MGE detailed information
MGE type: Conjugative plasmid MGE length: 137153 bp
Accession: NZ_CP077694 Location: 1..137153 Organism: Salmonella enterica subsp. enterica strain CFSAN058605 Replicon: plasmid pCFSAN058605_01
Accession: NZ_CP077694 Location: 1..137153 Organism: Salmonella enterica subsp. enterica strain CFSAN058605 Replicon: plasmid pCFSAN058605_01
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DAY14_RS24915 (DAY14_024920) | 1265..2005 | - | 741 | WP_001066959.1 | tyrosine-type recombinase/integrase | - |
| DAY14_RS24920 (DAY14_024925) | 3057..3911 | + | 855 | WP_001644065.1 | AraC family transcriptional regulator | - |
| DAY14_RS24930 (DAY14_024935) | 6493..6786 | + | 294 | WP_024153544.1 | hypothetical protein | - |
| DAY14_RS24935 (DAY14_024940) | 7538..7939 | + | 402 | WP_230319598.1 | CaiF/GrlA family transcriptional regulator | - |
| DAY14_RS24940 (DAY14_024945) | 7932..8687 | + | 756 | WP_023230123.1 | transcriptional activator SprB | - |
| DAY14_RS24945 (DAY14_024950) | 9413..9529 | + | 117 | Protein_7 | IS3 family transposase IS1351 | Transposase |
| DAY14_RS24950 (DAY14_024955) | 9755..10763 | - | 1009 | Protein_8 | IS110 family transposase ISSaen1 | Transposase |
| DAY14_RS24960 (DAY14_024965) | 11027..11428 | - | 402 | WP_001644747.1 | phage holin family protein | - |
| DAY14_RS24965 (DAY14_024970) | 11572..11925 | - | 354 | WP_001644748.1 | hypothetical protein | - |
| DAY14_RS24970 (DAY14_024975) | 11978..12226 | - | 249 | WP_108443152.1 | DUF883 family protein | - |
| DAY14_RS24975 (DAY14_024980) | 12631..12984 | + | 354 | WP_001644748.1 | hypothetical protein | - |
| DAY14_RS24980 (DAY14_024985) | 13128..13529 | + | 402 | WP_001644747.1 | phage holin family protein | - |
| DAY14_RS24985 (DAY14_024990) | 13526..13819 | + | 294 | WP_079905948.1 | YqjK family protein | - |
| DAY14_RS26060 | 13925..14146 | - | 222 | Protein_15 | sprT domain-containing protein | - |
| DAY14_RS24990 (DAY14_024995) | 14516..14797 | - | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| DAY14_RS24995 (DAY14_025000) | 14778..15107 | - | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DAY14_RS26065 | 15481..15828 | + | 348 | WP_253185255.1 | UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase | VF |
| DAY14_RS26070 | 15852..16352 | + | 501 | Protein_19 | DegT/DnrJ/EryC1/StrS family aminotransferase | - |
| DAY14_RS25005 (DAY14_025010) | 16372..16603 | - | 232 | Protein_20 | IS6 family transposase | - |
| DAY14_RS25010 (DAY14_025015) | 16859..17125 | + | 267 | WP_024153813.1 | hypothetical protein | - |
| DAY14_RS26075 | 18099..18275 | - | 177 | WP_230319613.1 | fimbria/pilus outer membrane usher protein | - |
| DAY14_RS25020 (DAY14_025025) | 18607..18957 | - | 351 | Protein_23 | alpha/beta hydrolase | - |
| DAY14_RS25025 (DAY14_025030) | 19010..23542 | - | 4533 | WP_024153811.1 | Hemolysin | VF |
| DAY14_RS25030 (DAY14_025035) | 23588..25258 | - | 1671 | WP_024153810.1 | Hemolysin transporter protein ShlB | VF |
| DAY14_RS25035 (DAY14_025040) | 25677..26165 | - | 489 | WP_023230137.1 | hypothetical protein | - |
| DAY14_RS25040 (DAY14_025045) | 26184..27014 | - | 831 | WP_223156232.1 | Outer membrane protein A | VF |
| DAY14_RS25045 (DAY14_025050) | 27068..32107 | - | 5040 | WP_077957288.1 | YadA-like family protein | - |
| DAY14_RS25050 (DAY14_025055) | 33822..34840 | - | 1019 | Protein_29 | plasmid replication initiator RepA | - |
| DAY14_RS25055 (DAY14_025060) | 35786..36331 | + | 546 | WP_024153807.1 | transcription termination factor NusG | - |
| DAY14_RS25060 (DAY14_025065) | 36513..37169 | + | 657 | WP_023229167.1 | hypothetical protein | - |
| DAY14_RS25065 (DAY14_025070) | 37271..37447 | + | 177 | WP_086375328.1 | TraR/DksA C4-type zinc finger protein | - |
| DAY14_RS25070 (DAY14_025075) | 37459..37653 | + | 195 | WP_001188429.1 | hypothetical protein | - |
| DAY14_RS25075 (DAY14_025080) | 37779..38156 | + | 378 | WP_139145223.1 | hypothetical protein | - |
| DAY14_RS25080 (DAY14_025085) | 38234..39202 | + | 969 | WP_051142412.1 | hypothetical protein | VF |
| DAY14_RS25085 (DAY14_025090) | 39202..39633 | + | 432 | WP_001644787.1 | hypothetical protein | VF |
| DAY14_RS25090 (DAY14_025095) | 39648..41270 | + | 1623 | WP_077957289.1 | Outer membrane lipoprotein BfpB | VF |
| DAY14_RS25095 (DAY14_025100) | 41275..42558 | + | 1284 | WP_024153801.1 | type 4b pilus protein PilO2 | - |
| DAY14_RS25100 (DAY14_025105) | 42545..43075 | + | 531 | WP_024153800.1 | type IV pilus biogenesis protein PilP | - |
| DAY14_RS25105 (DAY14_025110) | 43107..44606 | + | 1500 | WP_001644792.1 | Type II secretion system protein E | VF |
| DAY14_RS25110 (DAY14_025115) | 44599..45714 | + | 1116 | WP_181377225.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| DAY14_RS25115 (DAY14_025120) | 45740..46333 | + | 594 | WP_024153799.1 | hypothetical protein | VF |
| DAY14_RS25120 (DAY14_025125) | 46347..46817 | + | 471 | WP_023208005.1 | hypothetical protein | VF |
| DAY14_RS25125 (DAY14_025130) | 46817..47428 | + | 612 | WP_024153798.1 | hypothetical protein | VF |
| DAY14_RS25130 (DAY14_025135) | 47527..48831 | + | 1305 | WP_042836862.1 | hypothetical protein | VF |
| DAY14_RS25135 (DAY14_025140) | 48915..49205 | - | 291 | WP_024146663.1 | hypothetical protein | - |
| DAY14_RS25140 (DAY14_025145) | 49386..50540 | + | 1155 | WP_000089546.1 | site-specific integrase | - |
| DAY14_RS25145 (DAY14_025150) | 50665..51120 | + | 456 | WP_000775487.1 | hypothetical protein | VF |
| DAY14_RS25150 (DAY14_025155) | 51186..51938 | + | 753 | WP_100218507.1 | hypothetical protein | VF |
| DAY14_RS25155 (DAY14_025160) | 51935..53104 | + | 1170 | WP_024153796.1 | putative protein YggR | VF |
| DAY14_RS25160 (DAY14_025165) | 53094..53360 | + | 267 | WP_024153795.1 | IcmT/TraK family protein | - |
| DAY14_RS25165 (DAY14_025170) | 53372..56821 | + | 3450 | WP_070799689.1 | DUF5710 domain-containing protein | - |
| DAY14_RS25170 (DAY14_025175) | 56837..57307 | + | 471 | WP_000735118.1 | hypothetical protein | - |
| DAY14_RS25175 (DAY14_025180) | 57370..58047 | + | 678 | WP_024153792.1 | hypothetical protein | VF |
| DAY14_RS25180 (DAY14_025185) | 58044..59072 | + | 1029 | WP_024153791.1 | hypothetical protein | VF |
| DAY14_RS25185 (DAY14_025190) | 59072..60274 | + | 1203 | WP_024153790.1 | hypothetical protein | VF |
| DAY14_RS25190 (DAY14_025195) | 60271..61026 | + | 756 | WP_024153789.1 | hypothetical protein | - |
| DAY14_RS25195 (DAY14_025200) | 61036..61566 | + | 531 | WP_000348307.1 | conjugal transfer protein TraQ | - |
| DAY14_RS25200 (DAY14_025205) | 61582..61980 | + | 399 | WP_000404336.1 | hypothetical protein | - |
| DAY14_RS25205 (DAY14_025210) | 62038..62490 | + | 453 | WP_024153787.1 | hypothetical protein | - |
| DAY14_RS25210 (DAY14_025215) | 62595..62897 | + | 303 | WP_024153786.1 | hypothetical protein | - |
| DAY14_RS25215 (DAY14_025220) | 62953..63561 | + | 609 | WP_024153785.1 | hypothetical protein | - |
| DAY14_RS25220 (DAY14_025225) | 63558..66620 | + | 3063 | WP_024153784.1 | conjugal transfer protein | - |
| DAY14_RS25225 (DAY14_025230) | 66639..67859 | + | 1221 | WP_024153783.1 | conjugal transfer protein TraW | - |
| DAY14_RS25230 (DAY14_025235) | 67856..68374 | + | 519 | WP_024153782.1 | conjugal transfer protein TraX | - |
| DAY14_RS25235 (DAY14_025240) | 68426..70558 | + | 2133 | WP_024153781.1 | DotA/TraY family protein | - |
| DAY14_RS25240 (DAY14_025245) | 70569..71114 | + | 546 | WP_024153780.1 | hypothetical protein | - |
| DAY14_RS25245 (DAY14_025250) | 71216..71731 | - | 516 | WP_023228531.1 | GNAT family N-acetyltransferase | - |
| DAY14_RS25250 (DAY14_025255) | 71715..72008 | - | 294 | WP_000987497.1 | DUF1778 domain-containing protein | - |
| DAY14_RS25255 (DAY14_025260) | 72097..72255 | - | 159 | WP_001644829.1 | hypothetical protein | - |
| DAY14_RS25260 (DAY14_025265) | 72480..73133 | + | 654 | WP_024153778.1 | DUF5710 domain-containing protein | - |
| DAY14_RS25265 (DAY14_025270) | 73780..75078 | + | 1299 | WP_024153777.1 | hypothetical protein | - |
| DAY14_RS25270 (DAY14_025275) | 75169..76188 | + | 1020 | WP_024153776.1 | thioredoxin fold domain-containing protein | - |
| DAY14_RS25275 (DAY14_025280) | 76175..78370 | + | 2196 | WP_024153775.1 | hypothetical protein | VF |
| DAY14_RS25280 (DAY14_025285) | 78429..78968 | + | 540 | WP_026037017.1 | Phospholipase D | VF |
| DAY14_RS25285 (DAY14_025290) | 79063..79626 | + | 564 | WP_023230347.1 | DUF2913 family protein | - |
| DAY14_RS25290 (DAY14_025295) | 80195..80791 | - | 597 | WP_000928861.1 | dienelactone hydrolase family protein | - |
| DAY14_RS25295 (DAY14_025300) | 81532..82485 | + | 954 | WP_058644968.1 | Recombination-promoting nuclease RpnA | VF |
| DAY14_RS25300 (DAY14_025305) | 82613..82903 | - | 291 | WP_023228541.1 | hypothetical protein | - |
| DAY14_RS25305 (DAY14_025310) | 83445..83693 | + | 249 | Protein_80 | Recombination-promoting nuclease RpnD | VF |
| DAY14_RS25310 (DAY14_025315) | 83985..86174 | - | 2190 | WP_042836859.1 | Ferric enterobactin receptor | VF |
| DAY14_RS25315 (DAY14_025320) | 86435..86683 | + | 249 | Protein_82 | hypothetical protein | VF |
| DAY14_RS25320 (DAY14_025325) | 86939..87403 | + | 465 | WP_042836857.1 | DUF302 domain-containing protein | - |
| DAY14_RS25325 (DAY14_025330) | 87399..87686 | + | 288 | Protein_84 | Rpn family recombination-promoting nuclease/putative transposase | - |
| DAY14_RS25330 (DAY14_025335) | 88069..89718 | + | 1650 | WP_024153771.1 | Methyl-accepting chemotaxis protein IV | VF |
| DAY14_RS25335 (DAY14_025340) | 89827..91782 | - | 1956 | WP_024153770.1 | Protein TraI | Relaxase |
| DAY14_RS25340 (DAY14_025345) | 91785..92090 | - | 306 | WP_000045230.1 | plasmid mobilization protein MobA | - |
| DAY14_RS25345 (DAY14_025350) | 92373..92684 | + | 312 | WP_024153769.1 | hypothetical protein | - |
| DAY14_RS25350 (DAY14_025355) | 92849..93682 | - | 834 | WP_000113357.1 | DUF932 domain-containing protein | - |
| DAY14_RS25355 (DAY14_025360) | 93811..94098 | + | 288 | WP_070799686.1 | hypothetical protein | - |
| DAY14_RS25360 (DAY14_025365) | 94192..94461 | + | 270 | WP_000148351.1 | hypothetical protein | - |
| DAY14_RS25365 (DAY14_025370) | 94707..96380 | - | 1674 | WP_051142410.1 | group II intron reverse transcriptase/maturase | - |
| DAY14_RS25370 (DAY14_025375) | 96937..97116 | - | 180 | WP_024153766.1 | type I toxin-antitoxin system Hok family toxin | - |
| DAY14_RS25375 (DAY14_025380) | 97320..97646 | - | 327 | WP_024153765.1 | hypothetical protein | - |
| DAY14_RS25380 (DAY14_025385) | 97643..98371 | - | 729 | WP_024153764.1 | plasmid SOS inhibition protein A | - |
| DAY14_RS25385 (DAY14_025390) | 98368..98802 | - | 435 | WP_077909245.1 | conjugation system SOS inhibitor PsiB | - |
| DAY14_RS25390 (DAY14_025395) | 98843..100888 | - | 2046 | WP_024153763.1 | ParB/RepB/Spo0J family partition protein | - |
| DAY14_RS25395 (DAY14_025400) | 100960..101202 | - | 243 | WP_001628022.1 | DUF905 domain-containing protein | - |
| DAY14_RS25400 (DAY14_025405) | 101257..101802 | - | 546 | WP_024153762.1 | single-stranded DNA-binding protein SSB2 | - |
| DAY14_RS25405 (DAY14_025410) | 101783..102091 | - | 309 | WP_024153761.1 | hypothetical protein | - |
| DAY14_RS25410 (DAY14_025415) | 102101..102499 | - | 399 | WP_070800358.1 | hypothetical protein | - |
| DAY14_RS25415 (DAY14_025420) | 102527..103090 | - | 564 | WP_024153760.1 | class I SAM-dependent methyltransferase | - |
| DAY14_RS25420 (DAY14_025425) | 103137..104483 | - | 1347 | WP_024153759.1 | DUF3560 domain-containing protein | - |
| DAY14_RS25425 (DAY14_025430) | 104571..104801 | - | 231 | WP_024153758.1 | hypothetical protein | - |
| DAY14_RS25430 (DAY14_025435) | 104893..105120 | - | 228 | WP_024153757.1 | hypothetical protein | - |
| DAY14_RS26080 | 105424..105571 | + | 148 | Protein_106 | hypothetical protein | - |
| DAY14_RS25435 (DAY14_025440) | 105511..105696 | + | 186 | WP_094137830.1 | hypothetical protein | - |
| DAY14_RS25440 (DAY14_025445) | 105861..106152 | - | 292 | Protein_108 | DNA polymerase III subunit theta | - |
| DAY14_RS25445 (DAY14_025450) | 106323..106514 | - | 192 | WP_001022400.1 | hypothetical protein | - |
| DAY14_RS25450 (DAY14_025455) | 106529..106939 | - | 411 | WP_108441236.1 | hypothetical protein | - |
| DAY14_RS25455 (DAY14_025460) | 106984..107406 | - | 423 | WP_001658277.1 | DUF1380 family protein | - |
| DAY14_RS25460 (DAY14_025465) | 107474..107902 | - | 429 | WP_024153629.1 | antirestriction protein | - |
| DAY14_RS25465 (DAY14_025470) | 108323..109090 | - | 768 | WP_024153630.1 | membrane protein | - |
| DAY14_RS25470 (DAY14_025475) | 109158..109562 | - | 405 | WP_001644938.1 | DUF1380 family protein | - |
| DAY14_RS25475 (DAY14_025480) | 109619..110038 | - | 420 | WP_024153631.1 | DUF1380 family protein | - |
| DAY14_RS25480 (DAY14_025485) | 110050..110271 | - | 222 | WP_001644940.1 | hypothetical protein | - |
| DAY14_RS25485 (DAY14_025490) | 110271..110951 | - | 681 | WP_001644941.1 | DNA methylase | - |
| DAY14_RS25490 (DAY14_025495) | 111328..111675 | - | 348 | WP_001644943.1 | hypothetical protein | - |
| DAY14_RS25495 (DAY14_025500) | 111708..112538 | - | 831 | Protein_119 | DUF1281 domain-containing protein | - |
| DAY14_RS25500 (DAY14_025505) | 112561..113332 | + | 772 | Protein_120 | translesion error-prone DNA polymerase V subunit UmuC | - |
| DAY14_RS25505 (DAY14_025510) | 113414..114388 | - | 975 | WP_001644948.1 | ParB family protein | - |
| DAY14_RS25510 (DAY14_025515) | 114388..115593 | - | 1206 | WP_001644949.1 | AAA family ATPase | - |
| DAY14_RS25515 (DAY14_025520) | 115841..116461 | + | 621 | WP_001644950.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| DAY14_RS25520 (DAY14_025525) | 116597..117292 | + | 696 | WP_024153690.1 | IS6 family transposase | - |
| DAY14_RS26085 | 117346..117546 | + | 201 | Protein_125 | Lrp/AsnC family transcriptional regulator | - |
| DAY14_RS25525 (DAY14_025530) | 117688..118104 | - | 417 | WP_001644958.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| DAY14_RS25530 (DAY14_025535) | 118101..118331 | - | 231 | WP_001644959.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| DAY14_RS25535 (DAY14_025540) | 118764..119027 | + | 264 | WP_024153651.1 | hypothetical protein | - |
| DAY14_RS25540 (DAY14_025545) | 119080..119469 | - | 390 | Protein_129 | IS3 family transposase | - |
| DAY14_RS25545 (DAY14_025550) | 119616..122405 | - | 2790 | WP_070801099.1 | Outer membrane protein IcsA autotransporter | VF |
| DAY14_RS25550 (DAY14_025555) | 122726..122965 | + | 240 | Protein_131 | RNA 2'-phosphotransferase | - |
| DAY14_RS26090 | 123401..123898 | + | 498 | WP_223156239.1 | hypothetical protein | - |
| DAY14_RS25560 (DAY14_025565) | 123900..124490 | + | 591 | WP_042836735.1 | DUF2913 family protein | - |
| DAY14_RS26095 | 124737..124868 | + | 132 | WP_254889306.1 | hypothetical protein | - |
| DAY14_RS25565 (DAY14_025570) | 124915..125610 | + | 696 | WP_024153690.1 | IS6 family transposase ISEas1 | Transposase |
| DAY14_RS25570 (DAY14_025575) | 125966..126907 | + | 942 | WP_042836637.1 | Recombination-promoting nuclease RpnA | VF |
| DAY14_RS25575 (DAY14_025580) | 126904..127519 | - | 616 | Protein_137 | DUF2913 family protein | - |
| DAY14_RS25580 (DAY14_025585) | 127516..127911 | - | 396 | WP_001642926.1 | hypothetical protein | - |
| DAY14_RS25585 (DAY14_025590) | 127964..128734 | - | 771 | WP_238707974.1 | 3'-5' exonuclease | - |
| DAY14_RS25590 (DAY14_025595) | 128820..129935 | - | 1116 | WP_001644081.1 | DNA-binding protein | - |
| DAY14_RS25595 (DAY14_025600) | 130174..130662 | + | 489 | WP_024153653.1 | hypothetical protein | - |
| DAY14_RS26100 | 130736..131299 | - | 564 | WP_070794405.1 | hypothetical protein | - |
| DAY14_RS25605 (DAY14_025610) | 131450..131614 | - | 165 | WP_153260078.1 | hypothetical protein | - |
| DAY14_RS25610 (DAY14_025615) | 131618..131791 | - | 174 | WP_023230112.1 | hypothetical protein | - |
| DAY14_RS25615 (DAY14_025620) | 132263..134362 | - | 2100 | WP_086375341.1 | peptidase domain-containing ABC transporter | - |
| DAY14_RS25620 (DAY14_025625) | 134364..135641 | - | 1278 | WP_001644073.1 | HlyD family secretion protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|