MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 41097 bp
Accession: NZ_CP078141 Location: 1..41097 Organism: Pseudomonas savastanoi pv. savastanoi strain PVFi1 Replicon: plasmid pPSv_PVFi1
Accession: NZ_CP078141 Location: 1..41097 Organism: Pseudomonas savastanoi pv. savastanoi strain PVFi1 Replicon: plasmid pPSv_PVFi1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HQ966_RS28870 (HQ966_28660) | 334..1077 | - | 744 | WP_002556041.1 | hypothetical protein | - |
| HQ966_RS28875 (HQ966_28665) | 1208..1489 | + | 282 | WP_060402791.1 | hypothetical protein | - |
| HQ966_RS28880 (HQ966_28670) | 1491..2699 | + | 1209 | WP_237901261.1 | IS91 family transposase | - |
| HQ966_RS28885 (HQ966_28675) | 2881..3090 | - | 210 | Protein_4 | replication protein A | - |
| HQ966_RS28890 (HQ966_28680) | 3271..4479 | - | 1209 | WP_237901262.1 | IS91 family transposase | - |
| HQ966_RS28895 (HQ966_28685) | 4481..4762 | - | 282 | WP_032710874.1 | hypothetical protein | - |
| HQ966_RS28900 (HQ966_28690) | 4830..4979 | - | 150 | Protein_7 | primase C-terminal domain-containing protein | - |
| HQ966_RS28905 (HQ966_28695) | 5407..5802 | + | 396 | WP_031597912.1 | CesT family type III secretion system chaperone | - |
| HQ966_RS28910 (HQ966_28700) | 5814..6485 | + | 672 | WP_002556083.1 | hypothetical protein | - |
| HQ966_RS28915 | 6605..7828 | + | 1224 | WP_002556082.1 | hypothetical protein | - |
| HQ966_RS28920 (HQ966_28710) | 8525..9154 | + | 630 | Protein_11 | IS110 family transposase ISPsy16 | Transposase |
| HQ966_RS28930 (HQ966_28720) | 10465..10875 | + | 411 | Protein_13 | IS110 family transposase ISPsy16 | Transposase |
| HQ966_RS28935 (HQ966_28725) | 11227..11391 | - | 165 | Protein_14 | S24 family peptidase | - |
| HQ966_RS28940 (HQ966_28730) | 11573..12781 | - | 1209 | WP_237901111.1 | IS91 family transposase | - |
| HQ966_RS28945 (HQ966_28735) | 12783..13064 | - | 282 | WP_060402791.1 | hypothetical protein | - |
| HQ966_RS28950 (HQ966_28740) | 13896..14642 | - | 747 | WP_031599030.1 | hypothetical protein | - |
| HQ966_RS28955 (HQ966_28745) | 15125..15553 | - | 429 | WP_031599033.1 | GntR family transcriptional regulator | - |
| HQ966_RS28960 (HQ966_28750) | 15922..16269 | + | 348 | Protein_19 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| HQ966_RS28965 (HQ966_28755) | 16237..17454 | - | 1218 | WP_256461770.1 | Mobilization protein A | Relaxase |
| HQ966_RS28970 (HQ966_28760) | 17473..17718 | + | 246 | WP_002555996.1 | hypothetical protein | - |
| HQ966_RS28975 (HQ966_28765) | 18045..18245 | + | 201 | WP_002555995.1 | hypothetical protein | Antitoxin Detail |
| HQ966_RS28980 (HQ966_28770) | 18245..18523 | + | 279 | WP_002555994.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HQ966_RS28985 (HQ966_28775) | 19559..20122 | + | 564 | WP_054082372.1 | hypothetical protein | - |
| HQ966_RS28990 (HQ966_28780) | 20126..20527 | + | 402 | WP_054082371.1 | hypothetical protein | - |
| HQ966_RS29180 | 20872..21006 | + | 135 | WP_256461769.1 | hypothetical protein | - |
| HQ966_RS28995 (HQ966_28785) | 20975..21541 | + | 567 | WP_217997453.1 | hypothetical protein | - |
| HQ966_RS29000 (HQ966_28790) | 21544..22860 | + | 1317 | WP_237901258.1 | hypothetical protein | - |
| HQ966_RS29005 (HQ966_28795) | 22959..23810 | - | 852 | WP_237901259.1 | hypothetical protein | - |
| HQ966_RS29010 (HQ966_28800) | 24348..24692 | + | 345 | Protein_30 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| HQ966_RS29015 (HQ966_28805) | 24796..25830 | + | 1035 | WP_015060660.1 | IS110 family transposase ISPsy16 | Transposase |
| HQ966_RS29020 (HQ966_28810) | 26529..26894 | + | 366 | WP_031599198.1 | helix-turn-helix transcriptional regulator | - |
| HQ966_RS29025 (HQ966_28815) | 27137..29092 | - | 1956 | WP_237901260.1 | Protein TraI | Relaxase |
| HQ966_RS29030 (HQ966_28820) | 29103..29432 | - | 330 | WP_031599434.1 | plasmid mobilization protein MobA | - |
| HQ966_RS29035 (HQ966_28825) | 29692..30036 | + | 345 | WP_031599149.1 | hypothetical protein | - |
| HQ966_RS29040 (HQ966_28830) | 30334..30612 | + | 279 | WP_004661031.1 | mobilization protein | - |
| HQ966_RS29045 (HQ966_28835) | 30679..30879 | - | 201 | WP_004666908.1 | hypothetical protein | - |
| HQ966_RS29050 (HQ966_28840) | 30947..31782 | - | 836 | Protein_38 | DUF945 domain-containing protein | - |
| HQ966_RS29055 (HQ966_28845) | 31829..32206 | - | 378 | WP_007247501.1 | hypothetical protein | - |
| HQ966_RS29060 (HQ966_28850) | 32929..33456 | + | 528 | WP_031599007.1 | PBECR2 nuclease fold domain-containing protein | - |
| HQ966_RS29065 (HQ966_28855) | 33626..34075 | - | 450 | WP_031599008.1 | TrfB-related DNA-binding protein | - |
| HQ966_RS29070 (HQ966_28860) | 34306..34926 | + | 621 | WP_005747119.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| HQ966_RS29075 (HQ966_28865) | 35869..36090 | - | 222 | WP_005620871.1 | hypothetical protein | - |
| HQ966_RS29080 (HQ966_28870) | 36128..36385 | - | 258 | Protein_44 | TraR/DksA family transcriptional regulator | - |
| HQ966_RS29085 (HQ966_28875) | 36729..37412 | + | 684 | WP_002556051.1 | AAA family ATPase | - |
| HQ966_RS29090 (HQ966_28880) | 37412..37693 | + | 282 | WP_004666803.1 | hypothetical protein | - |
| HQ966_RS29095 (HQ966_28885) | 38055..38972 | + | 918 | WP_044424093.1 | hypothetical protein | - |
| HQ966_RS29100 (HQ966_28890) | 39442..40380 | + | 939 | WP_057407281.1 | type III effector | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|