MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 67728 bp
Accession: NZ_CP077705 Location: 1..67728 Organism: Salmonella enterica subsp. enterica strain CFSAN058565 Replicon: plasmid pCFSAN058565
Accession: NZ_CP077705 Location: 1..67728 Organism: Salmonella enterica subsp. enterica strain CFSAN058565 Replicon: plasmid pCFSAN058565
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DBO17_RS23610 (DBO17_023610) | 833..1303 | + | 471 | WP_000266945.1 | AfaD family invasin | - |
| DBO17_RS23615 (DBO17_023615) | 1709..2530 | + | 822 | WP_000119362.1 | polysaccharide deacetylase family protein | - |
| DBO17_RS23620 (DBO17_023620) | 2835..4061 | + | 1227 | WP_015062775.1 | phosphoadenosine phosphosulfate reductase | - |
| DBO17_RS23625 (DBO17_023625) | 4046..4687 | + | 642 | WP_000502861.1 | ParB/RepB/Spo0J family partition protein | - |
| DBO17_RS23630 (DBO17_023630) | 4757..4955 | + | 199 | Protein_5 | PerC family transcriptional regulator | - |
| DBO17_RS23635 (DBO17_023635) | 5450..6397 | + | 948 | WP_000970299.1 | LysR family transcriptional regulator | - |
| DBO17_RS23640 (DBO17_023640) | 8060..8932 | - | 873 | WP_065304522.1 | plasmid replication initiator RepA | - |
| DBO17_RS23645 (DBO17_023645) | 8913..8990 | - | 78 | WP_031606513.1 | RepA leader peptide Tap | - |
| DBO17_RS23650 (DBO17_023650) | 9248..9508 | - | 261 | WP_001278276.1 | replication regulatory protein RepA | - |
| DBO17_RS23655 (DBO17_023655) | 9747..13439 | - | 3693 | WP_108408510.1 | relaxase | - |
| DBO17_RS23660 (DBO17_023660) | 13429..13779 | - | 351 | WP_001293490.1 | hypothetical protein | Relaxase |
| DBO17_RS23665 (DBO17_023665) | 14085..14762 | - | 678 | WP_001282465.1 | hypothetical protein | - |
| DBO17_RS23670 (DBO17_023670) | 14770..15471 | - | 702 | WP_001668755.1 | StbB family protein | - |
| DBO17_RS23675 (DBO17_023675) | 15474..15902 | - | 429 | WP_000342968.1 | hypothetical protein | - |
| DBO17_RS23680 (DBO17_023680) | 16221..16658 | - | 438 | WP_000466316.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| DBO17_RS23685 (DBO17_023685) | 16683..16865 | - | 183 | WP_000833472.1 | type II toxin-antitoxin system HicA family toxin | - |
| DBO17_RS23690 (DBO17_023690) | 17214..19499 | - | 2286 | WP_015062761.1 | type IA DNA topoisomerase | - |
| DBO17_RS23695 (DBO17_023695) | 19564..20106 | - | 543 | WP_000157063.1 | single-stranded DNA-binding protein | - |
| DBO17_RS23700 (DBO17_023700) | 20254..20637 | - | 384 | WP_015062760.1 | hypothetical protein | - |
| DBO17_RS23705 (DBO17_023705) | 20706..21092 | - | 387 | WP_015062759.1 | exodeoxyribonuclease V subunit beta | - |
| DBO17_RS23710 (DBO17_023710) | 21094..21576 | - | 483 | WP_001078616.1 | hypothetical protein | VF |
| DBO17_RS23715 (DBO17_023715) | 21573..22193 | - | 621 | WP_000220345.1 | prepilin peptidase | - |
| DBO17_RS23720 (DBO17_023720) | 22196..22615 | - | 420 | WP_000834558.1 | type IV pilus biogenesis protein PilM | - |
| DBO17_RS23725 (DBO17_023725) | 22690..23973 | - | 1284 | WP_223203163.1 | hypothetical protein | VF |
| DBO17_RS23730 (DBO17_023730) | 24022..24960 | - | 939 | WP_001081000.1 | ATPase, T2SS/T4P/T4SS family | - |
| DBO17_RS23735 (DBO17_023735) | 25012..25524 | - | 513 | WP_000768888.1 | hypothetical protein | VF |
| DBO17_RS23740 (DBO17_023740) | 25581..26645 | - | 1065 | WP_108408511.1 | type II secretion system F family protein | - |
| DBO17_RS23745 (DBO17_023745) | 26632..28194 | - | 1563 | WP_001293909.1 | Type II secretion system protein E | VF |
| DBO17_RS23750 (DBO17_023750) | 28209..28667 | - | 459 | WP_000024175.1 | type IV pilus biogenesis protein PilP | - |
| DBO17_RS23755 (DBO17_023755) | 28645..30033 | - | 1389 | WP_000457431.1 | type 4b pilus protein PilO2 | - |
| DBO17_RS23760 (DBO17_023760) | 30023..31726 | - | 1704 | WP_015062753.1 | Outer membrane lipoprotein BfpB | VF |
| DBO17_RS23765 (DBO17_023765) | 31839..32831 | - | 993 | WP_015062752.1 | hypothetical protein | VF |
| DBO17_RS23770 (DBO17_023770) | 32861..33277 | - | 417 | WP_223203161.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| DBO17_RS23775 (DBO17_023775) | 33270..34889 | - | 1620 | WP_000529879.1 | type IV secretory system conjugative DNA transfer family protein | - |
| DBO17_RS23780 (DBO17_023780) | 34889..35254 | - | 366 | WP_001668757.1 | hypothetical protein | - |
| DBO17_RS23785 (DBO17_023785) | 35262..36329 | - | 1068 | WP_001279010.1 | Type IV secretion system protein VirB11 | VF |
| DBO17_RS23790 (DBO17_023790) | 36334..36546 | - | 213 | WP_000772401.1 | hypothetical protein | - |
| DBO17_RS23795 (DBO17_023795) | 36674..38014 | - | 1341 | WP_001070720.1 | Type IV secretion system protein virB10 | VF |
| DBO17_RS23800 (DBO17_023800) | 38011..38826 | - | 816 | WP_000206613.1 | Type IV secretion system protein PtlF | VF |
| DBO17_RS23805 (DBO17_023805) | 38823..39674 | - | 852 | WP_000897122.1 | type IV secretion system protein | - |
| DBO17_RS23810 (DBO17_023810) | 39830..40774 | - | 945 | WP_000963868.1 | type IV secretion system protein | - |
| DBO17_RS23815 (DBO17_023815) | 40783..41181 | - | 399 | WP_000821526.1 | hypothetical protein | - |
| DBO17_RS23820 (DBO17_023820) | 41263..41940 | - | 678 | WP_001086129.1 | type IV secretion system protein | - |
| DBO17_RS23825 (DBO17_023825) | 42247..43323 | - | 1077 | WP_108408513.1 | Adenosine monophosphate-protein transferase SoFic | VF |
| DBO17_RS23830 (DBO17_023830) | 43489..45981 | - | 2493 | WP_001150380.1 | VirB4 family type IV secretion system protein | - |
| DBO17_RS23835 (DBO17_023835) | 45938..46309 | - | 372 | WP_015062746.1 | hypothetical protein | VF |
| DBO17_RS23840 (DBO17_023840) | 46309..46662 | - | 354 | WP_001037906.1 | TrbC/VirB2 family protein | - |
| DBO17_RS23845 (DBO17_023845) | 46637..47335 | - | 699 | WP_015062745.1 | Type IV secretion system protein virB1 | VF |
| DBO17_RS23850 (DBO17_023850) | 47374..47625 | - | 252 | WP_000213776.1 | hypothetical protein | - |
| DBO17_RS23855 (DBO17_023855) | 47975..48430 | - | 456 | WP_001287806.1 | transcription termination/antitermination NusG family protein | - |
| DBO17_RS23860 (DBO17_023860) | 48487..48978 | - | 492 | WP_000872472.1 | transcription termination/antitermination NusG family protein | - |
| DBO17_RS23865 (DBO17_023865) | 49477..49764 | + | 288 | WP_000777022.1 | hypothetical protein | - |
| DBO17_RS23870 (DBO17_023870) | 49824..50252 | + | 429 | WP_000590032.1 | hypothetical protein | - |
| DBO17_RS23875 (DBO17_023875) | 50302..50595 | + | 294 | WP_001123824.1 | hypothetical protein | - |
| DBO17_RS23880 (DBO17_023880) | 51014..51832 | + | 819 | WP_031610040.1 | Tyrosine recombinase XerD | VF |
| DBO17_RS23885 (DBO17_023885) | 52019..52681 | + | 663 | WP_000520510.1 | peptidyl-arginine deiminase | - |
| DBO17_RS23890 (DBO17_023890) | 52797..53051 | + | 255 | WP_001187274.1 | hypothetical protein | - |
| DBO17_RS23895 (DBO17_023895) | 54121..54378 | - | 258 | Protein_58 | hypothetical protein | - |
| DBO17_RS23900 (DBO17_023900) | 54682..55611 | + | 930 | WP_000728916.1 | Recombination-promoting nuclease RpnA | VF |
| DBO17_RS23905 (DBO17_023905) | 56596..56830 | + | 235 | Protein_60 | Rpn family recombination-promoting nuclease/putative transposase | - |
| DBO17_RS23910 (DBO17_023910) | 57137..57832 | - | 696 | WP_000389613.1 | type II CAAX endopeptidase family protein | - |
| DBO17_RS23915 (DBO17_023915) | 58336..59118 | - | 783 | WP_000082174.1 | site-specific integrase | - |
| DBO17_RS24255 | 59131..59666 | - | 536 | Protein_63 | cytoplasmic protein | - |
| DBO17_RS23925 (DBO17_023925) | 59663..59953 | - | 291 | WP_001266178.1 | hypothetical protein | - |
| DBO17_RS23930 (DBO17_023930) | 59955..60260 | - | 306 | WP_001159874.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| DBO17_RS23935 (DBO17_023935) | 60262..60480 | - | 219 | WP_000813642.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| DBO17_RS23940 (DBO17_023940) | 61190..61435 | + | 246 | WP_000368362.1 | hypothetical protein | - |
| DBO17_RS23945 (DBO17_023945) | 61440..62402 | + | 963 | WP_000169858.1 | hypothetical protein | - |
| DBO17_RS24260 | 62480..62611 | - | 132 | Protein_69 | proQ/FINO family protein | - |
| DBO17_RS23950 (DBO17_023950) | 64070..64564 | + | 495 | WP_000786171.1 | hypothetical protein | - |
| DBO17_RS23955 (DBO17_023955) | 64624..65190 | + | 567 | WP_258229783.1 | Saf-pilin pilus formation protein SafA | - |
| DBO17_RS23960 (DBO17_023960) | 65265..66005 | + | 741 | WP_000691919.1 | Chaperone protein caf1M | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|