 (3895030) | 3895030..3895503 | + | 474 | WP_000538191.1 | threonine/serine exporter | - |
| KYX12_RS19040 (3895610) | 3895610..3896149 | + | 540 | WP_000098818.1 | primosomal protein DnaT | - |
| KYX12_RS19045 (3896152) | 3896152..3896889 | + | 738 | WP_000799911.1 | IS21 family transposase ISSme2 | Transposase |
| KYX12_RS19050 (3896938) | 3896938..3897432 | + | 495 | WP_001308243.1 | DUF2501 domain-containing protein YjjA | - |
| KYX12_RS19055 (3897686) | 3897686..3899695 | + | 2010 | Protein_3734 | phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | - |
| KYX12_RS19060 (3899802) | 3899802..3901010 | + | 1209 | WP_006250222.1 | IS4 family transposase IS10R | Transposase |
| KYX12_RS19065 (3902280) | 3902280..3902996 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| KYX12_RS19070 (3903016) | 3903016..3904122 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| KYX12_RS19075 (3904187) | 3904187..3905167 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| KYX12_RS22250 (3905277) | 3905277..3905482 | + | 206 | Protein_3739 | HNH endonuclease | - |
| KYX12_RS19080 (3905750) | 3905750..3906990 | - | 1241 | Protein_3740 | helicase YjhR | - |
| KYX12_RS22255 (3907106) | 3907106..3907237 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| KYX12_RS19090 (3907728) | 3907728..3907985 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| KYX12_RS19095 (3907997) | 3907997..3908542 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| KYX12_RS19100 (3908598) | 3908598..3909344 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| KYX12_RS19105 (3909513) | 3909513..3909731 | + | 219 | Protein_3745 | hypothetical protein | - |
| KYX12_RS19110 (3909769) | 3909769..3909885 | + | 117 | Protein_3746 | VOC family protein | - |
| KYX12_RS19115 (3910130) | 3910130..3911251 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| KYX12_RS19120 (3911248) | 3911248..3911526 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| KYX12_RS19125 (3911538) | 3911538..3912851 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| KYX12_RS19130 (3912864) | 3912864..3913670 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| KYX12_RS19135 (3913801) | 3913801..3914232 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| KYX12_RS19140 (3914244) | 3914244..3914876 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| KYX12_RS19145 (3914893) | 3914893..3915675 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| KYX12_RS19150 (3915978) | 3915978..3916766 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| KYX12_RS19155 (3916771) | 3916771..3917676 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| KYX12_RS19160 (3917687) | 3917687..3919654 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| KYX12_RS19165 (3919761) | 3919761..3921110 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|