MGE detailed information
MGE type: Prophage MGE length: 75129 bp
Accession: NZ_CP077704 Location: 1875635..1950763 Organism: Salmonella enterica subsp. enterica strain CFSAN058565 Replicon: chromosome
Accession: NZ_CP077704 Location: 1875635..1950763 Organism: Salmonella enterica subsp. enterica strain CFSAN058565 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DBO17_RS08870 (1871334) | 1871334..1872791 | + | 1458 | WP_023204221.1 | EmmdR/YeeO family multidrug/toxin efflux MATE transporter | - |
| DBO17_RS08880 (1873659) | 1873659..1875113 | + | 1455 | WP_000428191.1 | AMP nucleosidase | - |
| DBO17_RS24025 (1875356) | 1875356..1875454 | - | 99 | Protein_1742 | DUF4102 domain-containing protein | - |
| DBO17_RS08885 (1875635) | 1875635..1875808 | - | 174 | WP_000957535.1 | hypothetical protein | - |
| DBO17_RS08890 (1875856) | 1875856..1875960 | + | 105 | Protein_1744 | DUF520 family protein | - |
| DBO17_RS08895 (1876018) | 1876018..1877669 | - | 1652 | Protein_1745 | hypothetical protein | - |
| DBO17_RS08900 (1877726) | 1877726..1879420 | - | 1695 | WP_108408460.1 | SEL1-like repeat protein | - |
| DBO17_RS08905 (1880104) | 1880104..1880382 | - | 279 | Protein_1747 | transposase | - |
| DBO17_RS08910 (1880468) | 1880468..1880935 | - | 468 | Protein_1748 | integrase domain-containing protein | - |
| DBO17_RS24030 (1881177) | 1881177..1881311 | + | 135 | WP_001524547.1 | hypothetical protein | - |
| DBO17_RS08915 (1881409) | 1881409..1881933 | - | 525 | WP_001219019.1 | peptidase | - |
| DBO17_RS08925 (1882594) | 1882594..1882899 | - | 306 | Protein_1751 | Arm DNA-binding domain-containing protein | - |
| DBO17_RS08930 (1883315) | 1883315..1883845 | + | 531 | WP_162920401.1 | hypothetical protein | - |
| DBO17_RS24035 (1883985) | 1883985..1884506 | + | 522 | WP_249266884.1 | hypothetical protein | - |
| DBO17_RS24040 (1884503) | 1884503..1885384 | + | 882 | WP_249266885.1 | hypothetical protein | - |
| DBO17_RS08940 (1885377) | 1885377..1886150 | + | 774 | WP_000137444.1 | chromosome partition protein MukE | - |
| DBO17_RS08945 (1886147) | 1886147..1890730 | + | 4584 | WP_079960415.1 | chromosome partition protein MukB | - |
| DBO17_RS08950 (1890730) | 1890730..1891704 | + | 975 | WP_000548606.1 | DUF2220 family protein | - |
| DBO17_RS08955 (1891817) | 1891817..1892593 | + | 777 | WP_000113631.1 | sigma-70 family RNA polymerase sigma factor | - |
| DBO17_RS08960 (1892590) | 1892590..1893159 | + | 570 | WP_000977357.1 | hypothetical protein | - |
| DBO17_RS08965 (1893152) | 1893152..1896544 | + | 3393 | WP_258229772.1 | ATP-dependent helicase | - |
| DBO17_RS08970 (1896632) | 1896632..1897387 | + | 756 | WP_001089671.1 | multiubiquitin domain-containing protein | - |
| DBO17_RS08975 (1897362) | 1897362..1898546 | + | 1185 | WP_023203877.1 | ThiF family adenylyltransferase | - |
| DBO17_RS08980 (1898540) | 1898540..1899004 | + | 465 | WP_000912782.1 | DUF6527 family protein | - |
| DBO17_RS08985 (1899381) | 1899381..1899848 | + | 468 | WP_000201258.1 | hypothetical protein | - |
| DBO17_RS08990 (1899848) | 1899848..1900066 | + | 219 | WP_161976074.1 | cell morphology transcriptional regulator XreR2 | - |
| DBO17_RS08995 (1900563) | 1900563..1900916 | + | 354 | WP_000269841.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DBO17_RS09000 (1900921) | 1900921..1901223 | + | 303 | WP_000533827.1 | XRE family transcriptional regulator | Antitoxin Detail |
| DBO17_RS09005 (1901729) | 1901729..1902613 | + | 885 | WP_023203878.1 | integrase domain-containing protein | - |
| DBO17_RS09010 (1903482) | 1903482..1904743 | - | 1262 | Protein_1769 | integrase arm-type DNA-binding domain-containing protein | - |
| DBO17_RS09020 (1905081) | 1905081..1905878 | - | 798 | WP_108408446.1 | DgsA anti-repressor MtfA | - |
| DBO17_RS09030 (1906170) | 1906170..1907159 | - | 990 | WP_000532847.1 | tyrosine-type recombinase/integrase | - |
| DBO17_RS09035 (1907161) | 1907161..1907388 | - | 228 | WP_001527041.1 | DUF4224 domain-containing protein | - |
| DBO17_RS09040 (1907428) | 1907428..1907997 | - | 570 | WP_001061334.1 | 3'-5' exonuclease | - |
| DBO17_RS09045 (1908001) | 1908001..1908582 | - | 582 | WP_020899398.1 | hypothetical protein | - |
| DBO17_RS09050 (1908593) | 1908593..1908850 | - | 258 | WP_000224241.1 | hypothetical protein | - |
| DBO17_RS09055 (1908852) | 1908852..1909385 | - | 534 | WP_000215886.1 | hypothetical protein | - |
| DBO17_RS09060 (1909456) | 1909456..1909995 | - | 540 | WP_000008351.1 | hypothetical protein | - |
| DBO17_RS09065 (1910132) | 1910132..1910959 | - | 828 | WP_108408445.1 | DUF2303 family protein | - |
| DBO17_RS09070 (1911017) | 1911017..1911388 | - | 372 | WP_000997191.1 | hypothetical protein | - |
| DBO17_RS24045 (1911612) | 1911612..1911731 | - | 120 | Protein_1780 | hypothetical protein | - |
| DBO17_RS09075 (1911928) | 1911928..1912152 | + | 225 | WP_023891434.1 | hypothetical protein | - |
| DBO17_RS09080 (1912115) | 1912115..1912453 | - | 339 | WP_001067432.1 | ClpX C4-type zinc finger protein | - |
| DBO17_RS09085 (1912659) | 1912659..1913354 | - | 696 | WP_001020640.1 | helix-turn-helix transcriptional regulator | - |
| DBO17_RS09090 (1913452) | 1913452..1913676 | + | 225 | WP_001191666.1 | helix-turn-helix transcriptional regulator | - |
| DBO17_RS09095 (1913705) | 1913705..1914259 | + | 555 | WP_000509731.1 | YmfL family putative regulatory protein | - |
| DBO17_RS24050 (1914399) | 1914399..1914578 | + | 180 | WP_001664303.1 | DUF4222 domain-containing protein | - |
| DBO17_RS09100 (1914508) | 1914508..1915398 | + | 891 | WP_223168167.1 | Rha family phage regulatory protein | - |
| DBO17_RS09105 (1915395) | 1915395..1915619 | + | 225 | WP_000620702.1 | hypothetical protein | - |
| DBO17_RS09110 (1915616) | 1915616..1916590 | + | 975 | WP_000096532.1 | conserved phage C-terminal domain-containing protein | - |
| DBO17_RS09115 (1916587) | 1916587..1917060 | + | 474 | WP_000054228.1 | PerC family transcriptional regulator | - |
| DBO17_RS09120 (1917057) | 1917057..1917938 | + | 882 | WP_000200164.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| DBO17_RS09125 (1917947) | 1917947..1918336 | + | 390 | WP_000779148.1 | RusA family crossover junction endodeoxyribonuclease | - |
| DBO17_RS09130 (1918353) | 1918353..1919213 | + | 861 | WP_001061452.1 | KilA-N domain-containing protein | - |
| DBO17_RS09135 (1919221) | 1919221..1920210 | + | 990 | WP_096753347.1 | DUF968 domain-containing protein | - |
| DBO17_RS09140 (1920224) | 1920224..1920976 | + | 753 | WP_020899401.1 | antitermination protein | - |
| DBO17_RS09145 (1921127) | 1921127..1921384 | + | 258 | WP_001624505.1 | hypothetical protein | - |
| DBO17_RS09150 (1921530) | 1921530..1921916 | + | 387 | WP_001283169.1 | phage holin family protein | - |
| DBO17_RS09155 (1921969) | 1921969..1922184 | + | 216 | WP_001471962.1 | phage holin family protein | - |
| DBO17_RS09160 (1922184) | 1922184..1922798 | + | 615 | WP_001624504.1 | glycoside hydrolase family 19 protein | - |
| DBO17_RS09165 (1922795) | 1922795..1923187 | + | 393 | WP_001530346.1 | DUF2570 domain-containing protein | - |
| DBO17_RS24055 (1923072) | 1923072..1923350 | + | 279 | WP_097053918.1 | peptidase | - |
| DBO17_RS24060 (1923428) | 1923428..1923982 | + | 555 | WP_001005132.1 | hypothetical protein | - |
| DBO17_RS09175 (1924033) | 1924033..1924383 | + | 351 | WP_001135098.1 | HNH endonuclease | - |
| DBO17_RS09180 (1924509) | 1924509..1925003 | + | 495 | WP_000929191.1 | phage terminase small subunit P27 family | - |
| DBO17_RS09185 (1925000) | 1925000..1926733 | + | 1734 | WP_033567282.1 | terminase large subunit | - |
| DBO17_RS09190 (1926745) | 1926745..1926927 | + | 183 | WP_000605609.1 | protein YmfR | - |
| DBO17_RS09195 (1926927) | 1926927..1928168 | + | 1242 | WP_000466255.1 | phage portal protein | - |
| DBO17_RS09200 (1928146) | 1928146..1928796 | + | 651 | WP_033567207.1 | HK97 family phage prohead protease | - |
| DBO17_RS09205 (1928811) | 1928811..1930016 | + | 1206 | WP_033572441.1 | phage major capsid protein | - |
| DBO17_RS09210 (1930066) | 1930066..1930266 | + | 201 | WP_033572442.1 | hypothetical protein | - |
| DBO17_RS09215 (1930269) | 1930269..1930592 | + | 324 | WP_000927721.1 | head-tail connector protein | - |
| DBO17_RS09220 (1930589) | 1930589..1930993 | + | 405 | WP_033567256.1 | phage head closure protein | - |
| DBO17_RS09225 (1930965) | 1930965..1931477 | + | 513 | WP_033567257.1 | hypothetical protein | - |
| DBO17_RS09230 (1931474) | 1931474..1932031 | + | 558 | WP_000779213.1 | hypothetical protein | - |
| DBO17_RS09235 (1932053) | 1932053..1932217 | + | 165 | WP_065305283.1 | DUF2635 domain-containing protein | - |
| DBO17_RS09240 (1932207) | 1932207..1933703 | + | 1497 | WP_033567258.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| DBO17_RS09245 (1933703) | 1933703..1934059 | + | 357 | WP_000515952.1 | phage tail tube protein | - |
| DBO17_RS09250 (1934089) | 1934089..1934382 | + | 294 | WP_080249853.1 | phage tail protein | - |
| DBO17_RS09255 (1934467) | 1934467..1936392 | + | 1926 | WP_000785381.1 | phage tail tape measure protein | - |
| DBO17_RS09260 (1936409) | 1936409..1936858 | + | 450 | WP_001033736.1 | hypothetical protein | - |
| DBO17_RS09265 (1936918) | 1936918..1938258 | + | 1341 | WP_000863828.1 | DNA circularization N-terminal domain-containing protein | - |
| DBO17_RS09270 (1938255) | 1938255..1939313 | + | 1059 | WP_108408521.1 | baseplate protein | - |
| DBO17_RS09275 (1939313) | 1939313..1939846 | + | 534 | WP_001273649.1 | phage baseplate assembly protein V | - |
| DBO17_RS09280 (1939851) | 1939851..1940264 | + | 414 | WP_000605055.1 | phage GP46 family protein | - |
| DBO17_RS09285 (1940257) | 1940257..1941336 | + | 1080 | WP_000785581.1 | baseplate J/gp47 family protein | - |
| DBO17_RS09290 (1941339) | 1941339..1941926 | + | 588 | WP_001207832.1 | DUF2313 domain-containing protein | - |
| DBO17_RS09295 (1941913) | 1941913..1943475 | + | 1563 | WP_000554735.1 | hypothetical protein | - |
| DBO17_RS09300 (1943445) | 1943445..1944050 | + | 606 | WP_022742744.1 | tail fiber assembly protein | - |
| DBO17_RS09305 (1944164) | 1944164..1944397 | - | 234 | WP_000836773.1 | cold shock protein YdfK | - |
| DBO17_RS09310 (1944472) | 1944472..1944585 | - | 114 | WP_122815478.1 | YnaM/YnfT family protein | - |
| DBO17_RS09315 (1944633) | 1944633..1945046 | - | 414 | WP_000842532.1 | hypothetical protein | - |
| DBO17_RS09320 (1945043) | 1945043..1945255 | - | 213 | WP_001093793.1 | hypothetical protein | - |
| DBO17_RS09325 (1945587) | 1945587..1945730 | + | 144 | Protein_1833 | tail fiber assembly protein | - |
| DBO17_RS09330 (1946449) | 1946449..1946610 | + | 162 | WP_001529333.1 | hypothetical protein | - |
| DBO17_RS09335 (1946737) | 1946737..1947156 | + | 420 | WP_000394197.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| DBO17_RS09340 (1947159) | 1947159..1948427 | + | 1269 | WP_079960396.1 | Y-family DNA polymerase | - |
| DBO17_RS09345 (1948882) | 1948882..1949094 | + | 213 | WP_000208509.1 | cold-shock protein | - |
| DBO17_RS09350 (1949105) | 1949105..1949293 | + | 189 | WP_024131163.1 | hypothetical protein | - |
| DBO17_RS09355 (1949552) | 1949552..1950763 | - | 1212 | WP_001080675.1 | porin OmpC | - |
| DBO17_RS09360 (1951413) | 1951413..1951724 | + | 312 | WP_072216807.1 | cell division protein DrpB | - |
| DBO17_RS09365 (1951804) | 1951804..1952502 | + | 699 | WP_079960395.1 | phosphohydrolase | - |
| DBO17_RS09370 (1952576) | 1952576..1954006 | + | 1431 | WP_001623639.1 | DNA cytosine methyltransferase | - |
| DBO17_RS09375 (1953987) | 1953987..1954457 | + | 471 | WP_000785978.1 | very short patch repair endonuclease | - |
| DBO17_RS09380 (1954446) | 1954446..1955366 | - | 921 | WP_001212263.1 | drug/metabolite exporter YedA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|