MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 37735 bp
Accession: NZ_CP078091 Location: 179328..217062 Organism: Porphyrobacter sp. ULC335 Replicon: chromosome
Accession: NZ_CP078091 Location: 179328..217062 Organism: Porphyrobacter sp. ULC335 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KVF90_RS00840 (KVF90_00840) | 174498..174767 | - | 270 | WP_264392966.1 | DUF3892 domain-containing protein | - |
| KVF90_RS00845 (KVF90_00845) | 174791..174979 | - | 189 | WP_264392967.1 | hypothetical protein | - |
| KVF90_RS00850 (KVF90_00850) | 174996..175256 | - | 261 | WP_264392968.1 | hypothetical protein | - |
| KVF90_RS00855 (KVF90_00855) | 175417..175770 | + | 354 | WP_264392969.1 | helix-turn-helix transcriptional regulator | - |
| KVF90_RS00860 (KVF90_00860) | 175767..176291 | + | 525 | WP_264392970.1 | ImmA/IrrE family metallo-endopeptidase | - |
| KVF90_RS00865 (KVF90_00865) | 176307..177689 | + | 1383 | WP_264392971.1 | exonuclease domain-containing protein | - |
| KVF90_RS00870 (KVF90_00870) | 177833..178138 | - | 306 | WP_264392972.1 | HigA family addiction module antitoxin | - |
| KVF90_RS00875 (KVF90_00875) | 178138..178419 | - | 282 | WP_264392973.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| KVF90_RS00880 (KVF90_00880) | 178574..179317 | - | 744 | WP_264392974.1 | DUF6118 family protein | - |
| KVF90_RS00885 (KVF90_00885) | 179328..182222 | - | 2895 | WP_264392975.1 | Ti-type conjugative transfer relaxase TraA | - |
| KVF90_RS00890 (KVF90_00890) | 182395..182700 | + | 306 | WP_264394593.1 | conjugal transfer protein TraD | - |
| KVF90_RS00895 (KVF90_00895) | 182723..182944 | + | 222 | WP_264392976.1 | conjugal transfer protein TraD | - |
| KVF90_RS00900 (KVF90_00900) | 182991..183932 | + | 942 | WP_264392977.1 | HEPN domain-containing protein | - |
| KVF90_RS00905 (KVF90_00905) | 183975..184766 | - | 792 | WP_264392978.1 | thermonuclease family protein | - |
| KVF90_RS00910 (KVF90_00910) | 185030..185287 | + | 258 | WP_264392979.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| KVF90_RS00915 (KVF90_00915) | 185284..186555 | + | 1272 | WP_264392980.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| KVF90_RS00920 (KVF90_00920) | 186909..187100 | - | 192 | Protein_183 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| KVF90_RS00925 (KVF90_00925) | 187201..187539 | + | 339 | WP_264392981.1 | hypothetical protein | - |
| KVF90_RS00930 (KVF90_00930) | 187674..188963 | - | 1290 | WP_264394595.1 | Hsp70 family protein | - |
| KVF90_RS00935 (KVF90_00935) | 189818..198322 | - | 8505 | WP_264394597.1 | Extracellular serine protease | VF |
| KVF90_RS00940 | 198500..199141 | - | 642 | Protein_187 | Extracellular serine protease | VF |
| KVF90_RS00945 (KVF90_00940) | 199631..200275 | + | 645 | WP_264392982.1 | TetR/AcrR family transcriptional regulator | - |
| KVF90_RS00950 (KVF90_00945) | 200736..201302 | - | 567 | WP_264392983.1 | thermonuclease family protein | - |
| KVF90_RS00955 (KVF90_00950) | 201617..201859 | - | 243 | WP_264392984.1 | hypothetical protein | - |
| KVF90_RS00960 (KVF90_00955) | 202097..202927 | + | 831 | WP_264392985.1 | HNH endonuclease | - |
| KVF90_RS00965 (KVF90_00960) | 202976..203383 | - | 408 | WP_264392986.1 | hypothetical protein | - |
| KVF90_RS00970 (KVF90_00965) | 203385..203768 | - | 384 | WP_264392987.1 | DUF3768 domain-containing protein | - |
| KVF90_RS00975 (KVF90_00970) | 203765..203953 | - | 189 | WP_264392988.1 | hypothetical protein | - |
| KVF90_RS00980 (KVF90_00975) | 204564..206927 | + | 2364 | WP_264392989.1 | DEAD/DEAH box helicase family protein | - |
| KVF90_RS00985 (KVF90_00980) | 206938..208410 | + | 1473 | WP_264392990.1 | class I SAM-dependent DNA methyltransferase | - |
| KVF90_RS00990 (KVF90_00985) | 208407..210059 | + | 1653 | WP_264392991.1 | restriction endonuclease subunit S | - |
| KVF90_RS00995 (KVF90_00990) | 210059..211906 | + | 1848 | WP_264392992.1 | AAA family ATPase | - |
| KVF90_RS01000 (KVF90_00995) | 212052..214154 | - | 2103 | WP_264392993.1 | DUF262 domain-containing HNH endonuclease family protein | - |
| KVF90_RS01005 (KVF90_01000) | 214274..215158 | - | 885 | WP_264392994.1 | zincin-like metallopeptidase domain-containing protein | - |
| KVF90_RS01010 (KVF90_01005) | 215597..215842 | + | 246 | WP_264392995.1 | AlpA family transcriptional regulator | - |
| KVF90_RS01015 (KVF90_01010) | 215839..217062 | - | 1224 | WP_264392996.1 | Prophage integrase IntS ; Integrase | Integrase |
| KVF90_RS01025 (KVF90_01020) | 217443..217679 | + | 237 | WP_264392998.1 | hypothetical protein | - |
| KVF90_RS01030 (KVF90_01025) | 217689..219320 | + | 1632 | WP_264392999.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| KVF90_RS01035 (KVF90_01030) | 219402..220760 | - | 1359 | WP_264393000.1 | glutamate--tRNA ligase | - |
| KVF90_RS01040 (KVF90_01035) | 220800..221240 | - | 441 | WP_264393001.1 | DNA-directed RNA polymerase subunit beta' | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|