MGE detailed information
MGE type: Conjugative plasmid MGE length: 137180 bp
Accession: NZ_CP077692 Location: 1..137180 Organism: Salmonella enterica subsp. enterica strain CFSAN058620 Replicon: plasmid pCFSAN058620
Accession: NZ_CP077692 Location: 1..137180 Organism: Salmonella enterica subsp. enterica strain CFSAN058620 Replicon: plasmid pCFSAN058620
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DAX98_RS24785 (DAX98_024785) | 1265..2005 | - | 741 | WP_001066959.1 | tyrosine-type recombinase/integrase | - |
| DAX98_RS24790 (DAX98_024790) | 3057..3911 | + | 855 | WP_001644065.1 | AraC family transcriptional regulator | - |
| DAX98_RS24800 (DAX98_024800) | 6493..6786 | + | 294 | WP_024153544.1 | hypothetical protein | - |
| DAX98_RS24805 (DAX98_024805) | 7538..7939 | + | 402 | WP_230319598.1 | CaiF/GrlA family transcriptional regulator | - |
| DAX98_RS24810 (DAX98_024810) | 7932..8687 | + | 756 | WP_023230123.1 | transcriptional activator SprB | - |
| DAX98_RS24815 (DAX98_024815) | 9412..9528 | + | 117 | Protein_7 | transposase | - |
| DAX98_RS24820 (DAX98_024820) | 9754..10762 | - | 1009 | Protein_8 | IS110 family transposase | - |
| DAX98_RS24830 (DAX98_024830) | 11026..11427 | - | 402 | WP_001644747.1 | phage holin family protein | - |
| DAX98_RS24835 (DAX98_024835) | 11571..11924 | - | 354 | WP_001644748.1 | hypothetical protein | - |
| DAX98_RS24840 (DAX98_024840) | 11977..12225 | - | 249 | WP_024153731.1 | DUF883 family protein | - |
| DAX98_RS24845 (DAX98_024845) | 12630..12983 | + | 354 | WP_001644748.1 | hypothetical protein | - |
| DAX98_RS24850 (DAX98_024850) | 13127..13528 | + | 402 | WP_001644747.1 | phage holin family protein | - |
| DAX98_RS24855 (DAX98_024855) | 13525..13818 | + | 294 | WP_079905948.1 | YqjK family protein | - |
| DAX98_RS25740 | 13924..14145 | - | 222 | Protein_15 | sprT domain-containing protein | - |
| DAX98_RS24860 (DAX98_024860) | 14515..14796 | - | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| DAX98_RS24865 (DAX98_024865) | 14777..15106 | - | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DAX98_RS25745 | 15480..15827 | + | 348 | WP_253185255.1 | DegT/DnrJ/EryC1/StrS family aminotransferase | - |
| DAX98_RS25750 | 15851..16351 | + | 501 | Protein_19 | DegT/DnrJ/EryC1/StrS family aminotransferase | - |
| DAX98_RS24875 (DAX98_024875) | 16371..16602 | - | 232 | Protein_20 | IS6 family transposase | - |
| DAX98_RS24880 (DAX98_024880) | 16858..17124 | + | 267 | WP_024153813.1 | hypothetical protein | - |
| DAX98_RS25755 | 18098..18274 | - | 177 | WP_230319613.1 | fimbria/pilus outer membrane usher protein | - |
| DAX98_RS24890 (DAX98_024890) | 18606..18956 | - | 351 | Protein_23 | alpha/beta hydrolase | - |
| DAX98_RS24895 (DAX98_024895) | 19009..23541 | - | 4533 | WP_024153811.1 | hemagglutinin repeat-containing protein | - |
| DAX98_RS24900 (DAX98_024900) | 23587..25257 | - | 1671 | WP_024153810.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| DAX98_RS24905 (DAX98_024905) | 25676..26164 | - | 489 | WP_023230137.1 | hypothetical protein | - |
| DAX98_RS24910 (DAX98_024910) | 26183..27013 | - | 831 | WP_223156232.1 | outer membrane protein assembly factor BamE | - |
| DAX98_RS24915 (DAX98_024915) | 27067..32106 | - | 5040 | WP_077957288.1 | YadA-like family protein | - |
| DAX98_RS24920 (DAX98_024920) | 33821..34839 | - | 1019 | Protein_29 | plasmid replication initiator RepA | - |
| DAX98_RS24925 (DAX98_024925) | 35785..36330 | + | 546 | WP_024153807.1 | transcription termination factor NusG | - |
| DAX98_RS24930 (DAX98_024930) | 36512..37168 | + | 657 | WP_023229167.1 | hypothetical protein | - |
| DAX98_RS24935 (DAX98_024935) | 37270..37446 | + | 177 | WP_086375328.1 | TraR/DksA C4-type zinc finger protein | - |
| DAX98_RS24940 (DAX98_024940) | 37458..37652 | + | 195 | WP_001188429.1 | hypothetical protein | - |
| DAX98_RS24945 (DAX98_024945) | 37649..38155 | + | 507 | WP_024153805.1 | hypothetical protein | - |
| DAX98_RS24950 (DAX98_024950) | 38233..39201 | + | 969 | WP_051142412.1 | TcpQ domain-containing protein | - |
| DAX98_RS24955 (DAX98_024955) | 39201..39632 | + | 432 | WP_001644787.1 | type IV pilus biogenesis protein PilM | - |
| DAX98_RS24960 (DAX98_024960) | 39647..41269 | + | 1623 | WP_077957289.1 | PilN family type IVB pilus formation outer membrane protein | - |
| DAX98_RS24965 (DAX98_024965) | 41274..42557 | + | 1284 | WP_024153801.1 | type 4b pilus protein PilO2 | - |
| DAX98_RS24970 (DAX98_024970) | 42544..43074 | + | 531 | WP_024153800.1 | type IV pilus biogenesis protein PilP | - |
| DAX98_RS24975 (DAX98_024975) | 43106..44605 | + | 1500 | WP_001644792.1 | ATPase, T2SS/T4P/T4SS family | - |
| DAX98_RS24980 (DAX98_024980) | 44598..45713 | + | 1116 | WP_051142411.1 | type II secretion system F family protein | - |
| DAX98_RS24985 (DAX98_024985) | 45739..46332 | + | 594 | WP_024153799.1 | type 4 pilus major pilin | - |
| DAX98_RS24990 (DAX98_024990) | 46346..46816 | + | 471 | WP_023208005.1 | lytic transglycosylase domain-containing protein | - |
| DAX98_RS24995 (DAX98_024995) | 46816..47427 | + | 612 | WP_024153798.1 | prepilin peptidase | - |
| DAX98_RS25000 (DAX98_025000) | 47526..48830 | + | 1305 | WP_042836862.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| DAX98_RS25005 (DAX98_025005) | 48914..49204 | - | 291 | WP_024146663.1 | hypothetical protein | - |
| DAX98_RS25010 (DAX98_025010) | 49385..50539 | + | 1155 | WP_000089546.1 | site-specific integrase | - |
| DAX98_RS25015 (DAX98_025015) | 50664..51119 | + | 456 | WP_000775487.1 | DotD/TraH family lipoprotein | - |
| DAX98_RS25020 (DAX98_025020) | 51185..51937 | + | 753 | WP_100218507.1 | type IV secretory system conjugative DNA transfer family protein | - |
| DAX98_RS25025 (DAX98_025025) | 51934..53103 | + | 1170 | WP_024153796.1 | plasmid transfer ATPase TraJ | - |
| DAX98_RS25030 (DAX98_025030) | 53093..53359 | + | 267 | WP_024153795.1 | IcmT/TraK family protein | - |
| DAX98_RS25035 (DAX98_025035) | 53371..56820 | + | 3450 | WP_070799689.1 | DUF5710 domain-containing protein | - |
| DAX98_RS25040 (DAX98_025040) | 56836..57306 | + | 471 | WP_000735118.1 | hypothetical protein | - |
| DAX98_RS25045 (DAX98_025045) | 57369..58046 | + | 678 | WP_024153792.1 | DotI/IcmL/TraM family protein | - |
| DAX98_RS25050 (DAX98_025050) | 58043..59071 | + | 1029 | WP_024153791.1 | DotH/IcmK family type IV secretion protein | - |
| DAX98_RS25055 (DAX98_025055) | 59071..60273 | + | 1203 | WP_024153790.1 | conjugal transfer protein TraO | - |
| DAX98_RS25060 (DAX98_025060) | 60270..61025 | + | 756 | WP_024153789.1 | hypothetical protein | - |
| DAX98_RS25065 (DAX98_025065) | 61035..61565 | + | 531 | WP_000348307.1 | conjugal transfer protein TraQ | - |
| DAX98_RS25070 (DAX98_025070) | 61581..61979 | + | 399 | WP_000404336.1 | hypothetical protein | - |
| DAX98_RS25075 (DAX98_025075) | 62037..62489 | + | 453 | WP_024153787.1 | hypothetical protein | - |
| DAX98_RS25080 (DAX98_025080) | 62594..62896 | + | 303 | WP_024153786.1 | hypothetical protein | - |
| DAX98_RS25085 (DAX98_025085) | 62952..63560 | + | 609 | WP_024153785.1 | hypothetical protein | - |
| DAX98_RS25090 (DAX98_025090) | 63557..66619 | + | 3063 | WP_024153784.1 | conjugal transfer protein | - |
| DAX98_RS25095 (DAX98_025095) | 66638..67858 | + | 1221 | WP_024153783.1 | conjugal transfer protein TraW | - |
| DAX98_RS25100 (DAX98_025100) | 67855..68373 | + | 519 | WP_024153782.1 | conjugal transfer protein TraX | - |
| DAX98_RS25105 (DAX98_025105) | 68425..70557 | + | 2133 | WP_024153781.1 | DotA/TraY family protein | - |
| DAX98_RS25110 (DAX98_025110) | 70568..71113 | + | 546 | WP_024153780.1 | hypothetical protein | - |
| DAX98_RS25115 (DAX98_025115) | 71215..71730 | - | 516 | WP_023228531.1 | GNAT family N-acetyltransferase | - |
| DAX98_RS25120 (DAX98_025120) | 71714..72007 | - | 294 | WP_000987497.1 | DUF1778 domain-containing protein | - |
| DAX98_RS25125 (DAX98_025125) | 72096..72254 | - | 159 | WP_001644829.1 | hypothetical protein | - |
| DAX98_RS25130 (DAX98_025130) | 72479..73132 | + | 654 | WP_024153778.1 | DUF5710 domain-containing protein | - |
| DAX98_RS25135 (DAX98_025135) | 73779..75077 | + | 1299 | WP_024153777.1 | hypothetical protein | - |
| DAX98_RS25140 (DAX98_025140) | 75168..76187 | + | 1020 | WP_024153776.1 | thioredoxin fold domain-containing protein | - |
| DAX98_RS25145 (DAX98_025145) | 76174..78369 | + | 2196 | WP_024153775.1 | F-type conjugative transfer protein TrbC | - |
| DAX98_RS25150 (DAX98_025150) | 78428..78967 | + | 540 | WP_026037017.1 | phospholipase D family protein | - |
| DAX98_RS25155 (DAX98_025155) | 79062..79625 | + | 564 | WP_023230347.1 | DUF2913 family protein | - |
| DAX98_RS25160 (DAX98_025160) | 80194..80790 | - | 597 | WP_000928861.1 | dienelactone hydrolase family protein | - |
| DAX98_RS25165 (DAX98_025165) | 81531..82484 | + | 954 | WP_058644968.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| DAX98_RS25170 (DAX98_025170) | 82612..82902 | - | 291 | WP_023228541.1 | hypothetical protein | - |
| DAX98_RS25175 (DAX98_025175) | 83444..83692 | + | 249 | Protein_80 | Rpn family recombination-promoting nuclease/putative transposase | - |
| DAX98_RS25180 (DAX98_025180) | 83984..86173 | - | 2190 | WP_070811962.1 | TonB-dependent siderophore receptor | - |
| DAX98_RS25185 (DAX98_025185) | 86434..86682 | + | 249 | Protein_82 | ISNCY family transposase | - |
| DAX98_RS25190 (DAX98_025190) | 86938..87402 | + | 465 | WP_042836857.1 | DUF302 domain-containing protein | - |
| DAX98_RS25195 (DAX98_025195) | 87398..87685 | + | 288 | Protein_84 | Rpn family recombination-promoting nuclease/putative transposase | - |
| DAX98_RS25200 (DAX98_025200) | 88068..89717 | + | 1650 | WP_024153771.1 | methyl-accepting chemotaxis protein | - |
| DAX98_RS25205 (DAX98_025205) | 89826..91781 | - | 1956 | WP_024153770.1 | relaxase/mobilization nuclease domain-containing protein | - |
| DAX98_RS25210 (DAX98_025210) | 91784..92089 | - | 306 | WP_000045230.1 | plasmid mobilization protein MobA | - |
| DAX98_RS25215 (DAX98_025215) | 92372..92683 | + | 312 | WP_024153769.1 | hypothetical protein | - |
| DAX98_RS25220 (DAX98_025220) | 92848..93681 | - | 834 | WP_000113357.1 | DUF932 domain-containing protein | - |
| DAX98_RS25225 (DAX98_025225) | 93810..94097 | + | 288 | WP_070799686.1 | hypothetical protein | - |
| DAX98_RS25230 (DAX98_025230) | 94191..94460 | + | 270 | WP_000148351.1 | hypothetical protein | - |
| DAX98_RS25235 (DAX98_025235) | 94706..96379 | - | 1674 | WP_051142410.1 | group II intron reverse transcriptase/maturase | - |
| DAX98_RS25240 (DAX98_025240) | 96936..97115 | - | 180 | WP_024153766.1 | type I toxin-antitoxin system Hok family toxin | - |
| DAX98_RS25245 (DAX98_025245) | 97319..97645 | - | 327 | WP_024153765.1 | hypothetical protein | - |
| DAX98_RS25250 (DAX98_025250) | 97642..98370 | - | 729 | WP_024153764.1 | plasmid SOS inhibition protein A | - |
| DAX98_RS25255 (DAX98_025255) | 98367..98801 | - | 435 | WP_077909245.1 | conjugation system SOS inhibitor PsiB | - |
| DAX98_RS25260 (DAX98_025260) | 98842..100887 | - | 2046 | WP_024153763.1 | ParB/RepB/Spo0J family partition protein | - |
| DAX98_RS25265 (DAX98_025265) | 100959..101201 | - | 243 | WP_001628022.1 | DUF905 domain-containing protein | - |
| DAX98_RS25270 (DAX98_025270) | 101256..101801 | - | 546 | WP_024153762.1 | single-stranded DNA-binding protein SSB2 | - |
| DAX98_RS25275 (DAX98_025275) | 101782..102090 | - | 309 | WP_024153761.1 | hypothetical protein | - |
| DAX98_RS25280 (DAX98_025280) | 102100..102498 | - | 399 | WP_070800358.1 | hypothetical protein | - |
| DAX98_RS25285 (DAX98_025285) | 102526..103089 | - | 564 | WP_024153760.1 | class I SAM-dependent methyltransferase | - |
| DAX98_RS25290 (DAX98_025290) | 103136..104482 | - | 1347 | WP_024153759.1 | DUF3560 domain-containing protein | - |
| DAX98_RS25295 (DAX98_025295) | 104570..104800 | - | 231 | WP_024153758.1 | hypothetical protein | - |
| DAX98_RS25300 (DAX98_025300) | 104892..105119 | - | 228 | WP_024153757.1 | hypothetical protein | - |
| DAX98_RS25760 | 105423..105570 | + | 148 | Protein_106 | hypothetical protein | - |
| DAX98_RS25305 (DAX98_025305) | 105510..105695 | + | 186 | WP_094137830.1 | hypothetical protein | - |
| DAX98_RS25310 (DAX98_025310) | 105866..106157 | - | 292 | Protein_108 | DNA polymerase III subunit theta | - |
| DAX98_RS25315 (DAX98_025315) | 106328..106519 | - | 192 | WP_001022400.1 | hypothetical protein | - |
| DAX98_RS25320 (DAX98_025320) | 106534..106944 | - | 411 | WP_024153628.1 | hypothetical protein | - |
| DAX98_RS25325 (DAX98_025325) | 106989..107411 | - | 423 | WP_001658277.1 | DUF1380 family protein | - |
| DAX98_RS25330 (DAX98_025330) | 107479..107907 | - | 429 | WP_024153629.1 | antirestriction protein | - |
| DAX98_RS25335 (DAX98_025335) | 108328..109095 | - | 768 | WP_024153630.1 | membrane protein | - |
| DAX98_RS25340 (DAX98_025340) | 109163..109567 | - | 405 | WP_001644938.1 | DUF1380 family protein | - |
| DAX98_RS25345 (DAX98_025345) | 109624..110043 | - | 420 | WP_024153631.1 | DUF1380 family protein | - |
| DAX98_RS25350 (DAX98_025350) | 110055..110276 | - | 222 | WP_001644940.1 | hypothetical protein | - |
| DAX98_RS25355 (DAX98_025355) | 110276..110956 | - | 681 | WP_070811961.1 | DNA methylase | - |
| DAX98_RS25360 (DAX98_025360) | 111333..111680 | - | 348 | WP_001644943.1 | hypothetical protein | - |
| DAX98_RS25365 (DAX98_025365) | 111713..112543 | - | 831 | Protein_119 | DUF1281 domain-containing protein | - |
| DAX98_RS25370 (DAX98_025370) | 112566..113337 | + | 772 | Protein_120 | translesion error-prone DNA polymerase V subunit UmuC | - |
| DAX98_RS25375 (DAX98_025375) | 113419..114393 | - | 975 | WP_001644948.1 | ParB family protein | - |
| DAX98_RS25380 (DAX98_025380) | 114393..115598 | - | 1206 | WP_001644949.1 | AAA family ATPase | - |
| DAX98_RS25385 (DAX98_025385) | 115846..116466 | + | 621 | WP_001644950.1 | recombinase family protein | - |
| DAX98_RS25390 (DAX98_025390) | 116602..117297 | + | 696 | WP_024153690.1 | IS6 family transposase | - |
| DAX98_RS25765 | 117351..117551 | + | 201 | Protein_125 | Lrp/AsnC family transcriptional regulator | - |
| DAX98_RS25395 (DAX98_025395) | 117693..118109 | - | 417 | WP_001644958.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| DAX98_RS25400 (DAX98_025400) | 118106..118336 | - | 231 | WP_001644959.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| DAX98_RS25405 (DAX98_025405) | 118769..119032 | + | 264 | WP_024153651.1 | hypothetical protein | - |
| DAX98_RS25410 (DAX98_025410) | 119085..119474 | - | 390 | Protein_129 | IS3 family transposase | - |
| DAX98_RS25415 (DAX98_025415) | 119621..122431 | - | 2811 | WP_070812003.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| DAX98_RS25420 (DAX98_025420) | 122752..122991 | + | 240 | Protein_131 | RNA 2'-phosphotransferase | - |
| DAX98_RS25770 | 123427..123924 | + | 498 | WP_223156239.1 | hypothetical protein | - |
| DAX98_RS25430 (DAX98_025430) | 123926..124516 | + | 591 | WP_042836735.1 | DUF2913 family protein | - |
| DAX98_RS25775 | 124763..124894 | + | 132 | WP_254889306.1 | hypothetical protein | - |
| DAX98_RS25435 (DAX98_025435) | 124941..125636 | + | 696 | WP_024153690.1 | IS6 family transposase | - |
| DAX98_RS25440 (DAX98_025440) | 125992..126933 | + | 942 | WP_042836637.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| DAX98_RS25445 (DAX98_025445) | 126930..127545 | - | 616 | Protein_137 | DUF2913 family protein | - |
| DAX98_RS25450 (DAX98_025450) | 127542..127937 | - | 396 | WP_001642926.1 | hypothetical protein | - |
| DAX98_RS25455 (DAX98_025455) | 127990..128760 | - | 771 | WP_238707974.1 | 3'-5' exonuclease | - |
| DAX98_RS25460 (DAX98_025460) | 128846..129961 | - | 1116 | WP_001644081.1 | DNA-binding protein | - |
| DAX98_RS25465 (DAX98_025465) | 130200..130688 | + | 489 | WP_024153653.1 | hypothetical protein | - |
| DAX98_RS25780 | 130762..131325 | - | 564 | WP_070794405.1 | hypothetical protein | - |
| DAX98_RS25475 (DAX98_025475) | 131476..131640 | - | 165 | WP_153260078.1 | hypothetical protein | - |
| DAX98_RS25480 (DAX98_025480) | 131644..131817 | - | 174 | WP_023230112.1 | hypothetical protein | - |
| DAX98_RS25485 (DAX98_025485) | 132289..134388 | - | 2100 | WP_108450339.1 | peptidase domain-containing ABC transporter | - |
| DAX98_RS25490 (DAX98_025490) | 134390..135667 | - | 1278 | WP_001644073.1 | HlyD family secretion protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|