MGE detailed information
MGE type: Mobilizable plasmid MGE length: 26022 bp
Accession: NZ_CP077701 Location: 1..26022 Organism: Salmonella enterica subsp. enterica strain CFSAN058591 Replicon: plasmid pCFSAN058591_02
Accession: NZ_CP077701 Location: 1..26022 Organism: Salmonella enterica subsp. enterica strain CFSAN058591 Replicon: plasmid pCFSAN058591_02
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DAY16_RS24340 (DAY16_024335) | 2387..3088 | + | 702 | WP_058645039.1 | type IV secretion system protein | - |
| DAY16_RS24345 (DAY16_024340) | 3100..3324 | + | 225 | WP_032152566.1 | EexN family lipoprotein | - |
| DAY16_RS24350 (DAY16_024345) | 3337..4398 | + | 1062 | WP_070810089.1 | type IV secretion system protein | - |
| DAY16_RS24355 (DAY16_024350) | 4490..4627 | + | 138 | WP_000825479.1 | hypothetical protein | - |
| DAY16_RS24360 (DAY16_024355) | 4620..5303 | + | 684 | WP_058645023.1 | Type IV secretion system protein PtlE | VF |
| DAY16_RS24365 (DAY16_024360) | 5300..6208 | + | 909 | WP_094137825.1 | P-type conjugative transfer protein VirB9 | - |
| DAY16_RS24370 (DAY16_024365) | 6252..7514 | + | 1263 | WP_058645024.1 | Type IV secretion system protein virB10 | VF |
| DAY16_RS24375 (DAY16_024370) | 7526..7846 | + | 321 | WP_058645025.1 | hypothetical protein | - |
| DAY16_RS24380 (DAY16_024375) | 7836..8861 | + | 1026 | WP_070810088.1 | Type IV secretion system protein VirB11 | VF |
| DAY16_RS24385 (DAY16_024380) | 8858..9256 | + | 399 | WP_070800521.1 | cag pathogenicity island Cag12 family protein | - |
| DAY16_RS24390 (DAY16_024385) | 9292..9597 | + | 306 | WP_070810087.1 | conjugal transfer protein | - |
| DAY16_RS24395 (DAY16_024390) | 9631..9936 | + | 306 | WP_058645028.1 | hypothetical protein | - |
| DAY16_RS24400 (DAY16_024395) | 10716..12452 | + | 1737 | WP_058645029.1 | type IV secretion system DNA-binding domain-containing protein | - |
| DAY16_RS24405 (DAY16_024400) | 12461..13216 | + | 756 | WP_063443750.1 | MobC family replication-relaxation protein | - |
| DAY16_RS24410 (DAY16_024405) | 13253..13726 | + | 474 | WP_058645031.1 | thermonuclease family protein | - |
| DAY16_RS24415 (DAY16_024410) | 13832..14128 | + | 297 | WP_223156219.1 | hypothetical protein | - |
| DAY16_RS24420 (DAY16_024415) | 14166..14399 | - | 234 | WP_004178129.1 | hypothetical protein | - |
| DAY16_RS24425 (DAY16_024420) | 14440..15087 | - | 648 | WP_004178130.1 | ParA family protein | - |
| DAY16_RS24430 (DAY16_024425) | 15207..15419 | - | 213 | Protein_19 | sprT domain-containing protein | - |
| DAY16_RS24435 (DAY16_024430) | 15499..15939 | - | 441 | Protein_20 | AAA family ATPase | - |
| DAY16_RS24440 (DAY16_024435) | 16054..16200 | - | 147 | WP_057394955.1 | colicin release lysis protein | - |
| DAY16_RS24445 (DAY16_024440) | 16284..16541 | - | 258 | WP_070794402.1 | bacteriocin immunity protein | - |
| DAY16_RS24450 (DAY16_024445) | 16544..18295 | - | 1752 | WP_058645033.1 | colicin-like bacteriocin tRNase domain-containing protein | - |
| DAY16_RS24455 (DAY16_024450) | 18760..19115 | - | 356 | Protein_24 | SprT-like domain-containing protein | - |
| DAY16_RS24820 | 19534..19647 | - | 114 | Protein_25 | XRE family transcriptional regulator | - |
| DAY16_RS24460 (DAY16_024455) | 19663..19827 | - | 165 | WP_165801018.1 | hypothetical protein | - |
| DAY16_RS24465 (DAY16_024460) | 19868..20182 | - | 315 | WP_058645035.1 | CcdB family protein | Toxin Detail |
| DAY16_RS24470 (DAY16_024465) | 20185..20421 | - | 237 | WP_025861853.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| DAY16_RS24475 (DAY16_024470) | 20530..20961 | - | 432 | WP_058645036.1 | hypothetical protein | - |
| DAY16_RS24480 (DAY16_024475) | 21768..22475 | - | 708 | WP_254891021.1 | RepA protein | - |
| DAY16_RS24485 (DAY16_024480) | 22936..23295 | - | 360 | WP_057517074.1 | helix-turn-helix transcriptional regulator | - |
| DAY16_RS24490 (DAY16_024485) | 23545..24000 | + | 456 | WP_058645037.1 | transcription termination/antitermination NusG family protein | - |
| DAY16_RS24495 (DAY16_024490) | 24072..24287 | + | 216 | WP_004178170.1 | hypothetical protein | - |
| DAY16_RS24500 (DAY16_024495) | 24292..24510 | + | 219 | WP_004178172.1 | hypothetical protein | - |
| DAY16_RS24825 | 24507..24629 | - | 123 | WP_254891022.1 | hypothetical protein | - |
| DAY16_RS24505 (DAY16_024500) | 24628..25338 | + | 711 | WP_058645038.1 | Type IV secretion system protein virB1 | VF |
| DAY16_RS24510 (DAY16_024505) | 25335..25640 | + | 306 | WP_012457109.1 | Type IV secretion system protein virB2 | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|