MGE detailed information
MGE type: Prophage MGE length: 56131 bp
Accession: NZ_CP077702 Location: 1982556..2038686 Organism: Salmonella enterica subsp. enterica strain CFSAN058588 Replicon: chromosome
Accession: NZ_CP077702 Location: 1982556..2038686 Organism: Salmonella enterica subsp. enterica strain CFSAN058588 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DAX60_RS09495 () | 1978138..1978590 | + | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
| DAX60_RS09500 () | 1978620..1979360 | + | 741 | WP_023226401.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| DAX60_RS09505 () | 1979397..1979918 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| DAX60_RS09510 () | 1979920..1980519 | - | 600 | WP_000716739.1 | YebB family permuted papain-like enzyme | - |
| DAX60_RS09515 () | 1980730..1981422 | + | 693 | WP_001529198.1 | hypothetical protein | - |
| DAX60_RS09520 () | 1981936..1982547 | + | 612 | WP_000580333.1 | Holliday junction branch migration protein RuvA | - |
| DAX60_RS09525 () | 1982556..1983566 | + | 1011 | WP_001529221.1 | Holliday junction branch migration DNA helicase RuvB | - |
| DAX60_RS09530 () | 1983645..1984430 | - | 786 | WP_000571507.1 | hypothetical protein | VF |
| DAX60_RS09535 () | 1984427..1985182 | - | 756 | WP_000203013.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| DAX60_RS09540 () | 1985261..1986205 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| DAX60_RS09545 () | 1986221..1987540 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| DAX60_RS09550 () | 1987657..1988628 | + | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| DAX60_RS09555 () | 1988701..1990143 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| DAX60_RS09560 () | 1990267..1991136 | - | 870 | WP_001056719.1 | MurR/RpiR family transcriptional regulator | - |
| DAX60_RS09565 () | 1991478..1992953 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| DAX60_RS09570 () | 1993188..1994999 | + | 1812 | WP_001529262.1 | phosphogluconate dehydratase | - |
| DAX60_RS09575 () | 1995037..1995678 | + | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| DAX60_RS09580 () | 1995778..1996956 | - | 1179 | WP_001529220.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| DAX60_RS09585 () | 1997087..1997377 | + | 291 | WP_001529258.1 | DNA damage-inducible protein YebG | - |
| DAX60_RS09590 () | 1997445..1997798 | + | 354 | WP_001042123.1 | protein YebF | - |
| DAX60_RS09595 () | 1997892..1998551 | + | 660 | WP_001529233.1 | tellurite resistance TerB family protein | - |
| DAX60_RS09600 () | 1998764..2000815 | + | 2052 | WP_023226402.1 | oligopeptidase B | - |
| DAX60_RS09605 () | 2000852..2001550 | - | 699 | WP_000944280.1 | exodeoxyribonuclease X | - |
| DAX60_RS09610 () | 2001574..2002230 | - | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| DAX60_RS09615 () | 2002337..2002567 | - | 231 | WP_000856225.1 | DNA polymerase III subunit theta | - |
| DAX60_RS09620 () | 2002705..2003079 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| DAX60_RS09625 () | 2003080..2003955 | + | 876 | WP_001529229.1 | copper homeostasis membrane protein CopD | - |
| DAX60_RS09630 () | 2003972..2004325 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2004427..2004570 | - | 144 | - | - | Antitoxin Detail |
| - | 2004465..2004568 | + | 104 | - | - | Toxin Detail |
| DAX60_RS09635 () | 2004699..2005778 | - | 1080 | WP_001529245.1 | hypothetical protein ; Integrase | Integrase |
| DAX60_RS09640 () | 2005811..2006959 | - | 1149 | Protein_1892 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| DAX60_RS09645 () | 2006951..2007199 | + | 249 | Protein_1893 | glycoside hydrolase family 19 protein | - |
| DAX60_RS09650 () | 2007196..2007729 | + | 534 | WP_001529209.1 | DUF2514 domain-containing protein | - |
| DAX60_RS09655 () | 2007986..2008153 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| DAX60_RS09660 () | 2008456..2008947 | + | 492 | WP_000348550.1 | DUF1441 family protein | - |
| DAX60_RS09665 () | 2008934..2009501 | + | 568 | Protein_1897 | phage terminase large subunit family protein | - |
| DAX60_RS09670 () | 2009500..2010759 | + | 1260 | Protein_1898 | tail fiber protein | - |
| DAX60_RS09675 () | 2010734..2011129 | + | 396 | Protein_1899 | phage tail protein | - |
| DAX60_RS09680 () | 2011119..2011703 | + | 585 | WP_058800107.1 | tail fiber assembly protein | - |
| DAX60_RS09685 () | 2011800..2012000 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| DAX60_RS23075 () | 2012390..2012570 | - | 181 | Protein_1902 | IS3 family transposase | - |
| DAX60_RS09690 () | 2012561..2012662 | + | 102 | Protein_1903 | arsenic transporter | - |
| DAX60_RS23080 () | 2013284..2013516 | + | 233 | Protein_1904 | helix-turn-helix domain-containing protein | - |
| DAX60_RS09700 () | 2013843..2014457 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| DAX60_RS09705 () | 2014467..2014625 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| DAX60_RS09710 () | 2014757..2015671 | - | 915 | WP_001529197.1 | DMT family transporter | - |
| DAX60_RS09715 () | 2016462..2017081 | - | 620 | Protein_1908 | fimbrial protein | - |
| DAX60_RS09720 () | 2017014..2017184 | + | 171 | Protein_1909 | IS256 family transposase IS285 | Transposase |
| DAX60_RS09725 () | 2017191..2017719 | + | 529 | Protein_1910 | IS256 family transposase ISEc39 | Transposase |
| DAX60_RS09730 () | 2017865..2018005 | - | 141 | WP_031607419.1 | hypothetical protein | - |
| DAX60_RS09735 () | 2018171..2018439 | - | 269 | Protein_1912 | hypothetical protein | - |
| DAX60_RS09740 () | 2018809..2019228 | + | 420 | WP_015405895.1 | GNAT family N-acetyltransferase | - |
| DAX60_RS09745 () | 2019616..2020092 | - | 477 | WP_001529212.1 | hypothetical protein | - |
| DAX60_RS09750 () | 2020421..2020816 | - | 396 | WP_000422881.1 | DUF1398 domain-containing protein | - |
| DAX60_RS09755 () | 2021500..2022222 | + | 723 | WP_001529242.1 | hypothetical protein | VF |
| DAX60_RS09760 () | 2022507..2022671 | + | 165 | WP_001134856.1 | membrane protein | - |
| DAX60_RS09765 () | 2022895..2023545 | + | 651 | WP_001529250.1 | protein-serine/threonine phosphatase | - |
| DAX60_RS09770 () | 2023564..2023755 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| DAX60_RS09775 () | 2023866..2024102 | - | 237 | WP_024131167.1 | YebV family protein | - |
| DAX60_RS09780 () | 2024220..2025659 | - | 1440 | WP_001604881.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| DAX60_RS09785 () | 2025737..2028370 | - | 2634 | WP_001529214.1 | hypothetical protein | VF |
| DAX60_RS09790 () | 2028339..2029622 | - | 1284 | WP_001207293.1 | membrane integrity lipid transport subunit YebS | - |
| DAX60_RS09795 () | 2029751..2030248 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| DAX60_RS09800 () | 2030346..2031032 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| DAX60_RS09805 () | 2031052..2033100 | + | 2049 | WP_001529239.1 | carboxy terminal-processing peptidase | - |
| DAX60_RS09810 () | 2033293..2034174 | + | 882 | WP_000984498.1 | protease HtpX | - |
| DAX60_RS09815 () | 2034222..2035595 | - | 1374 | WP_023139951.1 | MFS transporter | - |
| DAX60_RS09820 () | 2035771..2036562 | + | 792 | WP_001262196.1 | DNA-binding transcriptional regulator KdgR | - |
| DAX60_RS09825 () | 2036774..2037013 | - | 240 | WP_001236778.1 | invasion protein YobH | - |
| DAX60_RS09830 () | 2037171..2037314 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| DAX60_RS09835 () | 2037385..2037672 | + | 288 | WP_001000660.1 | YebO family protein | - |
| DAX60_RS09840 () | 2038321..2038464 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| DAX60_RS09845 () | 2038477..2038686 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| DAX60_RS09850 () | 2038906..2040651 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| DAX60_RS09855 () | 2040717..2041526 | + | 810 | WP_000010925.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| DAX60_RS09860 () | 2041523..2042089 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| DAX60_RS09865 () | 2042499..2042957 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|