MGE detailed information
MGE type: Prophage MGE length: 37284 bp
Accession: NZ_CP077699 Location: 1277730..1315013 Organism: Salmonella enterica subsp. enterica strain CFSAN058591 Replicon: chromosome
Accession: NZ_CP077699 Location: 1277730..1315013 Organism: Salmonella enterica subsp. enterica strain CFSAN058591 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DAY16_RS06070 (1273289) | 1273289..1273630 | - | 342 | WP_024154283.1 | helix-turn-helix transcriptional regulator | - |
| DAY16_RS06075 (1273743) | 1273743..1274243 | + | 501 | WP_024154284.1 | transcriptional regulator | - |
| DAY16_RS06080 (1274286) | 1274286..1274888 | + | 603 | WP_070794186.1 | helix-turn-helix domain-containing protein | - |
| DAY16_RS06085 (1275459) | 1275459..1275905 | - | 447 | WP_070800714.1 | hypothetical protein | - |
| DAY16_RS06090 (1275922) | 1275922..1276074 | - | 153 | WP_165801004.1 | hypothetical protein | - |
| DAY16_RS06095 (1276199) | 1276199..1276393 | + | 195 | WP_070800713.1 | hypothetical protein | - |
| DAY16_RS06100 (1276390) | 1276390..1276581 | + | 192 | WP_070800712.1 | hypothetical protein | - |
| DAY16_RS06105 (1276968) | 1276968..1277612 | + | 645 | WP_077979392.1 | ash family protein | - |
| DAY16_RS06110 (1277857) | 1277857..1278435 | + | 579 | WP_070794191.1 | 3'-5' exonuclease | - |
| DAY16_RS06115 (1278437) | 1278437..1278661 | + | 225 | WP_070794192.1 | hypothetical protein | - |
| DAY16_RS06120 (1278658) | 1278658..1280949 | + | 2292 | WP_070809059.1 | hypothetical protein | - |
| DAY16_RS06125 (1280946) | 1280946..1281341 | + | 396 | WP_070809060.1 | DUF977 family protein | - |
| DAY16_RS06130 (1281338) | 1281338..1281586 | + | 249 | WP_058645051.1 | hypothetical protein | - |
| DAY16_RS06135 (1281590) | 1281590..1282102 | + | 513 | WP_254679738.1 | hypothetical protein | - |
| DAY16_RS06140 (1282099) | 1282099..1282329 | + | 231 | WP_023136568.1 | hypothetical protein | - |
| DAY16_RS06145 (1282326) | 1282326..1282928 | + | 603 | WP_070804843.1 | ead/Ea22-like family protein | - |
| DAY16_RS06150 (1282928) | 1282928..1283107 | + | 180 | WP_023229813.1 | hypothetical protein | - |
| DAY16_RS06155 (1283341) | 1283341..1283910 | + | 570 | WP_058645055.1 | DUF550 domain-containing protein | - |
| DAY16_RS06160 (1283913) | 1283913..1284176 | + | 264 | WP_058645056.1 | DUF4222 domain-containing protein | - |
| DAY16_RS06165 (1284647) | 1284647..1284874 | + | 228 | WP_058645057.1 | hypothetical protein | - |
| DAY16_RS06170 (1284953) | 1284953..1286896 | + | 1944 | WP_070810084.1 | replication endonuclease | - |
| DAY16_RS06175 (1287048) | 1287048..1287329 | + | 282 | WP_108451050.1 | hypothetical protein | - |
| DAY16_RS06180 (1287352) | 1287352..1288488 | + | 1137 | WP_070799698.1 | DUF968 domain-containing protein | - |
| DAY16_RS06185 (1288485) | 1288485..1289147 | + | 663 | WP_070810083.1 | bacteriophage antitermination protein Q | - |
| DAY16_RS06190 (1289411) | 1289411..1289671 | + | 261 | WP_070799696.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DAY16_RS06195 (1289739) | 1289739..1290113 | + | 375 | WP_070799695.1 | helix-turn-helix transcriptional regulator | - |
| DAY16_RS06200 (1290263) | 1290263..1290670 | + | 408 | WP_070810082.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| DAY16_RS06205 (1290840) | 1290840..1291148 | + | 309 | WP_000177621.1 | HP1 family phage holin | - |
| DAY16_RS06210 (1291126) | 1291126..1291665 | + | 540 | WP_070810081.1 | lysozyme | - |
| DAY16_RS06215 (1291894) | 1291894..1292031 | + | 138 | WP_024154134.1 | hypothetical protein | - |
| DAY16_RS06220 (1292033) | 1292033..1292515 | + | 483 | WP_070810080.1 | lysis protein | - |
| DAY16_RS06225 (1292740) | 1292740..1293273 | + | 534 | WP_024154132.1 | DUF1441 family protein | - |
| DAY16_RS06230 (1293233) | 1293233..1295368 | + | 2136 | WP_077958054.1 | phage terminase large subunit family protein | - |
| DAY16_RS06235 (1295365) | 1295365..1295571 | + | 207 | WP_058645084.1 | hypothetical protein | - |
| DAY16_RS06240 (1295568) | 1295568..1297115 | + | 1548 | WP_070794204.1 | phage portal protein | - |
| DAY16_RS06245 (1297039) | 1297039..1299120 | + | 2082 | WP_077958053.1 | hypothetical protein | VF |
| DAY16_RS06250 (1299211) | 1299211..1299534 | + | 324 | WP_070810078.1 | DUF2190 family protein | - |
| DAY16_RS06255 (1299527) | 1299527..1299817 | + | 291 | WP_070810077.1 | ATP-binding protein | - |
| DAY16_RS06260 (1299807) | 1299807..1300370 | + | 564 | WP_070794206.1 | phage tail protein | - |
| DAY16_RS06265 (1300367) | 1300367..1300771 | + | 405 | WP_058645079.1 | phage minor tail U family protein | - |
| DAY16_RS06270 (1300783) | 1300783..1301544 | + | 762 | WP_058645078.1 | Ig domain-containing protein | - |
| DAY16_RS06275 (1301593) | 1301593..1301991 | + | 399 | WP_058645077.1 | phage minor tail protein G | - |
| DAY16_RS06280 (1302012) | 1302012..1302317 | + | 306 | WP_070794207.1 | phage tail assembly protein T | - |
| DAY16_RS06285 (1302298) | 1302298..1305405 | + | 3108 | WP_259407087.1 | phage tail tape measure protein | - |
| DAY16_RS06290 (1305402) | 1305402..1305734 | + | 333 | WP_023261951.1 | phage tail protein | - |
| DAY16_RS06295 (1305872) | 1305872..1307035 | + | 1164 | WP_220571659.1 | porin OmpC | - |
| DAY16_RS06300 (1307190) | 1307190..1307885 | + | 696 | WP_023261949.1 | phage minor tail protein L | - |
| DAY16_RS06305 (1307895) | 1307895..1308638 | + | 744 | WP_024154110.1 | C40 family peptidase | - |
| DAY16_RS06310 (1308536) | 1308536..1309243 | + | 708 | WP_031604554.1 | tail assembly protein | - |
| DAY16_RS06315 (1309314) | 1309314..1312727 | + | 3414 | WP_259407461.1 | host specificity protein J | - |
| DAY16_RS06320 (1312794) | 1312794..1313228 | - | 435 | WP_058645148.1 | transcriptional regulator | Antitoxin Detail |
| DAY16_RS06325 (1313257) | 1313257..1313439 | - | 183 | WP_070800844.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| DAY16_RS06330 (1313528) | 1313528..1314409 | + | 882 | WP_070794208.1 | prophage tail fiber N-terminal domain-containing protein | - |
| DAY16_RS06335 (1314420) | 1314420..1315013 | + | 594 | WP_070804872.1 | DUF4376 domain-containing protein | - |
| DAY16_RS06340 (1315121) | 1315121..1315495 | + | 375 | WP_058645172.1 | DUF1353 domain-containing protein | - |
| DAY16_RS06345 (1315772) | 1315772..1316035 | - | 264 | WP_058645171.1 | hypothetical protein | - |
| DAY16_RS06350 (1316035) | 1316035..1316877 | - | 843 | WP_259407089.1 | S-type pyocin domain-containing protein | - |
| DAY16_RS24580 (1316893) | 1316893..1318149 | - | 1257 | WP_259407090.1 | colicin-like bacteriocin tRNase domain-containing protein | - |
| DAY16_RS06360 (1318358) | 1318358..1318513 | + | 156 | WP_165801011.1 | hypothetical protein | - |
| DAY16_RS06365 (1318896) | 1318896..1319234 | - | 339 | WP_000178449.1 | ribosome-associated translation inhibitor RaiA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|