MGE detailed information
MGE type: Prophage MGE length: 55020 bp
Accession: NZ_CP077699 Location: 2082753..2137772 Organism: Salmonella enterica subsp. enterica strain CFSAN058591 Replicon: chromosome
Accession: NZ_CP077699 Location: 2082753..2137772 Organism: Salmonella enterica subsp. enterica strain CFSAN058591 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DAY16_RS09945 () | 2078336..2078788 | + | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
| DAY16_RS09950 () | 2078818..2079558 | + | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| DAY16_RS09955 () | 2079595..2080116 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| DAY16_RS09960 () | 2080118..2080717 | - | 600 | WP_000716750.1 | YebB family permuted papain-like enzyme | - |
| DAY16_RS09965 () | 2080926..2081618 | + | 693 | WP_023217397.1 | hypothetical protein | - |
| DAY16_RS09970 () | 2082133..2082744 | + | 612 | WP_000580333.1 | Holliday junction branch migration protein RuvA | - |
| DAY16_RS09975 () | 2082753..2083763 | + | 1011 | WP_000568502.1 | Holliday junction branch migration DNA helicase RuvB | - |
| DAY16_RS09980 () | 2083842..2084627 | - | 786 | WP_000571508.1 | Processive diacylglycerol beta-glucosyltransferase | VF |
| DAY16_RS09985 () | 2084624..2085379 | - | 756 | WP_070794233.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| DAY16_RS09990 () | 2085458..2086402 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| DAY16_RS09995 () | 2086418..2087737 | + | 1320 | WP_001184030.1 | murein DD-endopeptidase MepM | - |
| DAY16_RS10000 () | 2087854..2088825 | + | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| DAY16_RS10005 () | 2088898..2090340 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| DAY16_RS10010 () | 2090464..2091333 | - | 870 | WP_001056719.1 | MurR/RpiR family transcriptional regulator | - |
| DAY16_RS10015 () | 2091675..2093150 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| DAY16_RS10020 () | 2093385..2095196 | + | 1812 | WP_001069118.1 | phosphogluconate dehydratase | - |
| DAY16_RS10025 () | 2095234..2095875 | + | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| DAY16_RS10030 () | 2095975..2097153 | - | 1179 | WP_000173437.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| DAY16_RS10035 () | 2097284..2097574 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| DAY16_RS10040 () | 2097642..2097995 | + | 354 | WP_001042123.1 | protein YebF | - |
| DAY16_RS10045 () | 2098089..2098748 | + | 660 | WP_000024707.1 | tellurite resistance TerB family protein | - |
| DAY16_RS10050 () | 2098961..2101012 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| DAY16_RS10055 () | 2101049..2101747 | - | 699 | WP_000944280.1 | exodeoxyribonuclease X | - |
| DAY16_RS10060 () | 2101771..2102427 | - | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| DAY16_RS10065 () | 2102534..2102764 | - | 231 | WP_000856225.1 | DNA polymerase III subunit theta | - |
| DAY16_RS10070 () | 2102902..2103276 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| DAY16_RS10075 () | 2103277..2104152 | + | 876 | WP_000979696.1 | copper homeostasis membrane protein CopD | - |
| DAY16_RS10080 () | 2104169..2104522 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2104624..2104767 | - | 144 | - | - | Antitoxin Detail |
| - | 2104662..2104765 | + | 104 | - | - | Toxin Detail |
| DAY16_RS10085 () | 2104905..2105984 | - | 1080 | Protein_1980 | phage integrase Arm DNA-binding domain-containing protein | - |
| DAY16_RS10090 () | 2106017..2107165 | - | 1149 | Protein_1981 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| DAY16_RS10095 () | 2107157..2107405 | + | 249 | Protein_1982 | glycoside hydrolase family 19 protein | - |
| DAY16_RS10100 () | 2107402..2107935 | + | 534 | WP_001529209.1 | DUF2514 domain-containing protein | - |
| DAY16_RS10105 () | 2108204..2108371 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| DAY16_RS10110 () | 2108674..2109165 | + | 492 | WP_001629197.1 | DUF1441 family protein | - |
| DAY16_RS10115 () | 2109257..2109719 | + | 463 | Protein_1986 | phage terminase large subunit family protein | - |
| DAY16_RS10120 () | 2109760..2110698 | + | 939 | Protein_1987 | tail fiber protein | - |
| DAY16_RS24610 () | 2110699..2111046 | + | 348 | Protein_1988 | tail assembly chaperone | - |
| DAY16_RS10125 () | 2111143..2111343 | - | 201 | WP_031615635.1 | PagK family vesicle-borne virulence factor | - |
| DAY16_RS24615 () | 2111733..2111913 | - | 181 | Protein_1990 | IS3 family transposase | - |
| DAY16_RS10130 () | 2111904..2112005 | + | 102 | Protein_1991 | arsenic transporter | - |
| DAY16_RS24620 () | 2112627..2112859 | + | 233 | Protein_1992 | helix-turn-helix domain-containing protein | - |
| DAY16_RS10145 () | 2113186..2113800 | - | 615 | WP_058344224.1 | disulfide bond formation protein B | - |
| DAY16_RS10150 () | 2113810..2113968 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| DAY16_RS10155 () | 2114101..2115015 | - | 915 | WP_001233453.1 | DMT family transporter | - |
| DAY16_RS10160 () | 2115807..2116426 | - | 620 | Protein_1996 | fimbrial protein | - |
| DAY16_RS10165 () | 2116365..2116526 | + | 162 | Protein_1997 | IS256 family transposase IS285 | Transposase |
| DAY16_RS10170 () | 2116536..2117064 | + | 529 | Protein_1998 | IS256 family transposase ISEc39 | Transposase |
| DAY16_RS10175 () | 2117210..2117350 | - | 141 | WP_001576018.1 | hypothetical protein | - |
| DAY16_RS10180 () | 2117516..2117785 | - | 270 | WP_077909932.1 | hypothetical protein | - |
| DAY16_RS10185 () | 2118154..2118573 | + | 420 | WP_000354406.1 | GNAT family N-acetyltransferase | - |
| DAY16_RS10190 () | 2118702..2119178 | - | 477 | WP_001529212.1 | hypothetical protein | - |
| DAY16_RS10195 () | 2119507..2119902 | - | 396 | WP_000422881.1 | DUF1398 domain-containing protein | - |
| DAY16_RS10200 () | 2120586..2121308 | + | 723 | WP_000182069.1 | Acetyl-coenzyme A synthetase | VF |
| DAY16_RS10205 () | 2121593..2121757 | + | 165 | WP_001134850.1 | hypothetical protein | - |
| DAY16_RS10210 () | 2121981..2122631 | + | 651 | WP_058344223.1 | protein-serine/threonine phosphatase | - |
| DAY16_RS10215 () | 2122650..2122841 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| DAY16_RS10220 () | 2122952..2123188 | - | 237 | WP_024131167.1 | YebV family protein | - |
| DAY16_RS10225 () | 2123305..2124744 | - | 1440 | WP_058344257.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| DAY16_RS10230 () | 2124822..2127455 | - | 2634 | WP_001644112.1 | Lipoprotein-releasing system transmembrane protein LolE | VF |
| DAY16_RS10235 () | 2127424..2128707 | - | 1284 | WP_001207293.1 | membrane integrity lipid transport subunit YebS | - |
| DAY16_RS10240 () | 2128836..2129333 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| DAY16_RS10245 () | 2129431..2130117 | + | 687 | WP_023207867.1 | RNA chaperone ProQ | - |
| DAY16_RS10250 () | 2130137..2132185 | + | 2049 | WP_023207866.1 | carboxy terminal-processing peptidase | - |
| DAY16_RS10255 () | 2132379..2133260 | + | 882 | WP_000984498.1 | protease HtpX | - |
| DAY16_RS10260 () | 2133308..2134681 | - | 1374 | WP_000416142.1 | MFS transporter | - |
| DAY16_RS10265 () | 2134857..2135648 | + | 792 | WP_001262196.1 | DNA-binding transcriptional regulator KdgR | - |
| DAY16_RS10270 () | 2135860..2136099 | - | 240 | WP_001236778.1 | invasion protein YobH | - |
| DAY16_RS10275 () | 2136257..2136400 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| DAY16_RS10280 () | 2136471..2136758 | + | 288 | WP_001000660.1 | YebO family protein | - |
| DAY16_RS10285 () | 2137407..2137550 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| DAY16_RS10290 () | 2137563..2137772 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| DAY16_RS10295 () | 2137992..2139737 | + | 1746 | WP_058344220.1 | peptidoglycan glycosyltransferase FtsI | - |
| DAY16_RS10300 () | 2139803..2140612 | + | 810 | WP_058344219.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| DAY16_RS10305 () | 2140609..2141175 | - | 567 | WP_023207864.1 | manganese efflux pump MntP | - |
| DAY16_RS10310 () | 2141585..2142043 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|