MGE detailed information
MGE type: Genomic_island MGE length: 44316 bp
Accession: NZ_CP077670 Location: 3557199..3601514 Organism: Salmonella enterica strain S90 Replicon: chromosome
Accession: NZ_CP077670 Location: 3557199..3601514 Organism: Salmonella enterica strain S90 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KTP13_RS17425 () | 3552770..3555214 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| KTP13_RS17430 () | 3555323..3556090 | + | 768 | WP_023226791.1 | amidohydrolase | - |
| KTP13_RS17435 () | 3556461..3556868 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| KTP13_RS17440 () | 3557199..3557918 | + | 720 | WP_023226792.1 | adhesin/invasin protein PagN | - |
| KTP13_RS17445 () | 3557922..3558110 | - | 189 | WP_031603649.1 | hypothetical protein | - |
| KTP13_RS17450 () | 3558146..3558279 | + | 134 | Protein_3411 | transposase | - |
| KTP13_RS17455 () | 3558881..3559498 | - | 618 | WP_023226793.1 | protein TioA | - |
| KTP13_RS17460 () | 3559638..3560093 | - | 456 | WP_000141547.1 | Lrp/AsnC family transcriptional regulator | - |
| KTP13_RS17465 () | 3560226..3561272 | - | 1047 | WP_223228889.1 | CfaE/CblD family pilus tip adhesin | - |
| KTP13_RS17470 () | 3561307..3563994 | - | 2688 | WP_023226795.1 | fimbrial outer membrane usher protein TcfC | - |
| KTP13_RS17475 () | 3564103..3564621 | - | 519 | WP_001056552.1 | fimbrial protein TcfB | - |
| KTP13_RS17480 () | 3564729..3565439 | - | 711 | WP_001009507.1 | fimbrial chaperone TcfA | - |
| KTP13_RS17485 () | 3566346..3567030 | + | 685 | Protein_3418 | IS21-like element helper ATPase IstB | - |
| KTP13_RS17490 () | 3567070..3567256 | - | 187 | Protein_3419 | transposase | - |
| KTP13_RS17495 () | 3567337..3567456 | - | 120 | Protein_3420 | hypothetical protein | - |
| KTP13_RS17500 () | 3567576..3568523 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| KTP13_RS17505 () | 3569017..3569257 | - | 241 | Protein_3422 | PerC family transcriptional regulator | - |
| KTP13_RS17510 () | 3569340..3570161 | - | 822 | WP_023209688.1 | polysaccharide deacetylase family protein | - |
| KTP13_RS17515 () | 3570569..3571039 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| KTP13_RS17520 () | 3571061..3573571 | - | 2511 | WP_053505593.1 | fimbrial biogenesis outer membrane usher protein | - |
| KTP13_RS17525 () | 3573595..3574335 | - | 741 | WP_051129375.1 | pili assembly chaperone SafB | - |
| KTP13_RS17530 () | 3574410..3574907 | - | 498 | WP_051129374.1 | Saf-pilin pilus formation protein SafA | - |
| KTP13_RS17535 () | 3575040..3575534 | - | 495 | WP_051129373.1 | hypothetical protein | - |
| KTP13_RS17540 () | 3576302..3577003 | - | 702 | Protein_3429 | integrase core domain-containing protein | - |
| KTP13_RS17545 () | 3577067..3577318 | + | 252 | WP_131166435.1 | SymE family type I addiction module toxin | Toxin Detail |
| - | 3577083..3577308 | - | 226 | - | - | Antitoxin Detail |
| KTP13_RS17550 () | 3577364..3577828 | - | 465 | WP_127201574.1 | hypothetical protein | - |
| KTP13_RS17555 () | 3578209..3579054 | - | 846 | Protein_3432 | RHS domain-containing protein | - |
| KTP13_RS17560 () | 3579074..3579211 | + | 138 | WP_023227287.1 | hypothetical protein | - |
| KTP13_RS17565 () | 3579354..3579962 | - | 609 | WP_053505599.1 | hypothetical protein | - |
| KTP13_RS17570 () | 3579963..3584087 | - | 4125 | WP_023227779.1 | RHS repeat-associated core domain-containing protein | - |
| KTP13_RS17575 () | 3584106..3584552 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
| KTP13_RS17580 () | 3584576..3586765 | - | 2190 | WP_023227778.1 | type VI secretion system Vgr family protein | - |
| KTP13_RS17585 () | 3587162..3587683 | - | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| KTP13_RS17590 () | 3587707..3588123 | - | 417 | WP_023227777.1 | DUF2195 family protein | - |
| KTP13_RS17595 () | 3588120..3588214 | - | 95 | Protein_3440 | cytoplasmic protein | - |
| KTP13_RS17600 () | 3588250..3588711 | - | 462 | WP_001668725.1 | hypothetical protein | - |
| KTP13_RS17605 () | 3588696..3589166 | - | 471 | WP_023227776.1 | glucosaminidase domain-containing protein | - |
| KTP13_RS17610 () | 3589209..3589976 | - | 768 | WP_001254127.1 | TagF domain-containing protein | - |
| KTP13_RS17615 () | 3589976..3593845 | - | 3870 | WP_023227775.1 | type VI secretion system membrane subunit TssM | - |
| KTP13_RS17620 () | 3593879..3594310 | - | 432 | WP_023166851.1 | putative Shiga-like toxin A subunit | - |
| KTP13_RS17625 () | 3594512..3595285 | - | 774 | WP_023227774.1 | Rap1a/Tai family immunity protein | - |
| KTP13_RS17630 () | 3595290..3596594 | - | 1305 | WP_000132483.1 | type VI secretion system protein TssL, long form | - |
| KTP13_RS17635 () | 3596591..3597934 | - | 1344 | WP_023227773.1 | type VI secretion system baseplate subunit TssK | - |
| KTP13_RS17640 () | 3597938..3598474 | - | 537 | WP_023227772.1 | type VI secretion system lipoprotein TssJ | - |
| KTP13_RS17645 () | 3598541..3599026 | - | 486 | WP_000119443.1 | Hcp family type VI secretion system effector | - |
| KTP13_RS17650 () | 3599169..3599552 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| KTP13_RS17655 () | 3599537..3600022 | - | 486 | WP_001081544.1 | type VI secretion system amidase effector protein Tae4 | - |
| KTP13_RS17660 () | 3600065..3600259 | - | 195 | Protein_3453 | type VI secretion system lipoprotein TssJ | - |
| KTP13_RS17665 () | 3600327..3600812 | - | 486 | WP_000312802.1 | Hcp family type VI secretion system effector | - |
| KTP13_RS17670 () | 3601068..3601400 | - | 333 | WP_077907151.1 | hypothetical protein | - |
| KTP13_RS17675 () | 3601527..3601637 | - | 111 | WP_010988967.1 | BPSL0067 family protein | - |
| KTP13_RS17680 () | 3601700..3603208 | - | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| KTP13_RS17685 () | 3603232..3603777 | - | 546 | WP_023227770.1 | type VI secretion system contractile sheath small subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|