MGE detailed information
MGE type: Conjugative plasmid MGE length: 94048 bp
Accession: NZ_CP077669 Location: 1..94048 Organism: Salmonella enterica strain SP Replicon: plasmid unnamed1
Accession: NZ_CP077669 Location: 1..94048 Organism: Salmonella enterica strain SP Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KTP12_RS24575 | 1..978 | + | 978 | WP_000361607.1 | RepB family plasmid replication initiator protein | - |
| KTP12_RS24580 | 1237..1681 | - | 445 | Protein_1 | tyrosine-type recombinase/integrase | - |
| KTP12_RS24585 | 1850..2231 | - | 382 | Protein_2 | YgiW/YdeI family stress tolerance OB fold protein | - |
| KTP12_RS24590 | 2950..3252 | + | 303 | WP_000979451.1 | Major pilu subunit operon regulatory protein PapB | VF |
| KTP12_RS24595 | 3527..4045 | + | 519 | WP_000748205.1 | hypothetical protein | VF |
| KTP12_RS24600 | 4273..6681 | + | 2409 | WP_000007893.1 | Outer membrane usher protein FimD | VF |
| KTP12_RS24605 | 6674..7366 | + | 693 | WP_001038510.1 | Chaperone protein FaeE | VF |
| KTP12_RS24610 | 7381..7938 | + | 558 | WP_010999940.1 | membrane protein | - |
| KTP12_RS24615 | 8191..9066 | + | 876 | WP_014343944.1 | hypothetical protein | - |
| KTP12_RS24620 | 9498..9710 | + | 213 | WP_000004313.1 | hypothetical protein | VF |
| KTP12_RS24625 | 9695..10045 | + | 351 | WP_001526811.1 | Transcriptional regulatory protein RcsB | VF |
| KTP12_RS24630 | 10290..10943 | + | 654 | WP_000178592.1 | DsbA family protein | - |
| KTP12_RS24635 | 10933..11079 | + | 147 | WP_001192557.1 | hypothetical protein | - |
| KTP12_RS24640 | 11076..11975 | + | 900 | WP_010999938.1 | YjiK family protein | - |
| KTP12_RS24645 | 12065..12622 | + | 558 | WP_000725062.1 | Attachment invasion locus protein | VF |
| KTP12_RS24650 | 12889..13647 | + | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| KTP12_RS24655 | 13744..13938 | - | 195 | Protein_16 | SdiA-regulated domain-containing protein | - |
| KTP12_RS24660 | 14825..15706 | - | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| KTP12_RS24665 | 15687..15764 | - | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| KTP12_RS24670 | 16014..16280 | - | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| KTP12_RS24675 | 16391..16957 | - | 567 | Protein_20 | phospholipase D family protein | - |
| KTP12_RS24680 | 17067..17183 | - | 117 | WP_001526822.1 | hypothetical protein | - |
| KTP12_RS24685 | 17235..17519 | - | 285 | WP_000477658.1 | hypothetical protein | - |
| KTP12_RS24690 | 17634..18197 | - | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| KTP12_RS24695 | 18252..18992 | - | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| KTP12_RS24700 | 19012..24270 | - | 5259 | WP_022743192.1 | Multifunctional conjugation protein TraI | Relaxase |
| KTP12_RS24705 | 24352..24579 | + | 228 | WP_000450265.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| KTP12_RS24710 | 24579..24977 | + | 399 | WP_080060985.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| KTP12_RS24715 | 24986..27256 | - | 2271 | WP_023139332.1 | type IV conjugative transfer system coupling protein TraD | - |
| KTP12_RS24720 | 27633..28364 | - | 732 | WP_022743186.1 | conjugal transfer complement resistance protein TraT | - |
| KTP12_RS24725 | 28400..28894 | - | 495 | WP_010999946.1 | entry exclusion protein | - |
| KTP12_RS24730 | 28910..31732 | - | 2823 | WP_001007086.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| KTP12_RS24735 | 31729..33111 | - | 1383 | WP_001161719.1 | conjugal transfer pilus assembly protein TraH | - |
| KTP12_RS24740 | 33101..33649 | - | 549 | WP_022743183.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| KTP12_RS24745 | 33636..33929 | - | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| KTP12_RS24750 | 34143..34892 | - | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| KTP12_RS24755 | 34904..35119 | - | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| KTP12_RS24760 | 35130..36956 | - | 1827 | WP_000827528.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| KTP12_RS24765 | 36953..37372 | - | 420 | WP_001229397.1 | HNH endonuclease signature motif containing protein | - |
| KTP12_RS24770 | 37409..38047 | - | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| KTP12_RS24775 | 38032..38340 | - | 309 | WP_010999945.1 | hypothetical protein | - |
| KTP12_RS24780 | 38359..39351 | - | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| KTP12_RS24785 | 39348..39980 | - | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| KTP12_RS24790 | 39977..40363 | - | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| KTP12_RS24795 | 40338..42986 | - | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| KTP12_RS24800 | 43002..43265 | - | 264 | WP_001239256.1 | hypothetical protein | - |
| KTP12_RS24805 | 43382..43849 | - | 468 | WP_000549562.1 | hypothetical protein | - |
| KTP12_RS24810 | 43842..44063 | - | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| KTP12_RS24815 | 44198..44713 | - | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| KTP12_RS24820 | 44710..44955 | - | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| KTP12_RS24825 | 44933..45529 | - | 597 | WP_000527896.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| KTP12_RS24830 | 45519..46940 | - | 1422 | WP_000146700.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| KTP12_RS24835 | 46940..47680 | - | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
| KTP12_RS24840 | 47667..48233 | - | 567 | WP_000399768.1 | type IV conjugative transfer system protein TraE | - |
| KTP12_RS24845 | 48255..48566 | - | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| KTP12_RS24850 | 48581..48943 | - | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| KTP12_RS24855 | 48985..49212 | - | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| KTP12_RS24860 | 49307..49993 | - | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| KTP12_RS24865 | 50186..50566 | - | 381 | WP_001151546.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| KTP12_RS24870 | 50981..51451 | + | 471 | WP_001526856.1 | hypothetical protein | VF |
| KTP12_RS24875 | 51762..52580 | - | 819 | Protein_60 | DUF945 domain-containing protein | - |
| KTP12_RS24880 | 52683..52841 | - | 159 | WP_001704449.1 | hypothetical protein | - |
| KTP12_RS25215 | 52927..53055 | - | 129 | WP_000372429.1 | hypothetical protein | - |
| KTP12_RS24885 | 53090..53827 | - | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| KTP12_RS24890 | 53824..54258 | - | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| KTP12_RS24895 | 54298..56295 | - | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| KTP12_RS24900 | 56364..56606 | - | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| KTP12_RS24905 | 56661..57179 | - | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| KTP12_RS24910 | 57773..58024 | - | 252 | WP_157763129.1 | hypothetical protein | - |
| KTP12_RS24915 | 57988..58311 | - | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| KTP12_RS24920 | 58547..58981 | - | 435 | WP_000274533.1 | DUF1380 family protein | - |
| KTP12_RS24925 | 59048..59482 | - | 435 | WP_001200150.1 | antirestriction protein | - |
| KTP12_RS24930 | 59978..60742 | - | 765 | WP_001246548.1 | membrane protein | - |
| KTP12_RS24935 | 60814..61227 | - | 414 | WP_000990114.1 | DUF1380 family protein | - |
| KTP12_RS24940 | 61283..61504 | - | 222 | WP_001109588.1 | hypothetical protein | - |
| KTP12_RS24945 | 61504..62184 | - | 681 | WP_000088645.1 | DNA methylase | - |
| KTP12_RS24950 | 62347..62628 | + | 282 | WP_146671468.1 | hypothetical protein | - |
| KTP12_RS24955 | 62566..62922 | - | 357 | WP_000369839.1 | hypothetical protein | - |
| KTP12_RS24960 | 62915..63385 | - | 471 | WP_000490265.1 | hypothetical protein | - |
| KTP12_RS24965 | 63896..64318 | + | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| KTP12_RS24970 | 64318..65592 | + | 1275 | WP_022743179.1 | Y-family DNA polymerase | - |
| KTP12_RS24975 | 65674..66648 | - | 975 | WP_000064274.1 | ParB family protein | - |
| KTP12_RS24980 | 66648..67853 | - | 1206 | WP_000427676.1 | AAA family ATPase | - |
| KTP12_RS24985 | 68268..69209 | + | 942 | WP_000728917.1 | Recombination-promoting nuclease RpnA | VF |
| KTP12_RS24990 | 69206..69807 | - | 602 | Protein_84 | DUF2913 family protein | - |
| KTP12_RS24995 | 69864..70280 | - | 417 | WP_000988946.1 | hypothetical protein | - |
| KTP12_RS25000 | 70383..70799 | - | 417 | WP_001541564.1 | hypothetical protein | - |
| KTP12_RS25005 | 70885..72000 | - | 1116 | WP_001247118.1 | DNA-binding protein | - |
| KTP12_RS25010 | 72259..72747 | + | 489 | WP_001135407.1 | hypothetical protein | - |
| KTP12_RS25015 | 73402..74142 | + | 741 | WP_001541566.1 | carbonic anhydrase family protein | - |
| KTP12_RS25020 | 74349..74909 | + | 561 | WP_001240331.1 | Tn3 family transposase ISPsy42 | Transposase |
| KTP12_RS25025 | 74893..76557 | + | 1665 | WP_000098783.1 | IS481 family transposase ISAzs36 | Transposase |
| KTP12_RS25030 | 76490..77515 | + | 1026 | WP_001576625.1 | ExeA family protein | - |
| KTP12_RS25035 | 77704..78741 | - | 1038 | WP_001121399.1 | IS630 family transposase ISEc33 | Transposase |
| KTP12_RS25040 | 79350..80243 | + | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| KTP12_RS25045 | 80417..80581 | + | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| KTP12_RS25050 | 80755..81522 | + | 768 | WP_001526990.1 | virulence protein SpvA | - |
| KTP12_RS25055 | 81485..81652 | + | 168 | WP_001526987.1 | hypothetical protein | - |
| KTP12_RS25060 | 81704..83479 | + | 1776 | WP_001676648.1 | Mono(ADP-ribosyl)transferase SpvB | VF |
| KTP12_RS25065 | 83760..84485 | + | 726 | WP_001122242.1 | MAPK phosphothreonine lyase | VF |
| KTP12_RS25070 | 84746..85396 | + | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| KTP12_RS25075 | 85523..85947 | - | 425 | Protein_101 | IS200-IS605 family transposase ISEc46 | Transposase |
| KTP12_RS25080 | 86004..86354 | + | 351 | WP_001541541.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| KTP12_RS25085 | 86421..86981 | - | 561 | WP_000900095.1 | Invasin | VF |
| KTP12_RS25090 | 87137..87424 | + | 288 | WP_071530243.1 | hypothetical protein | - |
| KTP12_RS25095 | 87701..88186 | - | 486 | WP_000905606.1 | membrane protein | - |
| KTP12_RS25100 | 88180..88668 | - | 489 | WP_001075507.1 | CaiF/GrlA family transcriptional regulator | - |
| KTP12_RS25105 | 88855..89406 | - | 552 | WP_000545754.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| KTP12_RS25110 | 89415..90197 | - | 783 | WP_000082169.1 | site-specific integrase | - |
| KTP12_RS25115 | 90232..90753 | - | 522 | WP_000198608.1 | hypothetical protein | - |
| KTP12_RS25120 | 90750..91040 | - | 291 | WP_001266176.1 | hypothetical protein | - |
| KTP12_RS25125 | 91042..91347 | - | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | - |
| KTP12_RS25130 | 91349..91567 | - | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| KTP12_RS25135 | 92243..92764 | + | 522 | WP_010999942.1 | hypothetical protein | - |
| KTP12_RS25140 | 92808..93236 | - | 429 | Protein_114 | hypothetical protein | - |
| KTP12_RS25145 | 93248..93544 | + | 297 | WP_001687482.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|