MGE detailed information
MGE type: Conjugative plasmid MGE length: 136494 bp
Accession: NZ_CP077700 Location: 1..136494 Organism: Salmonella enterica subsp. enterica strain CFSAN058591 Replicon: plasmid pCFSAN058591_01
Accession: NZ_CP077700 Location: 1..136494 Organism: Salmonella enterica subsp. enterica strain CFSAN058591 Replicon: plasmid pCFSAN058591_01
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DAY16_RS23630 (DAY16_023625) | 1265..2005 | - | 741 | WP_001066959.1 | tyrosine-type recombinase/integrase | - |
| DAY16_RS23635 (DAY16_023630) | 3063..3917 | + | 855 | WP_001644065.1 | AraC family transcriptional regulator | - |
| DAY16_RS23645 (DAY16_023640) | 6499..6792 | + | 294 | WP_024153544.1 | hypothetical protein | - |
| DAY16_RS23650 (DAY16_023645) | 7545..7946 | + | 402 | WP_230319598.1 | CaiF/GrlA family transcriptional regulator | - |
| DAY16_RS23655 (DAY16_023650) | 7939..8694 | + | 756 | WP_023230123.1 | transcriptional activator SprB | - |
| DAY16_RS23660 (DAY16_023655) | 9420..9536 | + | 117 | Protein_7 | IS3 family transposase IS1351 | Transposase |
| DAY16_RS23665 (DAY16_023660) | 9762..10770 | - | 1009 | Protein_8 | IS110 family transposase ISSaen1 | Transposase |
| DAY16_RS23675 (DAY16_023670) | 11034..11435 | - | 402 | WP_001644747.1 | phage holin family protein | - |
| DAY16_RS23680 (DAY16_023675) | 11579..11932 | - | 354 | WP_001644748.1 | hypothetical protein | - |
| DAY16_RS23685 (DAY16_023680) | 12337..12585 | + | 249 | WP_024153731.1 | DUF883 family protein | - |
| DAY16_RS23690 (DAY16_023685) | 12638..12991 | + | 354 | WP_001644748.1 | hypothetical protein | - |
| DAY16_RS23695 (DAY16_023690) | 13135..13536 | + | 402 | WP_001644747.1 | phage holin family protein | - |
| DAY16_RS23700 (DAY16_023695) | 13533..13826 | + | 294 | WP_079905948.1 | YqjK family protein | - |
| DAY16_RS24775 | 13932..14153 | - | 222 | Protein_15 | sprT domain-containing protein | - |
| DAY16_RS23705 (DAY16_023700) | 14523..14804 | - | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| DAY16_RS23710 (DAY16_023705) | 14785..15114 | - | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DAY16_RS24780 | 15488..15835 | + | 348 | WP_253185255.1 | UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase | VF |
| DAY16_RS24785 | 15859..16359 | + | 501 | Protein_19 | DegT/DnrJ/EryC1/StrS family aminotransferase | - |
| DAY16_RS23720 (DAY16_023715) | 16379..16610 | - | 232 | Protein_20 | IS6 family transposase | - |
| DAY16_RS23725 (DAY16_023720) | 16866..17132 | + | 267 | WP_024153813.1 | hypothetical protein | - |
| DAY16_RS24790 | 18106..18282 | - | 177 | WP_230319613.1 | fimbria/pilus outer membrane usher protein | - |
| DAY16_RS23735 (DAY16_023730) | 18614..18964 | - | 351 | Protein_23 | alpha/beta hydrolase | - |
| DAY16_RS23740 (DAY16_023735) | 19017..23549 | - | 4533 | WP_024153811.1 | Hemolysin | VF |
| DAY16_RS23745 (DAY16_023740) | 23595..25265 | - | 1671 | WP_024153810.1 | Hemolysin transporter protein ShlB | VF |
| DAY16_RS23750 (DAY16_023745) | 25684..26172 | - | 489 | WP_023230137.1 | hypothetical protein | - |
| DAY16_RS23755 (DAY16_023750) | 26191..27021 | - | 831 | WP_223156232.1 | Outer membrane protein A | VF |
| DAY16_RS23760 (DAY16_023755) | 27075..31430 | - | 4356 | WP_254679737.1 | Autotransporter adhesin BtaE | VF |
| DAY16_RS23765 (DAY16_023760) | 33154..34172 | - | 1019 | Protein_29 | plasmid replication initiator RepA | - |
| DAY16_RS23770 (DAY16_023765) | 35118..35663 | + | 546 | WP_024153807.1 | transcription termination factor NusG | - |
| DAY16_RS23775 (DAY16_023770) | 35845..36501 | + | 657 | WP_023229167.1 | hypothetical protein | - |
| DAY16_RS23780 (DAY16_023775) | 36603..36779 | + | 177 | WP_086375328.1 | TraR/DksA C4-type zinc finger protein | - |
| DAY16_RS23785 (DAY16_023780) | 36791..36985 | + | 195 | WP_001188429.1 | hypothetical protein | - |
| DAY16_RS23790 (DAY16_023785) | 37111..37488 | + | 378 | WP_139147703.1 | hypothetical protein | - |
| DAY16_RS23795 (DAY16_023790) | 37566..38534 | + | 969 | WP_051142412.1 | hypothetical protein | VF |
| DAY16_RS23800 (DAY16_023795) | 38534..38965 | + | 432 | WP_001644787.1 | hypothetical protein | VF |
| DAY16_RS23805 (DAY16_023800) | 38980..40602 | + | 1623 | WP_077957289.1 | Outer membrane lipoprotein BfpB | VF |
| DAY16_RS23810 (DAY16_023805) | 40607..41890 | + | 1284 | WP_024153801.1 | type 4b pilus protein PilO2 | - |
| DAY16_RS23815 (DAY16_023810) | 41877..42407 | + | 531 | WP_024153800.1 | type IV pilus biogenesis protein PilP | - |
| DAY16_RS23820 (DAY16_023815) | 42439..43938 | + | 1500 | WP_001644792.1 | Type II secretion system protein E | VF |
| DAY16_RS23825 (DAY16_023820) | 43931..45046 | + | 1116 | WP_051142411.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| DAY16_RS23830 (DAY16_023825) | 45072..45665 | + | 594 | WP_024153799.1 | hypothetical protein | VF |
| DAY16_RS23835 (DAY16_023830) | 45679..46149 | + | 471 | WP_023208005.1 | hypothetical protein | VF |
| DAY16_RS23840 (DAY16_023835) | 46149..46760 | + | 612 | WP_024153798.1 | hypothetical protein | VF |
| DAY16_RS23845 (DAY16_023840) | 46859..48163 | + | 1305 | WP_042836862.1 | hypothetical protein | VF |
| DAY16_RS23850 (DAY16_023845) | 48247..48537 | - | 291 | WP_024146663.1 | hypothetical protein | - |
| DAY16_RS23855 (DAY16_023850) | 48718..49872 | + | 1155 | WP_000089546.1 | site-specific integrase | - |
| DAY16_RS23860 (DAY16_023855) | 49997..50452 | + | 456 | WP_000775487.1 | hypothetical protein | VF |
| DAY16_RS23865 (DAY16_023860) | 50518..51270 | + | 753 | WP_100218507.1 | hypothetical protein | VF |
| DAY16_RS23870 (DAY16_023865) | 51267..52436 | + | 1170 | WP_024153796.1 | putative protein YggR | VF |
| DAY16_RS23875 (DAY16_023870) | 52426..52692 | + | 267 | WP_024153795.1 | IcmT/TraK family protein | - |
| DAY16_RS23880 (DAY16_023875) | 52704..56153 | + | 3450 | WP_070794374.1 | DUF5710 domain-containing protein | - |
| DAY16_RS23885 (DAY16_023880) | 56169..56639 | + | 471 | WP_000735118.1 | hypothetical protein | - |
| DAY16_RS23890 (DAY16_023885) | 56702..57379 | + | 678 | WP_024153792.1 | hypothetical protein | VF |
| DAY16_RS23895 (DAY16_023890) | 57376..58404 | + | 1029 | WP_024153791.1 | hypothetical protein | VF |
| DAY16_RS23900 (DAY16_023895) | 58404..59606 | + | 1203 | WP_024153790.1 | hypothetical protein | VF |
| DAY16_RS23905 (DAY16_023900) | 59603..60358 | + | 756 | WP_024153789.1 | hypothetical protein | - |
| DAY16_RS23910 (DAY16_023905) | 60368..60898 | + | 531 | WP_000348307.1 | conjugal transfer protein TraQ | - |
| DAY16_RS23915 (DAY16_023910) | 60914..61312 | + | 399 | WP_000404336.1 | hypothetical protein | - |
| DAY16_RS23920 (DAY16_023915) | 61370..61822 | + | 453 | WP_024153787.1 | hypothetical protein | - |
| DAY16_RS23925 (DAY16_023920) | 61927..62229 | + | 303 | WP_024153786.1 | hypothetical protein | - |
| DAY16_RS23930 (DAY16_023925) | 62285..62893 | + | 609 | WP_024153785.1 | hypothetical protein | - |
| DAY16_RS23935 (DAY16_023930) | 62890..65952 | + | 3063 | WP_024153784.1 | conjugal transfer protein | - |
| DAY16_RS23940 (DAY16_023935) | 65971..67191 | + | 1221 | WP_024153783.1 | conjugal transfer protein TraW | - |
| DAY16_RS23945 (DAY16_023940) | 67188..67706 | + | 519 | WP_024153782.1 | conjugal transfer protein TraX | - |
| DAY16_RS23950 (DAY16_023945) | 67758..69890 | + | 2133 | WP_024153781.1 | DotA/TraY family protein | - |
| DAY16_RS23955 (DAY16_023950) | 69901..70446 | + | 546 | WP_024153780.1 | hypothetical protein | - |
| DAY16_RS23960 (DAY16_023955) | 70548..71063 | - | 516 | WP_023228531.1 | GNAT family N-acetyltransferase | - |
| DAY16_RS23965 (DAY16_023960) | 71047..71340 | - | 294 | WP_000987497.1 | DUF1778 domain-containing protein | - |
| DAY16_RS23970 (DAY16_023965) | 71429..71587 | - | 159 | WP_001644829.1 | hypothetical protein | - |
| DAY16_RS23975 (DAY16_023970) | 71812..72465 | + | 654 | WP_024153778.1 | DUF5710 domain-containing protein | - |
| DAY16_RS23980 (DAY16_023975) | 73112..74410 | + | 1299 | WP_024153777.1 | hypothetical protein | - |
| DAY16_RS23985 (DAY16_023980) | 74501..75520 | + | 1020 | WP_024153776.1 | thioredoxin fold domain-containing protein | - |
| DAY16_RS23990 (DAY16_023985) | 75507..77702 | + | 2196 | WP_024153775.1 | hypothetical protein | VF |
| DAY16_RS23995 (DAY16_023990) | 77761..78300 | + | 540 | WP_026037017.1 | Phospholipase D | VF |
| DAY16_RS24000 (DAY16_023995) | 78395..78958 | + | 564 | WP_023230347.1 | DUF2913 family protein | - |
| DAY16_RS24005 (DAY16_024000) | 79527..80123 | - | 597 | WP_000928861.1 | dienelactone hydrolase family protein | - |
| DAY16_RS24010 (DAY16_024005) | 80864..81817 | + | 954 | WP_058644968.1 | Recombination-promoting nuclease RpnA | VF |
| DAY16_RS24015 (DAY16_024010) | 81945..82235 | - | 291 | WP_023228541.1 | hypothetical protein | - |
| DAY16_RS24020 (DAY16_024015) | 82777..83025 | + | 249 | Protein_80 | Recombination-promoting nuclease RpnD | VF |
| DAY16_RS24025 (DAY16_024020) | 83317..85506 | - | 2190 | WP_042836859.1 | Ferric enterobactin receptor | VF |
| DAY16_RS24030 (DAY16_024025) | 85767..86015 | + | 249 | Protein_82 | hypothetical protein | VF |
| DAY16_RS24035 (DAY16_024030) | 86271..86735 | + | 465 | WP_042836857.1 | DUF302 domain-containing protein | - |
| DAY16_RS24040 (DAY16_024035) | 86731..87018 | + | 288 | Protein_84 | Rpn family recombination-promoting nuclease/putative transposase | - |
| DAY16_RS24045 (DAY16_024040) | 87401..89050 | + | 1650 | WP_024153771.1 | Methyl-accepting chemotaxis protein IV | VF |
| DAY16_RS24050 (DAY16_024045) | 89159..91114 | - | 1956 | WP_024153770.1 | Protein TraI | Relaxase |
| DAY16_RS24055 (DAY16_024050) | 91117..91422 | - | 306 | WP_000045230.1 | plasmid mobilization protein MobA | - |
| DAY16_RS24060 (DAY16_024055) | 91705..92016 | + | 312 | WP_024153769.1 | hypothetical protein | - |
| DAY16_RS24065 (DAY16_024060) | 92181..93014 | - | 834 | WP_000113357.1 | DUF932 domain-containing protein | - |
| DAY16_RS24070 (DAY16_024065) | 93143..93430 | + | 288 | WP_070799686.1 | hypothetical protein | - |
| DAY16_RS24075 (DAY16_024070) | 93524..93793 | + | 270 | WP_000148351.1 | hypothetical protein | - |
| DAY16_RS24080 (DAY16_024075) | 94039..95712 | - | 1674 | WP_070794376.1 | group II intron reverse transcriptase/maturase | - |
| DAY16_RS24085 (DAY16_024080) | 96269..96448 | - | 180 | WP_024153766.1 | type I toxin-antitoxin system Hok family toxin | - |
| DAY16_RS24090 (DAY16_024085) | 96652..96978 | - | 327 | WP_024153765.1 | hypothetical protein | - |
| DAY16_RS24095 (DAY16_024090) | 96975..97703 | - | 729 | WP_024153764.1 | plasmid SOS inhibition protein A | - |
| DAY16_RS24100 (DAY16_024095) | 97700..98134 | - | 435 | WP_077909245.1 | conjugation system SOS inhibitor PsiB | - |
| DAY16_RS24105 (DAY16_024100) | 98175..100220 | - | 2046 | WP_024153763.1 | ParB/RepB/Spo0J family partition protein | - |
| DAY16_RS24110 (DAY16_024105) | 100292..100534 | - | 243 | WP_001628022.1 | DUF905 domain-containing protein | - |
| DAY16_RS24115 (DAY16_024110) | 100589..101134 | - | 546 | WP_024153762.1 | single-stranded DNA-binding protein SSB2 | - |
| DAY16_RS24120 (DAY16_024115) | 101115..101423 | - | 309 | WP_024153761.1 | hypothetical protein | - |
| DAY16_RS24125 (DAY16_024120) | 101433..101831 | - | 399 | WP_070800358.1 | hypothetical protein | - |
| DAY16_RS24130 (DAY16_024125) | 101859..102422 | - | 564 | WP_024153760.1 | class I SAM-dependent methyltransferase | - |
| DAY16_RS24135 (DAY16_024130) | 102469..103815 | - | 1347 | WP_024153759.1 | DUF3560 domain-containing protein | - |
| DAY16_RS24140 (DAY16_024135) | 103903..104133 | - | 231 | WP_024153758.1 | hypothetical protein | - |
| DAY16_RS24145 (DAY16_024140) | 104225..104452 | - | 228 | WP_024153757.1 | hypothetical protein | - |
| DAY16_RS24795 | 104756..104903 | + | 148 | Protein_106 | hypothetical protein | - |
| DAY16_RS24150 (DAY16_024145) | 104843..105028 | + | 186 | WP_094137830.1 | hypothetical protein | - |
| DAY16_RS24155 (DAY16_024150) | 105181..105472 | - | 292 | Protein_108 | DNA polymerase III subunit theta | - |
| DAY16_RS24160 (DAY16_024155) | 105643..105834 | - | 192 | WP_001022400.1 | hypothetical protein | - |
| DAY16_RS24165 (DAY16_024160) | 105849..106259 | - | 411 | WP_024136731.1 | hypothetical protein | - |
| DAY16_RS24170 (DAY16_024165) | 106304..106726 | - | 423 | WP_001658277.1 | DUF1380 family protein | - |
| DAY16_RS24175 (DAY16_024170) | 106794..107222 | - | 429 | WP_024153629.1 | antirestriction protein | - |
| DAY16_RS24180 (DAY16_024175) | 107643..108410 | - | 768 | WP_024153630.1 | membrane protein | - |
| DAY16_RS24185 (DAY16_024180) | 108478..108882 | - | 405 | WP_001644938.1 | DUF1380 family protein | - |
| DAY16_RS24190 (DAY16_024185) | 108939..109358 | - | 420 | WP_024153631.1 | DUF1380 family protein | - |
| DAY16_RS24195 (DAY16_024190) | 109370..109591 | - | 222 | WP_001644940.1 | hypothetical protein | - |
| DAY16_RS24200 (DAY16_024195) | 109591..110271 | - | 681 | WP_001644941.1 | DNA methylase | - |
| DAY16_RS24205 (DAY16_024200) | 110648..110995 | - | 348 | WP_001644943.1 | hypothetical protein | - |
| DAY16_RS24210 (DAY16_024205) | 111028..111858 | - | 831 | Protein_119 | DUF1281 domain-containing protein | - |
| DAY16_RS24215 (DAY16_024210) | 111881..112652 | + | 772 | Protein_120 | translesion error-prone DNA polymerase V subunit UmuC | - |
| DAY16_RS24220 (DAY16_024215) | 112734..113708 | - | 975 | WP_001644948.1 | ParB family protein | - |
| DAY16_RS24225 (DAY16_024220) | 113708..114913 | - | 1206 | WP_001644949.1 | AAA family ATPase | - |
| DAY16_RS24230 (DAY16_024225) | 115161..115781 | + | 621 | WP_001644950.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| DAY16_RS24235 (DAY16_024230) | 115917..116612 | + | 696 | WP_024153690.1 | IS6 family transposase | - |
| DAY16_RS24800 | 116666..116866 | + | 201 | Protein_125 | Lrp/AsnC family transcriptional regulator | - |
| DAY16_RS24240 (DAY16_024235) | 117008..117424 | - | 417 | WP_001644958.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| DAY16_RS24245 (DAY16_024240) | 117421..117651 | - | 231 | WP_001644959.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| DAY16_RS24250 (DAY16_024245) | 118084..118347 | + | 264 | WP_024153651.1 | hypothetical protein | - |
| DAY16_RS24255 (DAY16_024250) | 118400..118789 | - | 390 | Protein_129 | IS3 family transposase | - |
| DAY16_RS24260 (DAY16_024255) | 118936..121746 | - | 2811 | WP_070812003.1 | Outer membrane protein IcsA autotransporter | VF |
| DAY16_RS24265 (DAY16_024260) | 122067..122306 | + | 240 | Protein_131 | RNA 2'-phosphotransferase | - |
| DAY16_RS24805 | 122742..123239 | + | 498 | WP_223156239.1 | hypothetical protein | - |
| DAY16_RS24275 (DAY16_024270) | 123241..123831 | + | 591 | WP_042836735.1 | DUF2913 family protein | - |
| DAY16_RS24810 | 124078..124209 | + | 132 | WP_254889306.1 | hypothetical protein | - |
| DAY16_RS24280 (DAY16_024275) | 124256..124951 | + | 696 | WP_024153690.1 | IS6 family transposase ISEas1 | Transposase |
| DAY16_RS24285 (DAY16_024280) | 125307..126248 | + | 942 | WP_042836637.1 | Recombination-promoting nuclease RpnA | VF |
| DAY16_RS24290 (DAY16_024285) | 126245..126860 | - | 616 | Protein_137 | DUF2913 family protein | - |
| DAY16_RS24295 (DAY16_024290) | 126857..127252 | - | 396 | WP_001642926.1 | hypothetical protein | - |
| DAY16_RS24300 (DAY16_024295) | 127305..128075 | - | 771 | WP_240494982.1 | 3'-5' exonuclease | - |
| DAY16_RS24305 (DAY16_024300) | 128161..129276 | - | 1116 | WP_001644081.1 | DNA-binding protein | - |
| DAY16_RS24310 (DAY16_024305) | 129515..130003 | + | 489 | WP_024153653.1 | hypothetical protein | - |
| DAY16_RS24815 | 130077..130640 | - | 564 | WP_070794405.1 | hypothetical protein | - |
| DAY16_RS24320 (DAY16_024315) | 130959..131132 | - | 174 | WP_023230112.1 | hypothetical protein | - |
| DAY16_RS24325 (DAY16_024320) | 131604..133703 | - | 2100 | WP_086375341.1 | peptidase domain-containing ABC transporter | - |
| DAY16_RS24330 (DAY16_024325) | 133705..134982 | - | 1278 | WP_001644073.1 | HlyD family secretion protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|